RNA–Protein interactions for RNA: ENST00000567662.5

GRAMD2A-210, Transcript of GRAM domain containing 2A, humanhuman

TSL 2

Gene GRAMD2A, Length 2,878 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD2A-210ENST00000567662 NISCHQ9Y2I1 1504 aa22.83■■□□□ 1.25
GRAMD2A-210ENST00000567662 SHROOM4Q9ULL8 1493 aa19.95■□□□□ 0.78
GRAMD2A-210ENST00000567662 SUPT5HO00267 1087 aaKnown RBP19.63■□□□□ 0.73
GRAMD2A-210ENST00000567662 ZCCHC6Q5VYS8 1495 aaKnown RBP19.34■□□□□ 0.69
GRAMD2A-210ENST00000567662 DCAF8L2P0C7V8 631 aa19.2■□□□□ 0.66
GRAMD2A-210ENST00000567662 CCDC180Q9P1Z9 1646 aa19.19■□□□□ 0.66
GRAMD2A-210ENST00000567662 MYO15BQ96JP2 1530 aa19.11■□□□□ 0.65
GRAMD2A-210ENST00000567662 CHIC1Q5VXU3 224 aa19.05■□□□□ 0.64
GRAMD2A-210ENST00000567662 HRCP23327 699 aa18.83■□□□□ 0.61
GRAMD2A-210ENST00000567662 PCGF6Q9BYE7 350 aa18.81■□□□□ 0.6
GRAMD2A-210ENST00000567662 LOC105371045A0A1W2PR82 267 aa18.63■□□□□ 0.57
GRAMD2A-210ENST00000567662 DCAF1Q9Y4B6 1507 aa18.62■□□□□ 0.57
GRAMD2A-210ENST00000567662 PPARGC1BQ86YN6 1023 aaKnown RBP18.6■□□□□ 0.57
GRAMD2A-210ENST00000567662 ABCC9O60706 1549 aa18.31■□□□□ 0.52
GRAMD2A-210ENST00000567662 SCRIBQ14160 1630 aa18.28■□□□□ 0.52
GRAMD2A-210ENST00000567662 TRIM26Q12899 539 aaPredicted RBP18.24■□□□□ 0.51
GRAMD2A-210ENST00000567662 RSF1Q96T23 1441 aaPredicted RBP18.21■□□□□ 0.5
GRAMD2A-210ENST00000567662 FAM9AQ8IZU1 332 aaPredicted RBP18.19■□□□□ 0.5
GRAMD2A-210ENST00000567662 EHMT2Q96KQ7 1210 aa18.17■□□□□ 0.5
GRAMD2A-210ENST00000567662 TRIM41Q8WV44 630 aa18.16■□□□□ 0.5
GRAMD2A-210ENST00000567662 RB1CC1Q8TDY2 1594 aa18.12■□□□□ 0.49
GRAMD2A-210ENST00000567662 CECR2Q9BXF3 1484 aa17.92■□□□□ 0.46
GRAMD2A-210ENST00000567662 ZEB1P37275 1124 aaPredicted RBP17.85■□□□□ 0.45
GRAMD2A-210ENST00000567662 MROH2BQ7Z745 1585 aa17.84■□□□□ 0.45
GRAMD2A-210ENST00000567662 PELP1Q8IZL8 1130 aaKnown RBP17.79■□□□□ 0.44
GRAMD2A-210ENST00000567662 WIZO95785 1651 aa17.78■□□□□ 0.44
GRAMD2A-210ENST00000567662 NACADO15069 1562 aa17.72■□□□□ 0.43
GRAMD2A-210ENST00000567662 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.63■□□□□ 0.41
GRAMD2A-210ENST00000567662 TTBK1Q5TCY1 1321 aaPredicted RBP17.62■□□□□ 0.41
GRAMD2A-210ENST00000567662 BAZ1AQ9NRL2 1556 aaPredicted RBP17.58■□□□□ 0.4
GRAMD2A-210ENST00000567662 SCAF1Q9H7N4 1312 aaKnown RBP17.58■□□□□ 0.4
GRAMD2A-210ENST00000567662 CCER1Q8TC90 406 aaPredicted RBP17.54■□□□□ 0.4
GRAMD2A-210ENST00000567662 EIF4G1Q04637 1599 aaKnown RBP17.53■□□□□ 0.4
GRAMD2A-210ENST00000567662 ABCC8Q09428 1581 aa17.53■□□□□ 0.4
GRAMD2A-210ENST00000567662 CCDC88BA6NC98 1476 aa17.47■□□□□ 0.39
GRAMD2A-210ENST00000567662 MYT1Q01538 1121 aa17.42■□□□□ 0.38
GRAMD2A-210ENST00000567662 TOP2AP11388 1531 aaKnown RBP17.39■□□□□ 0.37
GRAMD2A-210ENST00000567662 SOGA1O94964 1423 aa17.38■□□□□ 0.37
GRAMD2A-210ENST00000567662 CEP162Q5TB80 1403 aa17.37■□□□□ 0.37
GRAMD2A-210ENST00000567662 SMARCA4P51532 1647 aa17.36■□□□□ 0.37
GRAMD2A-210ENST00000567662 SMARCA2P51531 1590 aa17.35■□□□□ 0.37
GRAMD2A-210ENST00000567662 RUSC2Q8N2Y8 1516 aa17.31■□□□□ 0.36
GRAMD2A-210ENST00000567662 UBTFP17480 764 aaKnown RBP17.31■□□□□ 0.36
GRAMD2A-210ENST00000567662 NEUROD1Q13562 356 aa17.3■□□□□ 0.36
GRAMD2A-210ENST00000567662 DIEXFQ68CQ4 756 aaKnown RBP17.29■□□□□ 0.36
GRAMD2A-210ENST00000567662 WRNQ14191 1432 aaPredicted RBP eCLIP17.28■□□□□ 0.36
GRAMD2A-210ENST00000567662 ACIN1Q9UKV3 1341 aaKnown RBP17.27■□□□□ 0.35
GRAMD2A-210ENST00000567662 UNC13AQ9UPW8 1703 aa17.26■□□□□ 0.35
GRAMD2A-210ENST00000567662 CSRNP3Q8WYN3 585 aa17.25■□□□□ 0.35
GRAMD2A-210ENST00000567662 TNIKQ9UKE5 1360 aa17.23■□□□□ 0.35
GRAMD2A-210ENST00000567662 PABPN1Q86U42 306 aaKnown RBP eCLIP17.22■□□□□ 0.35
GRAMD2A-210ENST00000567662 GTF3C3Q9Y5Q9 886 aa17.14■□□□□ 0.34
GRAMD2A-210ENST00000567662 GOLGA3Q08378 1498 aa17.12■□□□□ 0.33
GRAMD2A-210ENST00000567662 EEA1Q15075 1411 aa17.12■□□□□ 0.33
GRAMD2A-210ENST00000567662 HNRNPUL2Q1KMD3 747 aaKnown RBP17.11■□□□□ 0.33
GRAMD2A-210ENST00000567662 CENPBP07199 599 aaPredicted RBP17.1■□□□□ 0.33
GRAMD2A-210ENST00000567662 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
GRAMD2A-210ENST00000567662 ZNF316A6NFI3 1004 aaPredicted RBP17.06■□□□□ 0.32
GRAMD2A-210ENST00000567662 YTHDC1Q96MU7 727 aaKnown RBP17.06■□□□□ 0.32
GRAMD2A-210ENST00000567662 SYNJ1O43426 1573 aa17.04■□□□□ 0.32
GRAMD2A-210ENST00000567662 BICRAQ9NZM4 1560 aa17.01■□□□□ 0.31
GRAMD2A-210ENST00000567662 CLIP1P30622 1438 aa16.99■□□□□ 0.31
GRAMD2A-210ENST00000567662 CEP164Q9UPV0 1460 aa16.99■□□□□ 0.31
GRAMD2A-210ENST00000567662 KIF21BO75037 1637 aa16.93■□□□□ 0.3
GRAMD2A-210ENST00000567662 RAPGEF2Q9Y4G8 1499 aa16.92■□□□□ 0.3
GRAMD2A-210ENST00000567662 MIER1Q8N108 512 aa16.92■□□□□ 0.3
GRAMD2A-210ENST00000567662 APLP2Q06481 763 aa16.91■□□□□ 0.3
GRAMD2A-210ENST00000567662 VPS8Q8N3P4 1428 aa16.9■□□□□ 0.3
GRAMD2A-210ENST00000567662 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.3
GRAMD2A-210ENST00000567662 ATAD2BQ9ULI0 1458 aa16.87■□□□□ 0.29
GRAMD2A-210ENST00000567662 BAZ1BQ9UIG0 1483 aaKnown RBP16.86■□□□□ 0.29
GRAMD2A-210ENST00000567662 PRKCSHP14314 528 aaPredicted RBP16.81■□□□□ 0.28
GRAMD2A-210ENST00000567662 TOP2BQ02880 1626 aa16.72■□□□□ 0.27
GRAMD2A-210ENST00000567662 KANK4Q5T7N3 995 aaPredicted RBP16.71■□□□□ 0.27
GRAMD2A-210ENST00000567662 ARAP1Q96P48 1450 aa16.68■□□□□ 0.26
GRAMD2A-210ENST00000567662 DHX57Q6P158 1386 aaKnown RBP16.66■□□□□ 0.26
GRAMD2A-210ENST00000567662 BIVM-ERCC5R4GMW8 1640 aa16.63■□□□□ 0.25
GRAMD2A-210ENST00000567662 ITGAEP38570 1179 aa16.63■□□□□ 0.25
GRAMD2A-210ENST00000567662 PRXQ9BXM0 1461 aa16.63■□□□□ 0.25
GRAMD2A-210ENST00000567662 ERICH3Q5RHP9 1530 aa16.6■□□□□ 0.25
GRAMD2A-210ENST00000567662 CUX1P39880 1505 aa16.58■□□□□ 0.24
GRAMD2A-210ENST00000567662 CLSPNQ9HAW4 1339 aa16.53■□□□□ 0.24
GRAMD2A-210ENST00000567662 KIF27Q86VH2 1401 aa16.53■□□□□ 0.24
GRAMD2A-210ENST00000567662 RRBP1Q9P2E9 1410 aaKnown RBP16.5■□□□□ 0.23
GRAMD2A-210ENST00000567662 ARHGAP35Q9NRY4 1499 aa16.5■□□□□ 0.23
GRAMD2A-210ENST00000567662 CCNB3Q8WWL7 1395 aa16.49■□□□□ 0.23
GRAMD2A-210ENST00000567662 NCAPD3P42695 1498 aa16.43■□□□□ 0.22
GRAMD2A-210ENST00000567662 SUPT16HQ9Y5B9 1047 aaKnown RBP16.42■□□□□ 0.22
GRAMD2A-210ENST00000567662 HMGXB3Q12766 1538 aa16.42■□□□□ 0.22
GRAMD2A-210ENST00000567662 KCNH8Q96L42 1107 aa16.42■□□□□ 0.22
GRAMD2A-210ENST00000567662 RAB3GAP2Q9H2M9 1393 aa16.41■□□□□ 0.22
GRAMD2A-210ENST00000567662 CFTRP13569 1480 aa16.4■□□□□ 0.22
GRAMD2A-210ENST00000567662 CUX2O14529 1486 aa16.39■□□□□ 0.21
GRAMD2A-210ENST00000567662 BCL11AQ9H165 835 aa16.38■□□□□ 0.21
GRAMD2A-210ENST00000567662 P3H3Q8IVL6 736 aa16.36■□□□□ 0.21
GRAMD2A-210ENST00000567662 ATP1B4Q9UN42 357 aaPredicted RBP16.36■□□□□ 0.21
GRAMD2A-210ENST00000567662 MAPKBP1O60336 1514 aa16.35■□□□□ 0.21
GRAMD2A-210ENST00000567662 FAM50AQ14320 339 aaKnown RBP16.35■□□□□ 0.21
GRAMD2A-210ENST00000567662 IGF1RP08069 1367 aa16.35■□□□□ 0.21
GRAMD2A-210ENST00000567662 SIN3AQ96ST3 1273 aa16.33■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 75.5 ms