RNA–Protein interactions for RNA: ENST00000570977.1

TOM1L1-208, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2

Gene TOM1L1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-208ENST00000570977 AEBP2Q6ZN18 517 aaPredicted RBP21.74■■□□□ 1.07
TOM1L1-208ENST00000570977 CHIC1Q5VXU3 224 aa21■□□□□ 0.95
TOM1L1-208ENST00000570977 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
TOM1L1-208ENST00000570977 SENP3Q9H4L4 574 aaPredicted RBP18.44■□□□□ 0.54
TOM1L1-208ENST00000570977 FOXD1Q16676 465 aa17.17■□□□□ 0.34
TOM1L1-208ENST00000570977 PLPPR3Q6T4P5 718 aa16.96■□□□□ 0.31
TOM1L1-208ENST00000570977 ADRA2BP18089 450 aa16.38■□□□□ 0.21
TOM1L1-208ENST00000570977 PPP6R1Q9UPN7 881 aa16.38■□□□□ 0.21
TOM1L1-208ENST00000570977 PIAS4Q8N2W9 510 aaPredicted RBP16.18■□□□□ 0.18
TOM1L1-208ENST00000570977 MSH5O43196 834 aa15.87■□□□□ 0.13
TOM1L1-208ENST00000570977 PPP4R3CPQ6ZMV5 832 aa14.95□□□□□ -0.02
TOM1L1-208ENST00000570977 MAPK8IP2Q13387 824 aaPredicted RBP14.93□□□□□ -0.02
TOM1L1-208ENST00000570977 SCAF1Q9H7N4 1312 aaKnown RBP14.9□□□□□ -0.02
TOM1L1-208ENST00000570977 POTEDQ86YR6 584 aa14.85□□□□□ -0.03
TOM1L1-208ENST00000570977 NISCHQ9Y2I1 1504 aa14.82□□□□□ -0.04
TOM1L1-208ENST00000570977 DMRT2Q9Y5R5 561 aa14.68□□□□□ -0.06
TOM1L1-208ENST00000570977 CNKSR2Q8WXI2 1034 aa14.54□□□□□ -0.08
TOM1L1-208ENST00000570977 NCBP3Q53F19 620 aaKnown RBP14.46□□□□□ -0.09
TOM1L1-208ENST00000570977 KCNA4P22459 653 aa14.41□□□□□ -0.1
TOM1L1-208ENST00000570977 NPM3O75607 178 aaKnown RBP14.3□□□□□ -0.12
TOM1L1-208ENST00000570977 RNF216Q9NWF9 866 aaPredicted RBP14.29□□□□□ -0.12
TOM1L1-208ENST00000570977 HOXD11P31277 338 aaPredicted RBP14.28□□□□□ -0.12
TOM1L1-208ENST00000570977 DCAF8L1A6NGE4 600 aa14.18□□□□□ -0.14
TOM1L1-208ENST00000570977 ABCC9O60706 1549 aa13.86□□□□□ -0.19
TOM1L1-208ENST00000570977 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
TOM1L1-208ENST00000570977 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.68□□□□□ -0.229e-8■□□□□ 10.2
TOM1L1-208ENST00000570977 SLC4A1APQ9BWU0 796 aaKnown RBP13.68□□□□□ -0.22
TOM1L1-208ENST00000570977 RNF39Q9H2S5 420 aa13.58□□□□□ -0.24
TOM1L1-208ENST00000570977 SLC4A2P04920 1241 aa13.54□□□□□ -0.24
TOM1L1-208ENST00000570977 CACNB1Q02641 598 aaPredicted RBP13.43□□□□□ -0.26
TOM1L1-208ENST00000570977 U3KPZ7 1027 aaPredicted RBP13.43□□□□□ -0.26
TOM1L1-208ENST00000570977 CCDC180Q9P1Z9 1646 aa13.41□□□□□ -0.26
TOM1L1-208ENST00000570977 C1QBPQ07021 282 aaKnown RBP13.38□□□□□ -0.27
TOM1L1-208ENST00000570977 FOXD4L1Q9NU39 408 aa13.28□□□□□ -0.28
TOM1L1-208ENST00000570977 ZBTB22O15209 634 aa13.26□□□□□ -0.29
TOM1L1-208ENST00000570977 MYCNP04198 464 aaPredicted RBP13.2□□□□□ -0.3
TOM1L1-208ENST00000570977 EHMT2Q96KQ7 1210 aa13.15□□□□□ -0.3
TOM1L1-208ENST00000570977 SPINK5Q9NQ38 1064 aaPredicted RBP13.14□□□□□ -0.31
TOM1L1-208ENST00000570977 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.12□□□□□ -0.31
TOM1L1-208ENST00000570977 HNRNPUL2Q1KMD3 747 aaKnown RBP13.12□□□□□ -0.31
TOM1L1-208ENST00000570977 CAPN15O75808 1086 aa13.11□□□□□ -0.31
TOM1L1-208ENST00000570977 SAMD1Q6SPF0 538 aaPredicted RBP13.08□□□□□ -0.32
TOM1L1-208ENST00000570977 APLP2Q06481 763 aa13.03□□□□□ -0.32
TOM1L1-208ENST00000570977 TRHP20396 242 aaPredicted RBP13.01□□□□□ -0.33
TOM1L1-208ENST00000570977 RB1CC1Q8TDY2 1594 aa13.01□□□□□ -0.33
TOM1L1-208ENST00000570977 CSRNP3Q8WYN3 585 aa12.99□□□□□ -0.33
TOM1L1-208ENST00000570977 ZNF219Q9P2Y4 722 aaPredicted RBP12.92□□□□□ -0.34
TOM1L1-208ENST00000570977 ATF5Q9Y2D1 282 aaPredicted RBP12.91□□□□□ -0.34
TOM1L1-208ENST00000570977 PABPN1Q86U42 306 aaKnown RBP eCLIP12.89□□□□□ -0.35
TOM1L1-208ENST00000570977 ABCB7O75027 752 aa12.88□□□□□ -0.35
TOM1L1-208ENST00000570977 DSG3P32926 999 aa12.88□□□□□ -0.35
TOM1L1-208ENST00000570977 NACADO15069 1562 aa12.85□□□□□ -0.35
TOM1L1-208ENST00000570977 ATXN8OSP0DMR3 200 aa12.76□□□□□ -0.37
TOM1L1-208ENST00000570977 DNAJC5Q9H3Z4 198 aa12.74□□□□□ -0.37
TOM1L1-208ENST00000570977 POLA2Q14181 598 aa12.71□□□□□ -0.37
TOM1L1-208ENST00000570977 DCAF8L2P0C7V8 631 aa12.68□□□□□ -0.38
TOM1L1-208ENST00000570977 BICRAQ9NZM4 1560 aa12.67□□□□□ -0.38
TOM1L1-208ENST00000570977 UNC13AQ9UPW8 1703 aa12.61□□□□□ -0.39
TOM1L1-208ENST00000570977 MYO15BQ96JP2 1530 aa12.59□□□□□ -0.39
TOM1L1-208ENST00000570977 CECR2Q9BXF3 1484 aa12.56□□□□□ -0.4
TOM1L1-208ENST00000570977 CC2D2AQ9P2K1 1620 aa12.49□□□□□ -0.41
TOM1L1-208ENST00000570977 SHROOM4Q9ULL8 1493 aa12.49□□□□□ -0.41
TOM1L1-208ENST00000570977 ZBTB12Q9Y330 459 aaPredicted RBP12.42□□□□□ -0.42
TOM1L1-208ENST00000570977 EIF4G1Q04637 1599 aaKnown RBP12.37□□□□□ -0.43
TOM1L1-208ENST00000570977 FBLN2P98095 1184 aa12.34□□□□□ -0.43
TOM1L1-208ENST00000570977 OSCARQ8IYS5 282 aa12.32□□□□□ -0.44
TOM1L1-208ENST00000570977 MKRN4PQ13434 485 aaPredicted RBP12.31□□□□□ -0.44
TOM1L1-208ENST00000570977 RBM42Q9BTD8 480 aaKnown RBP12.25□□□□□ -0.45
TOM1L1-208ENST00000570977 DCAF1Q9Y4B6 1507 aa12.25□□□□□ -0.45
TOM1L1-208ENST00000570977 CUX2O14529 1486 aa12.17□□□□□ -0.46
TOM1L1-208ENST00000570977 ZCCHC6Q5VYS8 1495 aaKnown RBP12.17□□□□□ -0.46
TOM1L1-208ENST00000570977 SCRIBQ14160 1630 aa12.17□□□□□ -0.46
TOM1L1-208ENST00000570977 SPDYE2BA6NHP3 402 aa12.08□□□□□ -0.48
TOM1L1-208ENST00000570977 SPDYE6P0CI01 402 aa12.08□□□□□ -0.48
TOM1L1-208ENST00000570977 SPDYE2Q495Y8 402 aa12.08□□□□□ -0.48
TOM1L1-208ENST00000570977 AKT1S1Q96B36 256 aa12.05□□□□□ -0.48
TOM1L1-208ENST00000570977 ZNF692Q9BU19 519 aaPredicted RBP12.05□□□□□ -0.48
TOM1L1-208ENST00000570977 ERCC6Q03468 1493 aa11.99□□□□□ -0.49
TOM1L1-208ENST00000570977 REM2Q8IYK8 340 aaPredicted RBP11.97□□□□□ -0.49
TOM1L1-208ENST00000570977 SSUH2Q9Y2M2 353 aa11.97□□□□□ -0.49
TOM1L1-208ENST00000570977 SPDYE4A6NLX3 237 aa11.94□□□□□ -0.5
TOM1L1-208ENST00000570977 NCAPD3P42695 1498 aa11.93□□□□□ -0.5
TOM1L1-208ENST00000570977 TRIM41Q8WV44 630 aa11.88□□□□□ -0.51
TOM1L1-208ENST00000570977 PITPNM1O00562 1244 aa11.87□□□□□ -0.51
TOM1L1-208ENST00000570977 CHRDL2Q6WN34 429 aa11.86□□□□□ -0.51
TOM1L1-208ENST00000570977 CLEC11AQ9Y240 323 aa11.84□□□□□ -0.51
TOM1L1-208ENST00000570977 FKBP8Q14318 412 aa11.81□□□□□ -0.52
TOM1L1-208ENST00000570977 NESP48681 1621 aa11.79□□□□□ -0.52
TOM1L1-208ENST00000570977 ATAD2BQ9ULI0 1458 aa11.79□□□□□ -0.52
TOM1L1-208ENST00000570977 SPDYE1Q8NFV5 336 aaPredicted RBP11.79□□□□□ -0.52
TOM1L1-208ENST00000570977 SLC24A1O60721 1099 aa11.77□□□□□ -0.53
TOM1L1-208ENST00000570977 THOC2Q8NI27 1593 aaKnown RBP11.72□□□□□ -0.53
TOM1L1-208ENST00000570977 HMGXB3Q12766 1538 aa11.72□□□□□ -0.53
TOM1L1-208ENST00000570977 POTEHQ6S545 545 aa11.72□□□□□ -0.53
TOM1L1-208ENST00000570977 SMARCA2P51531 1590 aa11.7□□□□□ -0.54
TOM1L1-208ENST00000570977 PIP4P2Q8N4L2 257 aa11.67□□□□□ -0.54
TOM1L1-208ENST00000570977 LAMC3Q9Y6N6 1575 aa11.64□□□□□ -0.55
TOM1L1-208ENST00000570977 PDS5BQ9NTI5 1447 aa11.64□□□□□ -0.55
TOM1L1-208ENST00000570977 PRR29P0C7W0 189 aa11.64□□□□□ -0.55
TOM1L1-208ENST00000570977 PROM2Q8N271 834 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms