RNA–Protein interactions for RNA: ENST00000574096.1

NDC80-202, Transcript of NDC80, kinetochore complex component, humanhuman

TSL 3

Gene NDC80, Length 442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDC80-202ENST00000574096 AEBP2Q6ZN18 517 aaPredicted RBP35.86■■■■□ 3.33
NDC80-202ENST00000574096 CHIC1Q5VXU3 224 aa34.79■■■■□ 3.16
NDC80-202ENST00000574096 PHF23Q9BUL5 403 aaPredicted RBP30.61■■■□□ 2.49
NDC80-202ENST00000574096 SENP3Q9H4L4 574 aaPredicted RBP30.38■■■□□ 2.45
NDC80-202ENST00000574096 FOXD1Q16676 465 aa28.27■■■□□ 2.12
NDC80-202ENST00000574096 PLPPR3Q6T4P5 718 aa28.1■■■□□ 2.09
NDC80-202ENST00000574096 PPP6R1Q9UPN7 881 aa27.06■■□□□ 1.92
NDC80-202ENST00000574096 ADRA2BP18089 450 aa26.96■■□□□ 1.91
NDC80-202ENST00000574096 PIAS4Q8N2W9 510 aaPredicted RBP26.53■■□□□ 1.84
NDC80-202ENST00000574096 MSH5O43196 834 aa26.09■■□□□ 1.77
NDC80-202ENST00000574096 NISCHQ9Y2I1 1504 aa26.02■■□□□ 1.76
NDC80-202ENST00000574096 PPP4R3CPQ6ZMV5 832 aa24.74■■□□□ 1.55
NDC80-202ENST00000574096 SCAF1Q9H7N4 1312 aaKnown RBP24.59■■□□□ 1.53
NDC80-202ENST00000574096 MAPK8IP2Q13387 824 aaPredicted RBP24.54■■□□□ 1.52
NDC80-202ENST00000574096 DMRT2Q9Y5R5 561 aa24.26■■□□□ 1.47
NDC80-202ENST00000574096 POTEDQ86YR6 584 aa24.17■■□□□ 1.46
NDC80-202ENST00000574096 CNKSR2Q8WXI2 1034 aa24.1■■□□□ 1.45
NDC80-202ENST00000574096 NCBP3Q53F19 620 aaKnown RBP23.96■■□□□ 1.43
NDC80-202ENST00000574096 KCNA4P22459 653 aa23.95■■□□□ 1.42
NDC80-202ENST00000574096 NPM3O75607 178 aaKnown RBP23.71■■□□□ 1.39
NDC80-202ENST00000574096 HOXD11P31277 338 aaPredicted RBP23.7■■□□□ 1.38
NDC80-202ENST00000574096 RNF216Q9NWF9 866 aaPredicted RBP23.7■■□□□ 1.38
NDC80-202ENST00000574096 DNAJC5BQ9UF47 199 aa23.17■■□□□ 1.3
NDC80-202ENST00000574096 CCDC180Q9P1Z9 1646 aa23.11■■□□□ 1.29
NDC80-202ENST00000574096 DCAF8L1A6NGE4 600 aa23.04■■□□□ 1.28
NDC80-202ENST00000574096 ABCC9O60706 1549 aa22.92■■□□□ 1.26
NDC80-202ENST00000574096 SLC4A1APQ9BWU0 796 aaKnown RBP22.7■■□□□ 1.22
NDC80-202ENST00000574096 SLC4A2P04920 1241 aa22.48■■□□□ 1.19
NDC80-202ENST00000574096 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.44■■□□□ 1.18
NDC80-202ENST00000574096 RNF39Q9H2S5 420 aa22.39■■□□□ 1.17
NDC80-202ENST00000574096 U3KPZ7 1027 aaPredicted RBP22.17■■□□□ 1.14
NDC80-202ENST00000574096 ZBTB22O15209 634 aa22.09■■□□□ 1.13
NDC80-202ENST00000574096 FOXD4L1Q9NU39 408 aa22.08■■□□□ 1.13
NDC80-202ENST00000574096 C1QBPQ07021 282 aaKnown RBP22.07■■□□□ 1.12
NDC80-202ENST00000574096 RB1CC1Q8TDY2 1594 aa21.88■■□□□ 1.09
NDC80-202ENST00000574096 MYCNP04198 464 aaPredicted RBP21.88■■□□□ 1.09
NDC80-202ENST00000574096 CACNB1Q02641 598 aaPredicted RBP21.85■■□□□ 1.09
NDC80-202ENST00000574096 NACADO15069 1562 aa21.83■■□□□ 1.09
NDC80-202ENST00000574096 DCAF8L2P0C7V8 631 aa21.83■■□□□ 1.09
NDC80-202ENST00000574096 EHMT2Q96KQ7 1210 aa21.77■■□□□ 1.08
NDC80-202ENST00000574096 CSRNP3Q8WYN3 585 aa21.75■■□□□ 1.07
NDC80-202ENST00000574096 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.72■■□□□ 1.07
NDC80-202ENST00000574096 HNRNPUL2Q1KMD3 747 aaKnown RBP21.72■■□□□ 1.07
NDC80-202ENST00000574096 MYO15BQ96JP2 1530 aa21.65■■□□□ 1.06
NDC80-202ENST00000574096 SAMD1Q6SPF0 538 aaPredicted RBP21.65■■□□□ 1.06
NDC80-202ENST00000574096 ZCCHC6Q5VYS8 1495 aaKnown RBP21.64■■□□□ 1.05
NDC80-202ENST00000574096 SPINK5Q9NQ38 1064 aaPredicted RBP21.59■■□□□ 1.05
NDC80-202ENST00000574096 APLP2Q06481 763 aa21.51■■□□□ 1.03
NDC80-202ENST00000574096 DCAF1Q9Y4B6 1507 aa21.5■■□□□ 1.03
NDC80-202ENST00000574096 PABPN1Q86U42 306 aaKnown RBP eCLIP21.43■■□□□ 1.02
NDC80-202ENST00000574096 CAPN15O75808 1086 aa21.42■■□□□ 1.02
NDC80-202ENST00000574096 ATF5Q9Y2D1 282 aaPredicted RBP21.37■■□□□ 1.01
NDC80-202ENST00000574096 ATXN8OSP0DMR3 200 aa21.35■■□□□ 1.01
NDC80-202ENST00000574096 UNC13AQ9UPW8 1703 aa21.34■■□□□ 1.01
NDC80-202ENST00000574096 ZNF219Q9P2Y4 722 aaPredicted RBP21.31■■□□□ 1
NDC80-202ENST00000574096 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
NDC80-202ENST00000574096 TRHP20396 242 aaPredicted RBP21.28■■□□□ 1
NDC80-202ENST00000574096 DSG3P32926 999 aa21.23■□□□□ 0.99
NDC80-202ENST00000574096 SCRIBQ14160 1630 aa21.14■□□□□ 0.97
NDC80-202ENST00000574096 ABCB7O75027 752 aa21.03■□□□□ 0.96
NDC80-202ENST00000574096 SHROOM4Q9ULL8 1493 aa21■□□□□ 0.95
NDC80-202ENST00000574096 POLA2Q14181 598 aa20.93■□□□□ 0.94
NDC80-202ENST00000574096 EIF4G1Q04637 1599 aaKnown RBP20.72■□□□□ 0.91
NDC80-202ENST00000574096 CC2D2AQ9P2K1 1620 aa20.68■□□□□ 0.9
NDC80-202ENST00000574096 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
NDC80-202ENST00000574096 ZBTB12Q9Y330 459 aaPredicted RBP20.55■□□□□ 0.88
NDC80-202ENST00000574096 MKRN4PQ13434 485 aaPredicted RBP20.44■□□□□ 0.86
NDC80-202ENST00000574096 FBLN2P98095 1184 aa20.35■□□□□ 0.85
NDC80-202ENST00000574096 OSCARQ8IYS5 282 aa20.24■□□□□ 0.83
NDC80-202ENST00000574096 NCAPD3P42695 1498 aa20.21■□□□□ 0.83
NDC80-202ENST00000574096 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
NDC80-202ENST00000574096 ATAD2BQ9ULI0 1458 aa20.19■□□□□ 0.82
NDC80-202ENST00000574096 RBM42Q9BTD8 480 aaKnown RBP20.16■□□□□ 0.82
NDC80-202ENST00000574096 BAZ1AQ9NRL2 1556 aaPredicted RBP20.14■□□□□ 0.81
NDC80-202ENST00000574096 SMARCA2P51531 1590 aa20.08■□□□□ 0.81
NDC80-202ENST00000574096 MROH2BQ7Z745 1585 aa20.08■□□□□ 0.8
NDC80-202ENST00000574096 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
NDC80-202ENST00000574096 SPDYE2BA6NHP3 402 aa20.02■□□□□ 0.8
NDC80-202ENST00000574096 SPDYE6P0CI01 402 aa20.02■□□□□ 0.8
NDC80-202ENST00000574096 SPDYE2Q495Y8 402 aa20.02■□□□□ 0.8
NDC80-202ENST00000574096 PEG3Q9GZU2 1588 aa20.01■□□□□ 0.79
NDC80-202ENST00000574096 BAZ1BQ9UIG0 1483 aaKnown RBP19.97■□□□□ 0.79
NDC80-202ENST00000574096 AKT1S1Q96B36 256 aa19.91■□□□□ 0.78
NDC80-202ENST00000574096 SSUH2Q9Y2M2 353 aa19.9■□□□□ 0.78
NDC80-202ENST00000574096 ZNF692Q9BU19 519 aaPredicted RBP19.86■□□□□ 0.77
NDC80-202ENST00000574096 WIZO95785 1651 aa19.8■□□□□ 0.76
NDC80-202ENST00000574096 NESP48681 1621 aa19.8■□□□□ 0.76
NDC80-202ENST00000574096 RSF1Q96T23 1441 aaPredicted RBP19.79■□□□□ 0.76
NDC80-202ENST00000574096 SPDYE4A6NLX3 237 aa19.78■□□□□ 0.76
NDC80-202ENST00000574096 ERCC6Q03468 1493 aa19.72■□□□□ 0.75
NDC80-202ENST00000574096 REM2Q8IYK8 340 aaPredicted RBP19.71■□□□□ 0.75
NDC80-202ENST00000574096 LAMC3Q9Y6N6 1575 aa19.63■□□□□ 0.73
NDC80-202ENST00000574096 CADPSQ9ULU8 1353 aa19.6■□□□□ 0.73
NDC80-202ENST00000574096 FKBP8Q14318 412 aa19.59■□□□□ 0.73
NDC80-202ENST00000574096 CUX2O14529 1486 aa19.59■□□□□ 0.73
NDC80-202ENST00000574096 TOP2AP11388 1531 aaKnown RBP19.58■□□□□ 0.73
NDC80-202ENST00000574096 PROM2Q8N271 834 aa19.57■□□□□ 0.72
NDC80-202ENST00000574096 PDS5BQ9NTI5 1447 aa19.54■□□□□ 0.72
NDC80-202ENST00000574096 PITPNM1O00562 1244 aa19.5■□□□□ 0.71
NDC80-202ENST00000574096 THOC2Q8NI27 1593 aaKnown RBP19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms