RNA–Protein interactions for RNA: ENST00000587700.1

RFX2-209, Transcript of regulatory factor X2, humanhuman

TSL 2

Gene RFX2, Length 2,376 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX2-209ENST00000587700 CHIC1Q5VXU3 224 aa19.65■□□□□ 0.74
RFX2-209ENST00000587700 AEBP2Q6ZN18 517 aaPredicted RBP19.37■□□□□ 0.69
RFX2-209ENST00000587700 NISCHQ9Y2I1 1504 aa19.06■□□□□ 0.64
RFX2-209ENST00000587700 PHF23Q9BUL5 403 aaPredicted RBP17.36■□□□□ 0.37
RFX2-209ENST00000587700 SLC24A1O60721 1099 aa16.88■□□□□ 0.29
RFX2-209ENST00000587700 SENP3Q9H4L4 574 aaPredicted RBP16.33■□□□□ 0.2
RFX2-209ENST00000587700 PLPPR3Q6T4P5 718 aa16.28■□□□□ 0.2
RFX2-209ENST00000587700 SHROOM4Q9ULL8 1493 aa16.27■□□□□ 0.2
RFX2-209ENST00000587700 EHMT2Q96KQ7 1210 aa16.26■□□□□ 0.19
RFX2-209ENST00000587700 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
RFX2-209ENST00000587700 ZCCHC6Q5VYS8 1495 aaKnown RBP16.07■□□□□ 0.16
RFX2-209ENST00000587700 DCAF8L2P0C7V8 631 aa16.02■□□□□ 0.16
RFX2-209ENST00000587700 ABCC9O60706 1549 aa15.92■□□□□ 0.14
RFX2-209ENST00000587700 SUPT5HO00267 1087 aaKnown RBP15.86■□□□□ 0.13
RFX2-209ENST00000587700 DNAJC5BQ9UF47 199 aa15.78■□□□□ 0.12
RFX2-209ENST00000587700 DCAF1Q9Y4B6 1507 aa15.55■□□□□ 0.08
RFX2-209ENST00000587700 DNAJC5Q9H3Z4 198 aa15.54■□□□□ 0.08
RFX2-209ENST00000587700 RTN4Q9NQC3 1192 aaKnown RBP15.51■□□□□ 0.07
RFX2-209ENST00000587700 MYO15BQ96JP2 1530 aa15.32■□□□□ 0.04
RFX2-209ENST00000587700 HRCP23327 699 aa15.28■□□□□ 0.04
RFX2-209ENST00000587700 SCRIBQ14160 1630 aa15.28■□□□□ 0.04
RFX2-209ENST00000587700 CSRNP3Q8WYN3 585 aa15.24■□□□□ 0.03
RFX2-209ENST00000587700 ADRA2BP18089 450 aa15.19■□□□□ 0.02
RFX2-209ENST00000587700 KCNA4P22459 653 aa15.18■□□□□ 0.02
RFX2-209ENST00000587700 AMER1Q5JTC6 1135 aaPredicted RBP15.12■□□□□ 0.01
RFX2-209ENST00000587700 NCBP3Q53F19 620 aaKnown RBP15.09■□□□□ 0.01
RFX2-209ENST00000587700 RSF1Q96T23 1441 aaPredicted RBP15.05■□□□□ 0
RFX2-209ENST00000587700 NACADO15069 1562 aa15.05■□□□□ -0
RFX2-209ENST00000587700 FOXD1Q16676 465 aa15.05■□□□□ -0
RFX2-209ENST00000587700 PPP6R1Q9UPN7 881 aa15.04■□□□□ -0
RFX2-209ENST00000587700 RB1CC1Q8TDY2 1594 aa15.03■□□□□ -0
RFX2-209ENST00000587700 PCGF6Q9BYE7 350 aa15.02□□□□□ -0.01
RFX2-209ENST00000587700 DAXXQ9UER7 740 aaPredicted RBP14.99□□□□□ -0.01
RFX2-209ENST00000587700 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.02
RFX2-209ENST00000587700 LOC105371045A0A1W2PR82 267 aa14.88□□□□□ -0.03
RFX2-209ENST00000587700 MROH2BQ7Z745 1585 aa14.85□□□□□ -0.03
RFX2-209ENST00000587700 TRIM26Q12899 539 aaPredicted RBP14.8□□□□□ -0.04
RFX2-209ENST00000587700 PPARGC1BQ86YN6 1023 aaKnown RBP14.77□□□□□ -0.04
RFX2-209ENST00000587700 WIZO95785 1651 aa14.75□□□□□ -0.05
RFX2-209ENST00000587700 PRKCSHP14314 528 aaPredicted RBP14.75□□□□□ -0.05
RFX2-209ENST00000587700 TRIM41Q8WV44 630 aa14.73□□□□□ -0.05
RFX2-209ENST00000587700 PABPN1Q86U42 306 aaKnown RBP eCLIP14.69□□□□□ -0.06
RFX2-209ENST00000587700 FAM9AQ8IZU1 332 aaPredicted RBP14.69□□□□□ -0.06
RFX2-209ENST00000587700 ZEB1P37275 1124 aaPredicted RBP14.66□□□□□ -0.06
RFX2-209ENST00000587700 UNC13AQ9UPW8 1703 aa14.64□□□□□ -0.07
RFX2-209ENST00000587700 BAZ1AQ9NRL2 1556 aaPredicted RBP14.63□□□□□ -0.07
RFX2-209ENST00000587700 CUX2O14529 1486 aa14.57□□□□□ -0.08
RFX2-209ENST00000587700 SMARCA4P51532 1647 aa14.54□□□□□ -0.08
RFX2-209ENST00000587700 BICRAQ9NZM4 1560 aa14.53□□□□□ -0.08
RFX2-209ENST00000587700 SLC4A1APQ9BWU0 796 aaKnown RBP14.52□□□□□ -0.09
RFX2-209ENST00000587700 CC2D2AQ9P2K1 1620 aa14.5□□□□□ -0.09
RFX2-209ENST00000587700 TOP2AP11388 1531 aaKnown RBP14.46□□□□□ -0.09
RFX2-209ENST00000587700 CCDC88BA6NC98 1476 aa14.46□□□□□ -0.1
RFX2-209ENST00000587700 PPP4R3CPQ6ZMV5 832 aa14.42□□□□□ -0.1
RFX2-209ENST00000587700 EIF4G1Q04637 1599 aaKnown RBP14.42□□□□□ -0.1
RFX2-209ENST00000587700 SMARCA2P51531 1590 aa14.4□□□□□ -0.1
RFX2-209ENST00000587700 ABCC8Q09428 1581 aa14.39□□□□□ -0.11
RFX2-209ENST00000587700 PIAS4Q8N2W9 510 aaPredicted RBP14.36□□□□□ -0.11
RFX2-209ENST00000587700 TIMELESSQ9UNS1 1208 aa14.32□□□□□ -0.12
RFX2-209ENST00000587700 ARXQ96QS3 562 aa14.3□□□□□ -0.12
RFX2-209ENST00000587700 PELP1Q8IZL8 1130 aaKnown RBP14.3□□□□□ -0.12
RFX2-209ENST00000587700 TAOK2Q9UL54 1235 aa14.27□□□□□ -0.13
RFX2-209ENST00000587700 ATAD2BQ9ULI0 1458 aa14.24□□□□□ -0.13
RFX2-209ENST00000587700 SOGA1O94964 1423 aa14.24□□□□□ -0.13
RFX2-209ENST00000587700 PEG3Q9GZU2 1588 aa14.23□□□□□ -0.13
RFX2-209ENST00000587700 BAZ1BQ9UIG0 1483 aaKnown RBP14.19□□□□□ -0.14
RFX2-209ENST00000587700 RUSC2Q8N2Y8 1516 aa14.19□□□□□ -0.14
RFX2-209ENST00000587700 WRNQ14191 1432 aaPredicted RBP eCLIP14.17□□□□□ -0.14
RFX2-209ENST00000587700 SCAF1Q9H7N4 1312 aaKnown RBP14.15□□□□□ -0.14
RFX2-209ENST00000587700 TULP1O00294 542 aaPredicted RBP14.11□□□□□ -0.15
RFX2-209ENST00000587700 TTBK1Q5TCY1 1321 aaPredicted RBP14.1□□□□□ -0.15
RFX2-209ENST00000587700 CCER1Q8TC90 406 aaPredicted RBP14.08□□□□□ -0.16
RFX2-209ENST00000587700 BCANQ96GW7 911 aa14.08□□□□□ -0.16
RFX2-209ENST00000587700 EEA1Q15075 1411 aa14.08□□□□□ -0.16
RFX2-209ENST00000587700 SYNJ1O43426 1573 aa14.08□□□□□ -0.16
RFX2-209ENST00000587700 UBTFP17480 764 aaKnown RBP14.07□□□□□ -0.16
RFX2-209ENST00000587700 NPM3O75607 178 aaKnown RBP14.06□□□□□ -0.16
RFX2-209ENST00000587700 TNIKQ9UKE5 1360 aa14.06□□□□□ -0.16
RFX2-209ENST00000587700 ZBTB22O15209 634 aa14.05□□□□□ -0.16
RFX2-209ENST00000587700 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.05□□□□□ -0.16
RFX2-209ENST00000587700 CEP162Q5TB80 1403 aa14.04□□□□□ -0.16
RFX2-209ENST00000587700 TPRNQ4KMQ1 711 aa14.03□□□□□ -0.16
RFX2-209ENST00000587700 ACIN1Q9UKV3 1341 aaKnown RBP14□□□□□ -0.17
RFX2-209ENST00000587700 PLCB2Q00722 1185 aa13.97□□□□□ -0.17
RFX2-209ENST00000587700 NCAPD3P42695 1498 aa13.97□□□□□ -0.17
RFX2-209ENST00000587700 RANGAP1P46060 587 aaPredicted RBP13.95□□□□□ -0.18
RFX2-209ENST00000587700 DIEXFQ68CQ4 756 aaKnown RBP13.94□□□□□ -0.18
RFX2-209ENST00000587700 GOLGA3Q08378 1498 aa13.94□□□□□ -0.18
RFX2-209ENST00000587700 CENPBP07199 599 aaPredicted RBP13.93□□□□□ -0.18
RFX2-209ENST00000587700 ERCC6Q03468 1493 aa13.92□□□□□ -0.18
RFX2-209ENST00000587700 HMGXB3Q12766 1538 aa13.91□□□□□ -0.18
RFX2-209ENST00000587700 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
RFX2-209ENST00000587700 RAPGEF2Q9Y4G8 1499 aa13.88□□□□□ -0.19
RFX2-209ENST00000587700 CEP164Q9UPV0 1460 aa13.87□□□□□ -0.19
RFX2-209ENST00000587700 CNKSR2Q8WXI2 1034 aa13.87□□□□□ -0.19
RFX2-209ENST00000587700 TOP2BQ02880 1626 aa13.87□□□□□ -0.19
RFX2-209ENST00000587700 HOMEZQ8IX15 550 aa13.86□□□□□ -0.19
RFX2-209ENST00000587700 APLP2Q06481 763 aa13.85□□□□□ -0.19
RFX2-209ENST00000587700 KIF21BO75037 1637 aa13.84□□□□□ -0.19
RFX2-209ENST00000587700 CUX1P39880 1505 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms