RNA–Protein interactions for RNA: ENST00000569376.5

TNRC6A-217, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 5

Gene TNRC6A, Length 610 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-217ENST00000569376 AEBP2Q6ZN18 517 aaPredicted RBP19.88■□□□□ 0.77
TNRC6A-217ENST00000569376 CHIC1Q5VXU3 224 aa18.82■□□□□ 0.6
TNRC6A-217ENST00000569376 SENP3Q9H4L4 574 aaPredicted RBP17.06■□□□□ 0.32
TNRC6A-217ENST00000569376 PHF23Q9BUL5 403 aaPredicted RBP16.79■□□□□ 0.28
TNRC6A-217ENST00000569376 FOXD1Q16676 465 aa15.87■□□□□ 0.13
TNRC6A-217ENST00000569376 PLPPR3Q6T4P5 718 aa15.01□□□□□ -0.01
TNRC6A-217ENST00000569376 MSH5O43196 834 aa14.96□□□□□ -0.01
TNRC6A-217ENST00000569376 PIAS4Q8N2W9 510 aaPredicted RBP14.81□□□□□ -0.04
TNRC6A-217ENST00000569376 POTEDQ86YR6 584 aa14.75□□□□□ -0.05
TNRC6A-217ENST00000569376 PPP6R1Q9UPN7 881 aa14.71□□□□□ -0.05
TNRC6A-217ENST00000569376 ADRA2BP18089 450 aa14.66□□□□□ -0.06
TNRC6A-217ENST00000569376 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
TNRC6A-217ENST00000569376 MAPK8IP2Q13387 824 aaPredicted RBP13.49□□□□□ -0.25
TNRC6A-217ENST00000569376 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
TNRC6A-217ENST00000569376 PPP4R3CPQ6ZMV5 832 aa13.11□□□□□ -0.31
TNRC6A-217ENST00000569376 HOXD11P31277 338 aaPredicted RBP12.96□□□□□ -0.33
TNRC6A-217ENST00000569376 CNKSR2Q8WXI2 1034 aa12.92□□□□□ -0.34
TNRC6A-217ENST00000569376 DCAF8L1A6NGE4 600 aa12.91□□□□□ -0.34
TNRC6A-217ENST00000569376 CACNB1Q02641 598 aaPredicted RBP12.88□□□□□ -0.35
TNRC6A-217ENST00000569376 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
TNRC6A-217ENST00000569376 NISCHQ9Y2I1 1504 aa12.79□□□□□ -0.36
TNRC6A-217ENST00000569376 RNF39Q9H2S5 420 aa12.72□□□□□ -0.37
TNRC6A-217ENST00000569376 NCBP3Q53F19 620 aaKnown RBP12.62□□□□□ -0.39
TNRC6A-217ENST00000569376 DNAJC5BQ9UF47 199 aa12.6□□□□□ -0.39
TNRC6A-217ENST00000569376 C1QBPQ07021 282 aaKnown RBP12.57□□□□□ -0.4
TNRC6A-217ENST00000569376 ABCC9O60706 1549 aa12.54□□□□□ -0.4
TNRC6A-217ENST00000569376 NPM3O75607 178 aaKnown RBP12.37□□□□□ -0.43
TNRC6A-217ENST00000569376 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.33□□□□□ -0.441e-8■■□□□ 11.9
TNRC6A-217ENST00000569376 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
TNRC6A-217ENST00000569376 U3KPZ7 1027 aaPredicted RBP12.04□□□□□ -0.48
TNRC6A-217ENST00000569376 KCNA4P22459 653 aa12.02□□□□□ -0.49
TNRC6A-217ENST00000569376 CAPN15O75808 1086 aa11.9□□□□□ -0.5
TNRC6A-217ENST00000569376 SPINK5Q9NQ38 1064 aaPredicted RBP11.88□□□□□ -0.51
TNRC6A-217ENST00000569376 DSG3P32926 999 aa11.86□□□□□ -0.51
TNRC6A-217ENST00000569376 SLC4A2P04920 1241 aa11.84□□□□□ -0.51
TNRC6A-217ENST00000569376 CCDC180Q9P1Z9 1646 aa11.79□□□□□ -0.52
TNRC6A-217ENST00000569376 APLP2Q06481 763 aa11.79□□□□□ -0.52
TNRC6A-217ENST00000569376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.74□□□□□ -0.53
TNRC6A-217ENST00000569376 HNRNPUL2Q1KMD3 747 aaKnown RBP11.74□□□□□ -0.53
TNRC6A-217ENST00000569376 ZNF219Q9P2Y4 722 aaPredicted RBP11.69□□□□□ -0.54
TNRC6A-217ENST00000569376 TRHP20396 242 aaPredicted RBP11.66□□□□□ -0.54
TNRC6A-217ENST00000569376 RB1CC1Q8TDY2 1594 aa11.64□□□□□ -0.55
TNRC6A-217ENST00000569376 SAMD1Q6SPF0 538 aaPredicted RBP11.64□□□□□ -0.55
TNRC6A-217ENST00000569376 PABPN1Q86U42 306 aaKnown RBP eCLIP11.61□□□□□ -0.55
TNRC6A-217ENST00000569376 ABCB7O75027 752 aa11.57□□□□□ -0.56
TNRC6A-217ENST00000569376 POTEHQ6S545 545 aa11.55□□□□□ -0.56
TNRC6A-217ENST00000569376 MYCNP04198 464 aaPredicted RBP11.48□□□□□ -0.57
TNRC6A-217ENST00000569376 CECR2Q9BXF3 1484 aa11.39□□□□□ -0.59
TNRC6A-217ENST00000569376 RBM42Q9BTD8 480 aaKnown RBP11.38□□□□□ -0.59
TNRC6A-217ENST00000569376 NACADO15069 1562 aa11.37□□□□□ -0.59
TNRC6A-217ENST00000569376 SLC4A1APQ9BWU0 796 aaKnown RBP11.36□□□□□ -0.59
TNRC6A-217ENST00000569376 POLA2Q14181 598 aa11.34□□□□□ -0.59
TNRC6A-217ENST00000569376 UNC13AQ9UPW8 1703 aa11.32□□□□□ -0.6
TNRC6A-217ENST00000569376 DCAF8L2P0C7V8 631 aa11.31□□□□□ -0.6
TNRC6A-217ENST00000569376 CC2D2AQ9P2K1 1620 aa11.29□□□□□ -0.6
TNRC6A-217ENST00000569376 FOXD4L1Q9NU39 408 aa11.28□□□□□ -0.6
TNRC6A-217ENST00000569376 TRIM41Q8WV44 630 aa11.24□□□□□ -0.61
TNRC6A-217ENST00000569376 BICRAQ9NZM4 1560 aa11.24□□□□□ -0.61
TNRC6A-217ENST00000569376 ZBTB12Q9Y330 459 aaPredicted RBP11.16□□□□□ -0.62
TNRC6A-217ENST00000569376 ATF5Q9Y2D1 282 aaPredicted RBP11.15□□□□□ -0.62
TNRC6A-217ENST00000569376 CUX2O14529 1486 aa11.14□□□□□ -0.63
TNRC6A-217ENST00000569376 CHRDL2Q6WN34 429 aa11.13□□□□□ -0.63
TNRC6A-217ENST00000569376 ZBTB22O15209 634 aa11.08□□□□□ -0.64
TNRC6A-217ENST00000569376 AKT1S1Q96B36 256 aa11.07□□□□□ -0.64
TNRC6A-217ENST00000569376 EIF4G1Q04637 1599 aaKnown RBP11.06□□□□□ -0.64
TNRC6A-217ENST00000569376 SHROOM4Q9ULL8 1493 aa11.06□□□□□ -0.64
TNRC6A-217ENST00000569376 ATXN8OSP0DMR3 200 aa10.99□□□□□ -0.65
TNRC6A-217ENST00000569376 OSCARQ8IYS5 282 aa10.95□□□□□ -0.66
TNRC6A-217ENST00000569376 REM2Q8IYK8 340 aaPredicted RBP10.94□□□□□ -0.66
TNRC6A-217ENST00000569376 MYO15BQ96JP2 1530 aa10.94□□□□□ -0.66
TNRC6A-217ENST00000569376 ERCC6Q03468 1493 aa10.93□□□□□ -0.66
TNRC6A-217ENST00000569376 FBLN2P98095 1184 aa10.82□□□□□ -0.68
TNRC6A-217ENST00000569376 PIP4P2Q8N4L2 257 aa10.82□□□□□ -0.68
TNRC6A-217ENST00000569376 PITPNM1O00562 1244 aa10.8□□□□□ -0.68
TNRC6A-217ENST00000569376 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
TNRC6A-217ENST00000569376 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
TNRC6A-217ENST00000569376 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
TNRC6A-217ENST00000569376 SP7Q8TDD2 431 aaPredicted RBP10.77□□□□□ -0.69
TNRC6A-217ENST00000569376 FXR2P51116 673 aaKnown RBP eCLIP10.76□□□□□ -0.69
TNRC6A-217ENST00000569376 SCRIBQ14160 1630 aa10.73□□□□□ -0.69
TNRC6A-217ENST00000569376 HAX1O00165 279 aa10.67□□□□□ -0.7
TNRC6A-217ENST00000569376 CSRNP3Q8WYN3 585 aa10.67□□□□□ -0.7
TNRC6A-217ENST00000569376 MKRN4PQ13434 485 aaPredicted RBP10.65□□□□□ -0.7
TNRC6A-217ENST00000569376 SPDYE1Q8NFV5 336 aaPredicted RBP10.63□□□□□ -0.71
TNRC6A-217ENST00000569376 ZNF692Q9BU19 519 aaPredicted RBP10.61□□□□□ -0.71
TNRC6A-217ENST00000569376 SSUH2Q9Y2M2 353 aa10.6□□□□□ -0.71
TNRC6A-217ENST00000569376 EHMT2Q96KQ7 1210 aa10.59□□□□□ -0.71
TNRC6A-217ENST00000569376 CLEC11AQ9Y240 323 aa10.57□□□□□ -0.72
TNRC6A-217ENST00000569376 THOC2Q8NI27 1593 aaKnown RBP10.54□□□□□ -0.72
TNRC6A-217ENST00000569376 PRKAR2AP13861 404 aaKnown RBP10.53□□□□□ -0.72
TNRC6A-217ENST00000569376 NESP48681 1621 aa10.53□□□□□ -0.72
TNRC6A-217ENST00000569376 DCAF1Q9Y4B6 1507 aa10.51□□□□□ -0.73
TNRC6A-217ENST00000569376 NCAPD3P42695 1498 aa10.5□□□□□ -0.73
TNRC6A-217ENST00000569376 EVX2Q03828 476 aa10.48□□□□□ -0.73
TNRC6A-217ENST00000569376 BAZ1AQ9NRL2 1556 aaPredicted RBP10.47□□□□□ -0.73
TNRC6A-217ENST00000569376 ILDR1Q86SU0 546 aaPredicted RBP10.45□□□□□ -0.74
TNRC6A-217ENST00000569376 SMARCA2P51531 1590 aa10.44□□□□□ -0.74
TNRC6A-217ENST00000569376 C19orf67A6NJJ6 358 aa10.42□□□□□ -0.74
TNRC6A-217ENST00000569376 RIMBP3CA6NJZ7 1639 aa10.42□□□□□ -0.74
TNRC6A-217ENST00000569376 RIMBP3BA6NNM3 1639 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms