RNA–Protein interactions for RNA: ENST00000582655.5

PHF12-210, Transcript of PHD finger protein 12, humanhuman

TSL 5

Gene PHF12, Length 2,551 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF12-210ENST00000582655 NISCHQ9Y2I1 1504 aa20.07■□□□□ 0.8
PHF12-210ENST00000582655 SHROOM4Q9ULL8 1493 aa17.92■□□□□ 0.46
PHF12-210ENST00000582655 SUPT5HO00267 1087 aaKnown RBP17.78■□□□□ 0.44
PHF12-210ENST00000582655 HRCP23327 699 aa17.47■□□□□ 0.39
PHF12-210ENST00000582655 PCGF6Q9BYE7 350 aa17.36■□□□□ 0.37
PHF12-210ENST00000582655 MYO15BQ96JP2 1530 aa17.34■□□□□ 0.37
PHF12-210ENST00000582655 PPARGC1BQ86YN6 1023 aaKnown RBP17.32■□□□□ 0.36
PHF12-210ENST00000582655 CHIC1Q5VXU3 224 aa17.3■□□□□ 0.36
PHF12-210ENST00000582655 DCAF8L2P0C7V8 631 aa17.11■□□□□ 0.33
PHF12-210ENST00000582655 LOC105371045A0A1W2PR82 267 aa17.01■□□□□ 0.31
PHF12-210ENST00000582655 ZCCHC6Q5VYS8 1495 aaKnown RBP17.01■□□□□ 0.31
PHF12-210ENST00000582655 DCAF1Q9Y4B6 1507 aa16.75■□□□□ 0.27
PHF12-210ENST00000582655 TRIM26Q12899 539 aaPredicted RBP16.72■□□□□ 0.27
PHF12-210ENST00000582655 CCDC180Q9P1Z9 1646 aa16.68■□□□□ 0.26
PHF12-210ENST00000582655 EHMT2Q96KQ7 1210 aa16.53■□□□□ 0.24
PHF12-210ENST00000582655 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
PHF12-210ENST00000582655 SCAF1Q9H7N4 1312 aaKnown RBP16.49■□□□□ 0.23
PHF12-210ENST00000582655 ZEB1P37275 1124 aaPredicted RBP16.42■□□□□ 0.22
PHF12-210ENST00000582655 TRIM41Q8WV44 630 aa16.37■□□□□ 0.21
PHF12-210ENST00000582655 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
PHF12-210ENST00000582655 ABCC9O60706 1549 aa16.18■□□□□ 0.18
PHF12-210ENST00000582655 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.18■□□□□ 0.18
PHF12-210ENST00000582655 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
PHF12-210ENST00000582655 NEUROD1Q13562 356 aa16.13■□□□□ 0.17
PHF12-210ENST00000582655 CCER1Q8TC90 406 aaPredicted RBP16.09■□□□□ 0.17
PHF12-210ENST00000582655 ACIN1Q9UKV3 1341 aaKnown RBP16.09■□□□□ 0.17
PHF12-210ENST00000582655 RB1CC1Q8TDY2 1594 aa16.06■□□□□ 0.16
PHF12-210ENST00000582655 TTBK1Q5TCY1 1321 aaPredicted RBP16.06■□□□□ 0.16
PHF12-210ENST00000582655 SCRIBQ14160 1630 aa16.03■□□□□ 0.16
PHF12-210ENST00000582655 GTF3C3Q9Y5Q9 886 aa16.02■□□□□ 0.16
PHF12-210ENST00000582655 DIEXFQ68CQ4 756 aaKnown RBP15.98■□□□□ 0.15
PHF12-210ENST00000582655 CENPBP07199 599 aaPredicted RBP15.87■□□□□ 0.13
PHF12-210ENST00000582655 CECR2Q9BXF3 1484 aa15.83■□□□□ 0.12
PHF12-210ENST00000582655 YTHDC1Q96MU7 727 aaKnown RBP15.82■□□□□ 0.12
PHF12-210ENST00000582655 MROH2BQ7Z745 1585 aa15.74■□□□□ 0.11
PHF12-210ENST00000582655 ZNF316A6NFI3 1004 aaPredicted RBP15.68■□□□□ 0.1
PHF12-210ENST00000582655 WIZO95785 1651 aa15.68■□□□□ 0.1
PHF12-210ENST00000582655 MIER1Q8N108 512 aa15.63■□□□□ 0.09
PHF12-210ENST00000582655 NACADO15069 1562 aa15.61■□□□□ 0.09
PHF12-210ENST00000582655 UBTFP17480 764 aaKnown RBP15.6■□□□□ 0.09
PHF12-210ENST00000582655 CEP162Q5TB80 1403 aa15.59■□□□□ 0.09
PHF12-210ENST00000582655 MYT1Q01538 1121 aa15.58■□□□□ 0.09
PHF12-210ENST00000582655 HNRNPUL2Q1KMD3 747 aaKnown RBP15.58■□□□□ 0.09
PHF12-210ENST00000582655 ABCC8Q09428 1581 aa15.58■□□□□ 0.08
PHF12-210ENST00000582655 CCDC88BA6NC98 1476 aa15.58■□□□□ 0.08
PHF12-210ENST00000582655 SOGA1O94964 1423 aa15.55■□□□□ 0.08
PHF12-210ENST00000582655 WRNQ14191 1432 aaPredicted RBP eCLIP15.52■□□□□ 0.089e-6■■■■■ 50.1
PHF12-210ENST00000582655 RUSC2Q8N2Y8 1516 aa15.48■□□□□ 0.07
PHF12-210ENST00000582655 CSRNP3Q8WYN3 585 aa15.47■□□□□ 0.07
PHF12-210ENST00000582655 TNIKQ9UKE5 1360 aa15.45■□□□□ 0.06
PHF12-210ENST00000582655 EIF4G1Q04637 1599 aaKnown RBP15.45■□□□□ 0.06
PHF12-210ENST00000582655 RANGAP1P46060 587 aaPredicted RBP15.43■□□□□ 0.06
PHF12-210ENST00000582655 BAZ1AQ9NRL2 1556 aaPredicted RBP15.43■□□□□ 0.06
PHF12-210ENST00000582655 PABPN1Q86U42 306 aaKnown RBP eCLIP15.33■□□□□ 0.04
PHF12-210ENST00000582655 UNC13AQ9UPW8 1703 aa15.29■□□□□ 0.04
PHF12-210ENST00000582655 TOP2AP11388 1531 aaKnown RBP15.28■□□□□ 0.04
PHF12-210ENST00000582655 GOLGA3Q08378 1498 aa15.27■□□□□ 0.04
PHF12-210ENST00000582655 SMARCA2P51531 1590 aa15.27■□□□□ 0.03
PHF12-210ENST00000582655 APLP2Q06481 763 aa15.26■□□□□ 0.03
PHF12-210ENST00000582655 SUPT16HQ9Y5B9 1047 aaKnown RBP15.25■□□□□ 0.03
PHF12-210ENST00000582655 EEA1Q15075 1411 aa15.23■□□□□ 0.03
PHF12-210ENST00000582655 CLIP1P30622 1438 aa15.21■□□□□ 0.03
PHF12-210ENST00000582655 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
PHF12-210ENST00000582655 KCNH8Q96L42 1107 aa15.13■□□□□ 0.01
PHF12-210ENST00000582655 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
PHF12-210ENST00000582655 VPS8Q8N3P4 1428 aa15.13■□□□□ 0.01
PHF12-210ENST00000582655 BICRAQ9NZM4 1560 aa15.13■□□□□ 0.01
PHF12-210ENST00000582655 CEP164Q9UPV0 1460 aa15.12■□□□□ 0.01
PHF12-210ENST00000582655 BCANQ96GW7 911 aa15.11■□□□□ 0.01
PHF12-210ENST00000582655 DHX57Q6P158 1386 aaKnown RBP15.09■□□□□ 0.01
PHF12-210ENST00000582655 RAPGEF2Q9Y4G8 1499 aa15.09■□□□□ 0.01
PHF12-210ENST00000582655 ITGAEP38570 1179 aa15.07■□□□□ 0
PHF12-210ENST00000582655 KANK4Q5T7N3 995 aaPredicted RBP15.07■□□□□ 0
PHF12-210ENST00000582655 SYNJ1O43426 1573 aa15.05■□□□□ 0
PHF12-210ENST00000582655 KIF21BO75037 1637 aa15.02□□□□□ -0.01
PHF12-210ENST00000582655 ANP32EQ9BTT0 268 aa15.01□□□□□ -0.01
PHF12-210ENST00000582655 CLSPNQ9HAW4 1339 aa14.99□□□□□ -0.01
PHF12-210ENST00000582655 FKBP8Q14318 412 aa14.95□□□□□ -0.02
PHF12-210ENST00000582655 DDX10Q13206 875 aaKnown RBP14.92□□□□□ -0.02
PHF12-210ENST00000582655 BAZ1BQ9UIG0 1483 aaKnown RBP14.92□□□□□ -0.02
PHF12-210ENST00000582655 HIRIP3Q9BW71 556 aaPredicted RBP14.9□□□□□ -0.02
PHF12-210ENST00000582655 ARAP1Q96P48 1450 aa14.86□□□□□ -0.03
PHF12-210ENST00000582655 BCL11AQ9H165 835 aa14.86□□□□□ -0.03
PHF12-210ENST00000582655 TRIM52Q96A61 297 aa14.85□□□□□ -0.03
PHF12-210ENST00000582655 SIN3AQ96ST3 1273 aa14.85□□□□□ -0.03
PHF12-210ENST00000582655 CCNB3Q8WWL7 1395 aa14.82□□□□□ -0.04
PHF12-210ENST00000582655 RBM19Q9Y4C8 960 aaKnown RBP14.81□□□□□ -0.04
PHF12-210ENST00000582655 RAB3GAP2Q9H2M9 1393 aa14.8□□□□□ -0.04
PHF12-210ENST00000582655 RRBP1Q9P2E9 1410 aaKnown RBP14.8□□□□□ -0.04
PHF12-210ENST00000582655 NEFLP07196 543 aa14.76□□□□□ -0.05
PHF12-210ENST00000582655 PRXQ9BXM0 1461 aa14.75□□□□□ -0.05
PHF12-210ENST00000582655 ATAD2BQ9ULI0 1458 aa14.75□□□□□ -0.05
PHF12-210ENST00000582655 FAM50AQ14320 339 aaKnown RBP14.74□□□□□ -0.05
PHF12-210ENST00000582655 MAPKBP1O60336 1514 aa14.73□□□□□ -0.05
PHF12-210ENST00000582655 WDR97A6NE52 1622 aa14.72□□□□□ -0.05
PHF12-210ENST00000582655 PPP1R15AO75807 674 aaPredicted RBP14.72□□□□□ -0.05
PHF12-210ENST00000582655 TOP2BQ02880 1626 aa14.71□□□□□ -0.05
PHF12-210ENST00000582655 PEG3Q9GZU2 1588 aa14.71□□□□□ -0.06
PHF12-210ENST00000582655 ATP1B4Q9UN42 357 aaPredicted RBP14.7□□□□□ -0.06
PHF12-210ENST00000582655 CUX2O14529 1486 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms