RNA–Protein interactions for RNA: ENST00000566495.1

BBS2-216, Transcript of Bardet-Biedl syndrome 2, humanhuman

TSL 5

Gene BBS2, Length 766 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS2-216ENST00000566495 AEBP2Q6ZN18 517 aaPredicted RBP27.24■■□□□ 1.95
BBS2-216ENST00000566495 CHIC1Q5VXU3 224 aa25.77■■□□□ 1.72
BBS2-216ENST00000566495 SENP3Q9H4L4 574 aaPredicted RBP23.47■■□□□ 1.35
BBS2-216ENST00000566495 PHF23Q9BUL5 403 aaPredicted RBP23.06■■□□□ 1.28
BBS2-216ENST00000566495 FOXD1Q16676 465 aa21.78■■□□□ 1.08
BBS2-216ENST00000566495 MSH5O43196 834 aa20.63■□□□□ 0.89
BBS2-216ENST00000566495 PLPPR3Q6T4P5 718 aa20.56■□□□□ 0.88
BBS2-216ENST00000566495 POTEDQ86YR6 584 aa20.38■□□□□ 0.85
BBS2-216ENST00000566495 PIAS4Q8N2W9 510 aaPredicted RBP20.34■□□□□ 0.85
BBS2-216ENST00000566495 PPP6R1Q9UPN7 881 aa20.12■□□□□ 0.81
BBS2-216ENST00000566495 ADRA2BP18089 450 aa20.06■□□□□ 0.8
BBS2-216ENST00000566495 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
BBS2-216ENST00000566495 DMRT2Q9Y5R5 561 aa18.53■□□□□ 0.56
BBS2-216ENST00000566495 MAPK8IP2Q13387 824 aaPredicted RBP18.47■□□□□ 0.55
BBS2-216ENST00000566495 PPP4R3CPQ6ZMV5 832 aa17.92■□□□□ 0.46
BBS2-216ENST00000566495 CACNB1Q02641 598 aaPredicted RBP17.78■□□□□ 0.44
BBS2-216ENST00000566495 HOXD11P31277 338 aaPredicted RBP17.77■□□□□ 0.44
BBS2-216ENST00000566495 DCAF8L1A6NGE4 600 aa17.76■□□□□ 0.43
BBS2-216ENST00000566495 CNKSR2Q8WXI2 1034 aa17.71■□□□□ 0.43
BBS2-216ENST00000566495 NISCHQ9Y2I1 1504 aa17.71■□□□□ 0.43
BBS2-216ENST00000566495 RNF216Q9NWF9 866 aaPredicted RBP17.61■□□□□ 0.41
BBS2-216ENST00000566495 RNF39Q9H2S5 420 aa17.49■□□□□ 0.39
BBS2-216ENST00000566495 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
BBS2-216ENST00000566495 C1QBPQ07021 282 aaKnown RBP17.31■□□□□ 0.36
BBS2-216ENST00000566495 NCBP3Q53F19 620 aaKnown RBP17.3■□□□□ 0.36
BBS2-216ENST00000566495 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.95■□□□□ 0.34e-6■□□□□ 8.4
BBS2-216ENST00000566495 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
BBS2-216ENST00000566495 ABCC9O60706 1549 aa16.64■□□□□ 0.25
BBS2-216ENST00000566495 U3KPZ7 1027 aaPredicted RBP16.49■□□□□ 0.23
BBS2-216ENST00000566495 CAPN15O75808 1086 aa16.36■□□□□ 0.21
BBS2-216ENST00000566495 KCNA4P22459 653 aa16.31■□□□□ 0.2
BBS2-216ENST00000566495 DSG3P32926 999 aa16.29■□□□□ 0.2
BBS2-216ENST00000566495 SPINK5Q9NQ38 1064 aaPredicted RBP16.27■□□□□ 0.2
BBS2-216ENST00000566495 APLP2Q06481 763 aa16.26■□□□□ 0.19
BBS2-216ENST00000566495 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.15■□□□□ 0.18
BBS2-216ENST00000566495 SLC4A2P04920 1241 aa16.15■□□□□ 0.18
BBS2-216ENST00000566495 HNRNPUL2Q1KMD3 747 aaKnown RBP16.15■□□□□ 0.18
BBS2-216ENST00000566495 ZNF219Q9P2Y4 722 aaPredicted RBP16.08■□□□□ 0.16
BBS2-216ENST00000566495 CCDC180Q9P1Z9 1646 aa16.03■□□□□ 0.16
BBS2-216ENST00000566495 TRHP20396 242 aaPredicted RBP16.01■□□□□ 0.15
BBS2-216ENST00000566495 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
BBS2-216ENST00000566495 POTEHQ6S545 545 aa15.97■□□□□ 0.15
BBS2-216ENST00000566495 ABCB7O75027 752 aa15.87■□□□□ 0.13
BBS2-216ENST00000566495 MYCNP04198 464 aaPredicted RBP15.71■□□□□ 0.11
BBS2-216ENST00000566495 RBM42Q9BTD8 480 aaKnown RBP15.7■□□□□ 0.1
BBS2-216ENST00000566495 RB1CC1Q8TDY2 1594 aa15.57■□□□□ 0.08
BBS2-216ENST00000566495 POLA2Q14181 598 aa15.54■□□□□ 0.08
BBS2-216ENST00000566495 PABPN1Q86U42 306 aaKnown RBP eCLIP15.44■□□□□ 0.06
BBS2-216ENST00000566495 SLC4A1APQ9BWU0 796 aaKnown RBP15.43■□□□□ 0.06
BBS2-216ENST00000566495 FOXD4L1Q9NU39 408 aa15.4■□□□□ 0.06
BBS2-216ENST00000566495 ZBTB12Q9Y330 459 aaPredicted RBP15.36■□□□□ 0.05
BBS2-216ENST00000566495 NACADO15069 1562 aa15.34■□□□□ 0.05
BBS2-216ENST00000566495 CHRDL2Q6WN34 429 aa15.33■□□□□ 0.04
BBS2-216ENST00000566495 DCAF8L2P0C7V8 631 aa15.25■□□□□ 0.03
BBS2-216ENST00000566495 AKT1S1Q96B36 256 aa15.23■□□□□ 0.03
BBS2-216ENST00000566495 ATF5Q9Y2D1 282 aaPredicted RBP15.19■□□□□ 0.02
BBS2-216ENST00000566495 DNAJC5Q9H3Z4 198 aa15.14■□□□□ 0.01
BBS2-216ENST00000566495 BICRAQ9NZM4 1560 aa15.11■□□□□ 0.01
BBS2-216ENST00000566495 CECR2Q9BXF3 1484 aa15.05■□□□□ -0
BBS2-216ENST00000566495 UNC13AQ9UPW8 1703 aa15.05■□□□□ -0
BBS2-216ENST00000566495 ATXN8OSP0DMR3 200 aa15.04■□□□□ -0
BBS2-216ENST00000566495 REM2Q8IYK8 340 aaPredicted RBP15.02■□□□□ -0
BBS2-216ENST00000566495 OSCARQ8IYS5 282 aa15□□□□□ -0.01
BBS2-216ENST00000566495 MYO15BQ96JP2 1530 aa14.97□□□□□ -0.01
BBS2-216ENST00000566495 CC2D2AQ9P2K1 1620 aa14.94□□□□□ -0.02
BBS2-216ENST00000566495 SHROOM4Q9ULL8 1493 aa14.91□□□□□ -0.02
BBS2-216ENST00000566495 ZBTB22O15209 634 aa14.91□□□□□ -0.02
BBS2-216ENST00000566495 SP7Q8TDD2 431 aaPredicted RBP14.88□□□□□ -0.03
BBS2-216ENST00000566495 PIP4P2Q8N4L2 257 aa14.87□□□□□ -0.03
BBS2-216ENST00000566495 FBLN2P98095 1184 aa14.84□□□□□ -0.03
BBS2-216ENST00000566495 PITPNM1O00562 1244 aa14.82□□□□□ -0.04
BBS2-216ENST00000566495 EIF4G1Q04637 1599 aaKnown RBP14.81□□□□□ -0.04
BBS2-216ENST00000566495 SPDYE2BA6NHP3 402 aa14.8□□□□□ -0.04
BBS2-216ENST00000566495 SPDYE6P0CI01 402 aa14.8□□□□□ -0.04
BBS2-216ENST00000566495 SPDYE2Q495Y8 402 aa14.8□□□□□ -0.04
BBS2-216ENST00000566495 FXR2P51116 673 aaKnown RBP eCLIP14.79□□□□□ -0.04
BBS2-216ENST00000566495 HAX1O00165 279 aa14.73□□□□□ -0.05
BBS2-216ENST00000566495 SCRIBQ14160 1630 aa14.63□□□□□ -0.07
BBS2-216ENST00000566495 SPDYE1Q8NFV5 336 aaPredicted RBP14.61□□□□□ -0.07
BBS2-216ENST00000566495 DCAF1Q9Y4B6 1507 aa14.59□□□□□ -0.07
BBS2-216ENST00000566495 ZCCHC6Q5VYS8 1495 aaKnown RBP14.57□□□□□ -0.08
BBS2-216ENST00000566495 CUX2O14529 1486 aa14.56□□□□□ -0.08
BBS2-216ENST00000566495 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
BBS2-216ENST00000566495 CLEC11AQ9Y240 323 aa14.52□□□□□ -0.09
BBS2-216ENST00000566495 MKRN4PQ13434 485 aaPredicted RBP14.51□□□□□ -0.09
BBS2-216ENST00000566495 SSUH2Q9Y2M2 353 aa14.5□□□□□ -0.09
BBS2-216ENST00000566495 PRKAR2AP13861 404 aaKnown RBP14.47□□□□□ -0.09
BBS2-216ENST00000566495 ERCC6Q03468 1493 aa14.42□□□□□ -0.1
BBS2-216ENST00000566495 EVX2Q03828 476 aa14.37□□□□□ -0.11
BBS2-216ENST00000566495 C19orf67A6NJJ6 358 aa14.32□□□□□ -0.12
BBS2-216ENST00000566495 PRR29P0C7W0 189 aa14.3□□□□□ -0.12
BBS2-216ENST00000566495 TRIM41Q8WV44 630 aa14.3□□□□□ -0.12
BBS2-216ENST00000566495 NCAPD3P42695 1498 aa14.21□□□□□ -0.13
BBS2-216ENST00000566495 CHADLQ6NUI6 762 aa14.18□□□□□ -0.14
BBS2-216ENST00000566495 GABBR2O75899 941 aa14.15□□□□□ -0.14
BBS2-216ENST00000566495 NESP48681 1621 aa14.12□□□□□ -0.15
BBS2-216ENST00000566495 CSRNP3Q8WYN3 585 aa14.09□□□□□ -0.15
BBS2-216ENST00000566495 EHMT2Q96KQ7 1210 aa14.09□□□□□ -0.15
BBS2-216ENST00000566495 ATAD2BQ9ULI0 1458 aa14.09□□□□□ -0.15
BBS2-216ENST00000566495 CLCN6P51797 869 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms