RNA–Protein interactions for RNA: ENST00000589669.1

CCDC130-211, Transcript of coiled-coil domain containing 130, humanhuman

TSL 2

Gene CCDC130, Length 701 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC130-211ENST00000589669 AEBP2Q6ZN18 517 aaPredicted RBP38.37■■■■□ 3.73
CCDC130-211ENST00000589669 CHIC1Q5VXU3 224 aa37.75■■■■□ 3.63
CCDC130-211ENST00000589669 PHF23Q9BUL5 403 aaPredicted RBP33.26■■■□□ 2.91
CCDC130-211ENST00000589669 SENP3Q9H4L4 574 aaPredicted RBP32.45■■■□□ 2.79
CCDC130-211ENST00000589669 NISCHQ9Y2I1 1504 aa32.25■■■□□ 2.75
CCDC130-211ENST00000589669 PLPPR3Q6T4P5 718 aa30.77■■■□□ 2.52
CCDC130-211ENST00000589669 FOXD1Q16676 465 aa30.11■■■□□ 2.41
CCDC130-211ENST00000589669 PPP6R1Q9UPN7 881 aa29.24■■■□□ 2.27
CCDC130-211ENST00000589669 ADRA2BP18089 450 aa29.22■■■□□ 2.27
CCDC130-211ENST00000589669 CCDC180Q9P1Z9 1646 aa28.66■■■□□ 2.18
CCDC130-211ENST00000589669 PIAS4Q8N2W9 510 aaPredicted RBP28.47■■■□□ 2.15
CCDC130-211ENST00000589669 ABCC9O60706 1549 aa28.42■■■□□ 2.14
CCDC130-211ENST00000589669 MSH5O43196 834 aa27.61■■■□□ 2.01
CCDC130-211ENST00000589669 RB1CC1Q8TDY2 1594 aa27.18■■□□□ 1.94
CCDC130-211ENST00000589669 PPP4R3CPQ6ZMV5 832 aa27.17■■□□□ 1.94
CCDC130-211ENST00000589669 DCAF8L2P0C7V8 631 aa27.16■■□□□ 1.94
CCDC130-211ENST00000589669 NACADO15069 1562 aa27.13■■□□□ 1.93
CCDC130-211ENST00000589669 MYO15BQ96JP2 1530 aa26.92■■□□□ 1.9
CCDC130-211ENST00000589669 KCNA4P22459 653 aa26.92■■□□□ 1.9
CCDC130-211ENST00000589669 ZCCHC6Q5VYS8 1495 aaKnown RBP26.75■■□□□ 1.87
CCDC130-211ENST00000589669 DCAF1Q9Y4B6 1507 aa26.68■■□□□ 1.86
CCDC130-211ENST00000589669 SCAF1Q9H7N4 1312 aaKnown RBP26.65■■□□□ 1.86
CCDC130-211ENST00000589669 PABPN1Q86U42 306 aaKnown RBP eCLIP26.6■■□□□ 1.85
CCDC130-211ENST00000589669 NCBP3Q53F19 620 aaKnown RBP26.5■■□□□ 1.83
CCDC130-211ENST00000589669 DNAJC5BQ9UF47 199 aa26.49■■□□□ 1.83
CCDC130-211ENST00000589669 MAPK8IP2Q13387 824 aaPredicted RBP26.42■■□□□ 1.82
CCDC130-211ENST00000589669 UNC13AQ9UPW8 1703 aa26.42■■□□□ 1.82
CCDC130-211ENST00000589669 BICRAQ9NZM4 1560 aa26.38■■□□□ 1.81
CCDC130-211ENST00000589669 CNKSR2Q8WXI2 1034 aa26.32■■□□□ 1.8
CCDC130-211ENST00000589669 NPM3O75607 178 aaKnown RBP26.18■■□□□ 1.78
CCDC130-211ENST00000589669 SCRIBQ14160 1630 aa26.13■■□□□ 1.77
CCDC130-211ENST00000589669 SHROOM4Q9ULL8 1493 aa26.11■■□□□ 1.77
CCDC130-211ENST00000589669 DMRT2Q9Y5R5 561 aa25.97■■□□□ 1.75
CCDC130-211ENST00000589669 RNF216Q9NWF9 866 aaPredicted RBP25.73■■□□□ 1.71
CCDC130-211ENST00000589669 EIF4G1Q04637 1599 aaKnown RBP25.7■■□□□ 1.71
CCDC130-211ENST00000589669 SLC4A1APQ9BWU0 796 aaKnown RBP25.67■■□□□ 1.7
CCDC130-211ENST00000589669 CC2D2AQ9P2K1 1620 aa25.65■■□□□ 1.7
CCDC130-211ENST00000589669 CECR2Q9BXF3 1484 aa25.6■■□□□ 1.69
CCDC130-211ENST00000589669 HOXD11P31277 338 aaPredicted RBP25.56■■□□□ 1.68
CCDC130-211ENST00000589669 EHMT2Q96KQ7 1210 aa25.33■■□□□ 1.65
CCDC130-211ENST00000589669 NCAPD3P42695 1498 aa25.11■■□□□ 1.61
CCDC130-211ENST00000589669 ATAD2BQ9ULI0 1458 aa25.04■■□□□ 1.6
CCDC130-211ENST00000589669 SMARCA4P51532 1647 aa25■■□□□ 1.59
CCDC130-211ENST00000589669 BAZ1AQ9NRL2 1556 aaPredicted RBP24.97■■□□□ 1.59
CCDC130-211ENST00000589669 SMARCA2P51531 1590 aa24.95■■□□□ 1.58
CCDC130-211ENST00000589669 CSRNP3Q8WYN3 585 aa24.89■■□□□ 1.58
CCDC130-211ENST00000589669 HMGXB3Q12766 1538 aa24.85■■□□□ 1.57
CCDC130-211ENST00000589669 MROH2BQ7Z745 1585 aa24.83■■□□□ 1.57
CCDC130-211ENST00000589669 PEG3Q9GZU2 1588 aa24.81■■□□□ 1.56
CCDC130-211ENST00000589669 DCAF8L1A6NGE4 600 aa24.81■■□□□ 1.56
CCDC130-211ENST00000589669 ZBTB22O15209 634 aa24.81■■□□□ 1.56
CCDC130-211ENST00000589669 BAZ1BQ9UIG0 1483 aaKnown RBP24.77■■□□□ 1.56
CCDC130-211ENST00000589669 FOXD4L1Q9NU39 408 aa24.67■■□□□ 1.54
CCDC130-211ENST00000589669 SLC4A2P04920 1241 aa24.65■■□□□ 1.54
CCDC130-211ENST00000589669 POTEDQ86YR6 584 aa24.62■■□□□ 1.53
CCDC130-211ENST00000589669 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
CCDC130-211ENST00000589669 RSF1Q96T23 1441 aaPredicted RBP24.51■■□□□ 1.51
CCDC130-211ENST00000589669 NESP48681 1621 aa24.5■■□□□ 1.51
CCDC130-211ENST00000589669 WIZO95785 1651 aa24.48■■□□□ 1.51
CCDC130-211ENST00000589669 LAMC3Q9Y6N6 1575 aa24.39■■□□□ 1.5
CCDC130-211ENST00000589669 CUX2O14529 1486 aa24.38■■□□□ 1.49
CCDC130-211ENST00000589669 CADPSQ9ULU8 1353 aa24.38■■□□□ 1.49
CCDC130-211ENST00000589669 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.34■■□□□ 1.496e-7■■□□□ 14
CCDC130-211ENST00000589669 PDS5BQ9NTI5 1447 aa24.33■■□□□ 1.49
CCDC130-211ENST00000589669 TOP2AP11388 1531 aaKnown RBP24.23■■□□□ 1.47
CCDC130-211ENST00000589669 MYCNP04198 464 aaPredicted RBP24.16■■□□□ 1.46
CCDC130-211ENST00000589669 CFTRP13569 1480 aa24.13■■□□□ 1.45
CCDC130-211ENST00000589669 DNAJC5Q9H3Z4 198 aa24.11■■□□□ 1.45
CCDC130-211ENST00000589669 THOC2Q8NI27 1593 aaKnown RBP24.11■■□□□ 1.45
CCDC130-211ENST00000589669 KIF21AQ7Z4S6 1674 aa24.08■■□□□ 1.44
CCDC130-211ENST00000589669 CCDC88BA6NC98 1476 aa24.03■■□□□ 1.44
CCDC130-211ENST00000589669 FANCD2Q9BXW9 1451 aa24.02■■□□□ 1.44
CCDC130-211ENST00000589669 MRC2Q9UBG0 1479 aa24.02■■□□□ 1.44
CCDC130-211ENST00000589669 U3KPZ7 1027 aaPredicted RBP24.02■■□□□ 1.44
CCDC130-211ENST00000589669 CEP164Q9UPV0 1460 aa23.99■■□□□ 1.43
CCDC130-211ENST00000589669 WDR62O43379 1518 aa23.93■■□□□ 1.42
CCDC130-211ENST00000589669 URB2Q14146 1524 aaKnown RBP23.78■■□□□ 1.4
CCDC130-211ENST00000589669 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.75■■□□□ 1.39
CCDC130-211ENST00000589669 ATXN8OSP0DMR3 200 aa23.75■■□□□ 1.39
CCDC130-211ENST00000589669 HNRNPUL2Q1KMD3 747 aaKnown RBP23.75■■□□□ 1.39
CCDC130-211ENST00000589669 RNF39Q9H2S5 420 aa23.71■■□□□ 1.39
CCDC130-211ENST00000589669 SAMD1Q6SPF0 538 aaPredicted RBP23.7■■□□□ 1.38
CCDC130-211ENST00000589669 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
CCDC130-211ENST00000589669 PRDM2Q13029 1718 aa23.67■■□□□ 1.38
CCDC130-211ENST00000589669 ABCC8Q09428 1581 aa23.63■■□□□ 1.37
CCDC130-211ENST00000589669 TOPBP1Q92547 1522 aa23.59■■□□□ 1.37
CCDC130-211ENST00000589669 ATF5Q9Y2D1 282 aaPredicted RBP23.54■■□□□ 1.36
CCDC130-211ENST00000589669 IFT140Q96RY7 1462 aa23.54■■□□□ 1.36
CCDC130-211ENST00000589669 DNMBPQ6XZF7 1577 aa23.5■■□□□ 1.35
CCDC130-211ENST00000589669 OSCARQ8IYS5 282 aa23.45■■□□□ 1.34
CCDC130-211ENST00000589669 ZNF608Q9ULD9 1512 aaPredicted RBP23.43■■□□□ 1.34
CCDC130-211ENST00000589669 APLP2Q06481 763 aa23.42■■□□□ 1.34
CCDC130-211ENST00000589669 C1QBPQ07021 282 aaKnown RBP23.41■■□□□ 1.34
CCDC130-211ENST00000589669 POLA1P09884 1462 aaPredicted RBP23.37■■□□□ 1.33
CCDC130-211ENST00000589669 SOGA1O94964 1423 aa23.34■■□□□ 1.33
CCDC130-211ENST00000589669 TARBP1Q13395 1621 aaKnown RBP23.32■■□□□ 1.32
CCDC130-211ENST00000589669 AQRO60306 1485 aaKnown RBP eCLIP23.31■■□□□ 1.322e-10■■■□□ 17.3
CCDC130-211ENST00000589669 CUX1P39880 1505 aa23.29■■□□□ 1.32
CCDC130-211ENST00000589669 RAD54L2Q9Y4B4 1467 aa23.29■■□□□ 1.32
CCDC130-211ENST00000589669 SPINK5Q9NQ38 1064 aaPredicted RBP23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms