RNA–Protein interactions for RNA: ENST00000580086.1

MSL1-207, Transcript of male specific lethal 1 homolog, humanhuman

TSL 2

Gene MSL1, Length 2,638 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL1-207ENST00000580086 PELP1Q8IZL8 1130 aaKnown RBP13.7□□□□□ -0.22
MSL1-207ENST00000580086 NISCHQ9Y2I1 1504 aa13.58□□□□□ -0.24
MSL1-207ENST00000580086 MYT1Q01538 1121 aa13.38□□□□□ -0.27
MSL1-207ENST00000580086 HRCP23327 699 aa13.37□□□□□ -0.27
MSL1-207ENST00000580086 CHIC1Q5VXU3 224 aa13.26□□□□□ -0.29
MSL1-207ENST00000580086 AEBP2Q6ZN18 517 aaPredicted RBP13.12□□□□□ -0.31
MSL1-207ENST00000580086 PPARGC1BQ86YN6 1023 aaKnown RBP12.89□□□□□ -0.35
MSL1-207ENST00000580086 SCAF1Q9H7N4 1312 aaKnown RBP12.82□□□□□ -0.36
MSL1-207ENST00000580086 PCGF6Q9BYE7 350 aa12.75□□□□□ -0.37
MSL1-207ENST00000580086 TTBK1Q5TCY1 1321 aaPredicted RBP12.73□□□□□ -0.37
MSL1-207ENST00000580086 MYO15BQ96JP2 1530 aa12.61□□□□□ -0.39
MSL1-207ENST00000580086 DCAF1Q9Y4B6 1507 aa12.54□□□□□ -0.4
MSL1-207ENST00000580086 ZEB1P37275 1124 aaPredicted RBP12.51□□□□□ -0.41
MSL1-207ENST00000580086 CCDC180Q9P1Z9 1646 aa12.5□□□□□ -0.41
MSL1-207ENST00000580086 ACIN1Q9UKV3 1341 aaKnown RBP12.44□□□□□ -0.42
MSL1-207ENST00000580086 TRIM26Q12899 539 aaPredicted RBP12.37□□□□□ -0.43
MSL1-207ENST00000580086 NEUROD1Q13562 356 aa12.3□□□□□ -0.44
MSL1-207ENST00000580086 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
MSL1-207ENST00000580086 CENPBP07199 599 aaPredicted RBP12.25□□□□□ -0.45
MSL1-207ENST00000580086 SUPT5HO00267 1087 aaKnown RBP12.24□□□□□ -0.45
MSL1-207ENST00000580086 PHF23Q9BUL5 403 aaPredicted RBP12.23□□□□□ -0.45
MSL1-207ENST00000580086 BCL11AQ9H165 835 aa12.22□□□□□ -0.45
MSL1-207ENST00000580086 EHMT2Q96KQ7 1210 aa12.17□□□□□ -0.46
MSL1-207ENST00000580086 SHROOM4Q9ULL8 1493 aa12.1□□□□□ -0.47
MSL1-207ENST00000580086 FAM9AQ8IZU1 332 aaPredicted RBP12.08□□□□□ -0.48
MSL1-207ENST00000580086 PRKCSHP14314 528 aaPredicted RBP12.07□□□□□ -0.48
MSL1-207ENST00000580086 ANP32EQ9BTT0 268 aa12□□□□□ -0.49
MSL1-207ENST00000580086 LOC105371045A0A1W2PR82 267 aa11.96□□□□□ -0.49
MSL1-207ENST00000580086 ERICH6Q7L0X2 663 aa11.95□□□□□ -0.5
MSL1-207ENST00000580086 DIEXFQ68CQ4 756 aaKnown RBP11.95□□□□□ -0.5
MSL1-207ENST00000580086 CLSPNQ9HAW4 1339 aa11.81□□□□□ -0.52
MSL1-207ENST00000580086 APLP2Q06481 763 aa11.81□□□□□ -0.52
MSL1-207ENST00000580086 CSRNP3Q8WYN3 585 aa11.79□□□□□ -0.52
MSL1-207ENST00000580086 TRIM41Q8WV44 630 aa11.77□□□□□ -0.52
MSL1-207ENST00000580086 CCER1Q8TC90 406 aaPredicted RBP11.71□□□□□ -0.54
MSL1-207ENST00000580086 TSHZ2Q9NRE2 1034 aa11.71□□□□□ -0.54
MSL1-207ENST00000580086 SLC24A1O60721 1099 aa11.69□□□□□ -0.54
MSL1-207ENST00000580086 PLPPR3Q6T4P5 718 aa11.68□□□□□ -0.54
MSL1-207ENST00000580086 YTHDC1Q96MU7 727 aaKnown RBP11.67□□□□□ -0.54
MSL1-207ENST00000580086 ZNF316A6NFI3 1004 aaPredicted RBP11.66□□□□□ -0.54
MSL1-207ENST00000580086 ZCCHC6Q5VYS8 1495 aaKnown RBP11.65□□□□□ -0.54
MSL1-207ENST00000580086 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.65□□□□□ -0.54
MSL1-207ENST00000580086 SUPT16HQ9Y5B9 1047 aaKnown RBP11.63□□□□□ -0.55
MSL1-207ENST00000580086 MIER1Q8N108 512 aa11.56□□□□□ -0.56
MSL1-207ENST00000580086 MYT1LQ9UL68 1186 aa11.46□□□□□ -0.58
MSL1-207ENST00000580086 KCNA4P22459 653 aa11.42□□□□□ -0.58
MSL1-207ENST00000580086 RBM19Q9Y4C8 960 aaKnown RBP11.38□□□□□ -0.59
MSL1-207ENST00000580086 ANO8Q9HCE9 1232 aaPredicted RBP11.35□□□□□ -0.59
MSL1-207ENST00000580086 ERICH6BQ5W0A0 696 aa11.33□□□□□ -0.6
MSL1-207ENST00000580086 UBE2Q2Q8WVN8 375 aa11.3□□□□□ -0.6
MSL1-207ENST00000580086 MSH5O43196 834 aa11.3□□□□□ -0.6
MSL1-207ENST00000580086 FANCIQ9NVI1 1328 aa11.29□□□□□ -0.6
MSL1-207ENST00000580086 WRNQ14191 1432 aaPredicted RBP eCLIP11.28□□□□□ -0.6
MSL1-207ENST00000580086 RTN4Q9NQC3 1192 aaKnown RBP11.27□□□□□ -0.61
MSL1-207ENST00000580086 DEKP35659 375 aaKnown RBP11.26□□□□□ -0.61
MSL1-207ENST00000580086 SALL2Q9Y467 1007 aaPredicted RBP11.2□□□□□ -0.62
MSL1-207ENST00000580086 FKBP8Q14318 412 aa11.19□□□□□ -0.62
MSL1-207ENST00000580086 BCANQ96GW7 911 aa11.19□□□□□ -0.62
MSL1-207ENST00000580086 ABCC9O60706 1549 aa11.18□□□□□ -0.62
MSL1-207ENST00000580086 ADRA2BP18089 450 aa11.16□□□□□ -0.62
MSL1-207ENST00000580086 NEFLP07196 543 aa11.14□□□□□ -0.63
MSL1-207ENST00000580086 RB1CC1Q8TDY2 1594 aa11.1□□□□□ -0.63
MSL1-207ENST00000580086 EIF5BO60841 1220 aaKnown RBP11.07□□□□□ -0.64
MSL1-207ENST00000580086 CCDC136Q96JN2 1154 aa11.06□□□□□ -0.64
MSL1-207ENST00000580086 CDK11AQ9UQ88 783 aaPredicted RBP11.05□□□□□ -0.64
MSL1-207ENST00000580086 ITGAEP38570 1179 aa11.03□□□□□ -0.64
MSL1-207ENST00000580086 RSF1Q96T23 1441 aaPredicted RBP11.03□□□□□ -0.64
MSL1-207ENST00000580086 CEP162Q5TB80 1403 aa11.02□□□□□ -0.65
MSL1-207ENST00000580086 PKNOX2Q96KN3 472 aa10.98□□□□□ -0.65
MSL1-207ENST00000580086 NOP58Q9Y2X3 529 aaKnown RBP10.97□□□□□ -0.65
MSL1-207ENST00000580086 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.96□□□□□ -0.65
MSL1-207ENST00000580086 TNIKQ9UKE5 1360 aa10.96□□□□□ -0.65
MSL1-207ENST00000580086 IL27Q8NEV9 243 aa10.95□□□□□ -0.66
MSL1-207ENST00000580086 KCNH8Q96L42 1107 aa10.95□□□□□ -0.66
MSL1-207ENST00000580086 DCAF8L2P0C7V8 631 aa10.94□□□□□ -0.66
MSL1-207ENST00000580086 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
MSL1-207ENST00000580086 RTL5Q5HYW3 569 aaPredicted RBP10.93□□□□□ -0.66
MSL1-207ENST00000580086 NBR1Q14596 966 aa10.92□□□□□ -0.66
MSL1-207ENST00000580086 DHX57Q6P158 1386 aaKnown RBP10.9□□□□□ -0.66
MSL1-207ENST00000580086 DAXXQ9UER7 740 aaPredicted RBP10.9□□□□□ -0.66
MSL1-207ENST00000580086 C11orf95C9JLR9 678 aaPredicted RBP10.88□□□□□ -0.67
MSL1-207ENST00000580086 CCER2I3L3R5 266 aa10.88□□□□□ -0.67
MSL1-207ENST00000580086 WASHC2AQ641Q2 1341 aa10.85□□□□□ -0.67
MSL1-207ENST00000580086 EIF4G1Q04637 1599 aaKnown RBP10.84□□□□□ -0.67
MSL1-207ENST00000580086 PAK3O75914 559 aaPredicted RBP10.84□□□□□ -0.67
MSL1-207ENST00000580086 NACADO15069 1562 aa10.84□□□□□ -0.67
MSL1-207ENST00000580086 PPP4R2Q9NY27 417 aa10.83□□□□□ -0.68
MSL1-207ENST00000580086 WASHC2CQ9Y4E1 1318 aa10.81□□□□□ -0.68
MSL1-207ENST00000580086 EEA1Q15075 1411 aa10.81□□□□□ -0.68
MSL1-207ENST00000580086 GLIPR1L2Q4G1C9 344 aa10.8□□□□□ -0.68
MSL1-207ENST00000580086 TRIM52Q96A61 297 aa10.79□□□□□ -0.68
MSL1-207ENST00000580086 IPO9Q96P70 1041 aaKnown RBP10.79□□□□□ -0.68
MSL1-207ENST00000580086 USP35Q9P2H5 1018 aa10.79□□□□□ -0.68
MSL1-207ENST00000580086 RSPH6AQ9H0K4 717 aa10.78□□□□□ -0.68
MSL1-207ENST00000580086 PODXL2Q9NZ53 605 aa10.77□□□□□ -0.68
MSL1-207ENST00000580086 ANP32AP39687 249 aaKnown RBP10.77□□□□□ -0.69
MSL1-207ENST00000580086 GOLGA3Q08378 1498 aa10.77□□□□□ -0.69
MSL1-207ENST00000580086 ZBTB47Q9UFB7 747 aaPredicted RBP10.76□□□□□ -0.69
MSL1-207ENST00000580086 PPP1R15AO75807 674 aaPredicted RBP10.75□□□□□ -0.69
MSL1-207ENST00000580086 ANP32CO43423 234 aa10.74□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms