RNA–Protein interactions for RNA: ENST00000587046.1

RDH13-207, Transcript of retinol dehydrogenase 13, humanhuman

TSL 4

Gene RDH13, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13-207ENST00000587046 AEBP2Q6ZN18 517 aaPredicted RBP13.94□□□□□ -0.18
RDH13-207ENST00000587046 CHIC1Q5VXU3 224 aa13.27□□□□□ -0.29
RDH13-207ENST00000587046 SENP3Q9H4L4 574 aaPredicted RBP11.97□□□□□ -0.49
RDH13-207ENST00000587046 PHF23Q9BUL5 403 aaPredicted RBP11.78□□□□□ -0.52
RDH13-207ENST00000587046 FOXD1Q16676 465 aa11.11□□□□□ -0.63
RDH13-207ENST00000587046 PLPPR3Q6T4P5 718 aa10.62□□□□□ -0.71
RDH13-207ENST00000587046 MSH5O43196 834 aa10.46□□□□□ -0.73
RDH13-207ENST00000587046 PIAS4Q8N2W9 510 aaPredicted RBP10.4□□□□□ -0.74
RDH13-207ENST00000587046 PPP6R1Q9UPN7 881 aa10.35□□□□□ -0.75
RDH13-207ENST00000587046 ADRA2BP18089 450 aa10.32□□□□□ -0.76
RDH13-207ENST00000587046 POTEDQ86YR6 584 aa10.2□□□□□ -0.78
RDH13-207ENST00000587046 NISCHQ9Y2I1 1504 aa10.19□□□□□ -0.78
RDH13-207ENST00000587046 SCAF1Q9H7N4 1312 aaKnown RBP9.54□□□□□ -0.88
RDH13-207ENST00000587046 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
RDH13-207ENST00000587046 MAPK8IP2Q13387 824 aaPredicted RBP9.47□□□□□ -0.89
RDH13-207ENST00000587046 PPP4R3CPQ6ZMV5 832 aa9.28□□□□□ -0.92
RDH13-207ENST00000587046 ABCC9O60706 1549 aa9.24□□□□□ -0.93
RDH13-207ENST00000587046 CNKSR2Q8WXI2 1034 aa9.14□□□□□ -0.95
RDH13-207ENST00000587046 HOXD11P31277 338 aaPredicted RBP9.12□□□□□ -0.95
RDH13-207ENST00000587046 DNAJC5BQ9UF47 199 aa9.11□□□□□ -0.95
RDH13-207ENST00000587046 DCAF8L1A6NGE4 600 aa9.06□□□□□ -0.96
RDH13-207ENST00000587046 RNF216Q9NWF9 866 aaPredicted RBP9.05□□□□□ -0.96
RDH13-207ENST00000587046 HRCP23327 699 aa8.97□□□□□ -0.97
RDH13-207ENST00000587046 CACNB1Q02641 598 aaPredicted RBP8.96□□□□□ -0.98
RDH13-207ENST00000587046 NCBP3Q53F19 620 aaKnown RBP8.96□□□□□ -0.98
RDH13-207ENST00000587046 KCNA4P22459 653 aa8.94□□□□□ -0.98
RDH13-207ENST00000587046 RNF39Q9H2S5 420 aa8.9□□□□□ -0.98
RDH13-207ENST00000587046 PELP1Q8IZL8 1130 aaKnown RBP8.82□□□□□ -1
RDH13-207ENST00000587046 C1QBPQ07021 282 aaKnown RBP8.8□□□□□ -1
RDH13-207ENST00000587046 NPM3O75607 178 aaKnown RBP8.77□□□□□ -1.01
RDH13-207ENST00000587046 DCAF1Q9Y4B6 1507 aa8.73□□□□□ -1.01
RDH13-207ENST00000587046 EHMT2Q96KQ7 1210 aa8.72□□□□□ -1.01
RDH13-207ENST00000587046 SHROOM4Q9ULL8 1493 aa8.7□□□□□ -1.02
RDH13-207ENST00000587046 SUPT5HO00267 1087 aaKnown RBP8.7□□□□□ -1.02
RDH13-207ENST00000587046 ZCCHC6Q5VYS8 1495 aaKnown RBP8.7□□□□□ -1.02
RDH13-207ENST00000587046 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.69□□□□□ -1.02
RDH13-207ENST00000587046 MYO15BQ96JP2 1530 aa8.68□□□□□ -1.02
RDH13-207ENST00000587046 PABPN1Q86U42 306 aaKnown RBP eCLIP8.67□□□□□ -1.02
RDH13-207ENST00000587046 PCGF6Q9BYE7 350 aa8.64□□□□□ -1.03
RDH13-207ENST00000587046 CCDC180Q9P1Z9 1646 aa8.6□□□□□ -1.03
RDH13-207ENST00000587046 ZEB1P37275 1124 aaPredicted RBP8.59□□□□□ -1.03
RDH13-207ENST00000587046 DCAF8L2P0C7V8 631 aa8.55□□□□□ -1.04
RDH13-207ENST00000587046 MYT1Q01538 1121 aa8.55□□□□□ -1.04
RDH13-207ENST00000587046 PPARGC1BQ86YN6 1023 aaKnown RBP8.55□□□□□ -1.04
RDH13-207ENST00000587046 SLC4A1APQ9BWU0 796 aaKnown RBP8.55□□□□□ -1.04
RDH13-207ENST00000587046 TRIM26Q12899 539 aaPredicted RBP8.54□□□□□ -1.04
RDH13-207ENST00000587046 DNAJC5Q9H3Z4 198 aa8.52□□□□□ -1.05
RDH13-207ENST00000587046 CSRNP3Q8WYN3 585 aa8.48□□□□□ -1.05
RDH13-207ENST00000587046 U3KPZ7 1027 aaPredicted RBP8.48□□□□□ -1.05
RDH13-207ENST00000587046 RB1CC1Q8TDY2 1594 aa8.46□□□□□ -1.06
RDH13-207ENST00000587046 SLC4A2P04920 1241 aa8.37□□□□□ -1.07
RDH13-207ENST00000587046 CAPN15O75808 1086 aa8.36□□□□□ -1.07
RDH13-207ENST00000587046 LOC105371045A0A1W2PR82 267 aa8.34□□□□□ -1.07
RDH13-207ENST00000587046 SPINK5Q9NQ38 1064 aaPredicted RBP8.34□□□□□ -1.07
RDH13-207ENST00000587046 APLP2Q06481 763 aa8.33□□□□□ -1.08
RDH13-207ENST00000587046 NACADO15069 1562 aa8.32□□□□□ -1.08
RDH13-207ENST00000587046 DSG3P32926 999 aa8.32□□□□□ -1.08
RDH13-207ENST00000587046 CECR2Q9BXF3 1484 aa8.32□□□□□ -1.08
RDH13-207ENST00000587046 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.31□□□□□ -1.08
RDH13-207ENST00000587046 HNRNPUL2Q1KMD3 747 aaKnown RBP8.31□□□□□ -1.08
RDH13-207ENST00000587046 SLC24A1O60721 1099 aa8.29□□□□□ -1.08
RDH13-207ENST00000587046 BICRAQ9NZM4 1560 aa8.29□□□□□ -1.08
RDH13-207ENST00000587046 ACIN1Q9UKV3 1341 aaKnown RBP8.27□□□□□ -1.09
RDH13-207ENST00000587046 ZBTB22O15209 634 aa8.26□□□□□ -1.09
RDH13-207ENST00000587046 SAMD1Q6SPF0 538 aaPredicted RBP8.24□□□□□ -1.09
RDH13-207ENST00000587046 ZNF219Q9P2Y4 722 aaPredicted RBP8.24□□□□□ -1.09
RDH13-207ENST00000587046 CENPBP07199 599 aaPredicted RBP8.23□□□□□ -1.09
RDH13-207ENST00000587046 CC2D2AQ9P2K1 1620 aa8.21□□□□□ -1.09
RDH13-207ENST00000587046 TRHP20396 242 aaPredicted RBP8.21□□□□□ -1.1
RDH13-207ENST00000587046 UNC13AQ9UPW8 1703 aa8.17□□□□□ -1.1
RDH13-207ENST00000587046 TRIM41Q8WV44 630 aa8.16□□□□□ -1.1
RDH13-207ENST00000587046 RSF1Q96T23 1441 aaPredicted RBP8.15□□□□□ -1.1
RDH13-207ENST00000587046 MYCNP04198 464 aaPredicted RBP8.15□□□□□ -1.1
RDH13-207ENST00000587046 NEUROD1Q13562 356 aa8.15□□□□□ -1.1
RDH13-207ENST00000587046 ABCB7O75027 752 aa8.14□□□□□ -1.11
RDH13-207ENST00000587046 GTF3C3Q9Y5Q9 886 aa8.11□□□□□ -1.11
RDH13-207ENST00000587046 EIF4G1Q04637 1599 aaKnown RBP8.1□□□□□ -1.11
RDH13-207ENST00000587046 DIEXFQ68CQ4 756 aaKnown RBP8.1□□□□□ -1.11
RDH13-207ENST00000587046 FOXD4L1Q9NU39 408 aa8.1□□□□□ -1.11
RDH13-207ENST00000587046 WRNQ14191 1432 aaPredicted RBP eCLIP8.07□□□□□ -1.12
RDH13-207ENST00000587046 CCER1Q8TC90 406 aaPredicted RBP8.07□□□□□ -1.12
RDH13-207ENST00000587046 TTBK1Q5TCY1 1321 aaPredicted RBP8.04□□□□□ -1.12
RDH13-207ENST00000587046 CLSPNQ9HAW4 1339 aa8.04□□□□□ -1.12
RDH13-207ENST00000587046 SCRIBQ14160 1630 aa8.02□□□□□ -1.13
RDH13-207ENST00000587046 ZNF316A6NFI3 1004 aaPredicted RBP8.01□□□□□ -1.13
RDH13-207ENST00000587046 POTEHQ6S545 545 aa8.01□□□□□ -1.13
RDH13-207ENST00000587046 POLA2Q14181 598 aa7.99□□□□□ -1.13
RDH13-207ENST00000587046 RBM42Q9BTD8 480 aaKnown RBP7.99□□□□□ -1.13
RDH13-207ENST00000587046 FAM9AQ8IZU1 332 aaPredicted RBP7.98□□□□□ -1.13
RDH13-207ENST00000587046 CUX2O14529 1486 aa7.97□□□□□ -1.13
RDH13-207ENST00000587046 EEA1Q15075 1411 aa7.95□□□□□ -1.14
RDH13-207ENST00000587046 ERCC6Q03468 1493 aa7.94□□□□□ -1.14
RDH13-207ENST00000587046 TNIKQ9UKE5 1360 aa7.93□□□□□ -1.14
RDH13-207ENST00000587046 BAZ1AQ9NRL2 1556 aaPredicted RBP7.9□□□□□ -1.14
RDH13-207ENST00000587046 CEP162Q5TB80 1403 aa7.9□□□□□ -1.14
RDH13-207ENST00000587046 ZBTB12Q9Y330 459 aaPredicted RBP7.9□□□□□ -1.14
RDH13-207ENST00000587046 ATF5Q9Y2D1 282 aaPredicted RBP7.89□□□□□ -1.15
RDH13-207ENST00000587046 MROH2BQ7Z745 1585 aa7.88□□□□□ -1.15
RDH13-207ENST00000587046 MIER1Q8N108 512 aa7.85□□□□□ -1.15
RDH13-207ENST00000587046 ATXN8OSP0DMR3 200 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms