RNA–Protein interactions for RNA: ENST00000563360.5

LINC01229-202, Transcript of long intergenic non-protein coding RNA 1229, humanhuman

TSL 4

Gene LINC01229, Length 546 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01229-202ENST00000563360 AEBP2Q6ZN18 517 aaPredicted RBP9.8□□□□□ -0.84
LINC01229-202ENST00000563360 POTEDQ86YR6 584 aa9.47□□□□□ -0.89
LINC01229-202ENST00000563360 CHIC1Q5VXU3 224 aa9.21□□□□□ -0.94
LINC01229-202ENST00000563360 SENP3Q9H4L4 574 aaPredicted RBP8.59□□□□□ -1.03
LINC01229-202ENST00000563360 PHF23Q9BUL5 403 aaPredicted RBP8.3□□□□□ -1.08
LINC01229-202ENST00000563360 FOXD1Q16676 465 aa8.08□□□□□ -1.12
LINC01229-202ENST00000563360 MSH5O43196 834 aa8.01□□□□□ -1.13
LINC01229-202ENST00000563360 CACNB1Q02641 598 aaPredicted RBP7.43□□□□□ -1.22
LINC01229-202ENST00000563360 NISCHQ9Y2I1 1504 aa7.42□□□□□ -1.22
LINC01229-202ENST00000563360 PIAS4Q8N2W9 510 aaPredicted RBP7.28□□□□□ -1.24
LINC01229-202ENST00000563360 POTEHQ6S545 545 aa7.23□□□□□ -1.25
LINC01229-202ENST00000563360 PLPPR3Q6T4P5 718 aa7.16□□□□□ -1.26
LINC01229-202ENST00000563360 PPP6R1Q9UPN7 881 aa6.75□□□□□ -1.33
LINC01229-202ENST00000563360 RNF39Q9H2S5 420 aa6.72□□□□□ -1.33
LINC01229-202ENST00000563360 ADRA2BP18089 450 aa6.65□□□□□ -1.34
LINC01229-202ENST00000563360 DMRT2Q9Y5R5 561 aa6.65□□□□□ -1.34
LINC01229-202ENST00000563360 C1QBPQ07021 282 aaKnown RBP6.6□□□□□ -1.35
LINC01229-202ENST00000563360 CCDC180Q9P1Z9 1646 aa6.5□□□□□ -1.37
LINC01229-202ENST00000563360 MAPK8IP2Q13387 824 aaPredicted RBP6.4□□□□□ -1.38
LINC01229-202ENST00000563360 SCAF1Q9H7N4 1312 aaKnown RBP6.33□□□□□ -1.4
LINC01229-202ENST00000563360 DCAF8L1A6NGE4 600 aa6.31□□□□□ -1.4
LINC01229-202ENST00000563360 SP7Q8TDD2 431 aaPredicted RBP6.31□□□□□ -1.4
LINC01229-202ENST00000563360 PLSCR2Q9NRY7 297 aa6.3□□□□□ -1.4
LINC01229-202ENST00000563360 ZCCHC6Q5VYS8 1495 aaKnown RBP6.28□□□□□ -1.4
LINC01229-202ENST00000563360 NCBP3Q53F19 620 aaKnown RBP6.26□□□□□ -1.41
LINC01229-202ENST00000563360 PPP4R3CPQ6ZMV5 832 aa6.22□□□□□ -1.41
LINC01229-202ENST00000563360 DCAF1Q9Y4B6 1507 aa6.16□□□□□ -1.42
LINC01229-202ENST00000563360 DNAJC5BQ9UF47 199 aa6.14□□□□□ -1.43
LINC01229-202ENST00000563360 CNKSR2Q8WXI2 1034 aa6.13□□□□□ -1.43
LINC01229-202ENST00000563360 KCNA4P22459 653 aa6.06□□□□□ -1.44
LINC01229-202ENST00000563360 SHROOM4Q9ULL8 1493 aa6.05□□□□□ -1.44
LINC01229-202ENST00000563360 HOXD11P31277 338 aaPredicted RBP6.04□□□□□ -1.44
LINC01229-202ENST00000563360 MYO15BQ96JP2 1530 aa6.04□□□□□ -1.44
LINC01229-202ENST00000563360 RNF216Q9NWF9 866 aaPredicted RBP5.99□□□□□ -1.45
LINC01229-202ENST00000563360 CHRDL2Q6WN34 429 aa5.96□□□□□ -1.46
LINC01229-202ENST00000563360 NPM3O75607 178 aaKnown RBP5.95□□□□□ -1.46
LINC01229-202ENST00000563360 NACADO15069 1562 aa5.94□□□□□ -1.46
LINC01229-202ENST00000563360 DSG3P32926 999 aa5.94□□□□□ -1.46
LINC01229-202ENST00000563360 ABCC9O60706 1549 aa5.93□□□□□ -1.46
LINC01229-202ENST00000563360 DCAF8L2P0C7V8 631 aa5.92□□□□□ -1.46
LINC01229-202ENST00000563360 SCRIBQ14160 1630 aa5.92□□□□□ -1.46
LINC01229-202ENST00000563360 LHX8Q68G74 356 aa5.9□□□□□ -1.46
LINC01229-202ENST00000563360 SLC4A1APQ9BWU0 796 aaKnown RBP5.9□□□□□ -1.46
LINC01229-202ENST00000563360 UNC13AQ9UPW8 1703 aa5.89□□□□□ -1.47
LINC01229-202ENST00000563360 RB1CC1Q8TDY2 1594 aa5.86□□□□□ -1.47
LINC01229-202ENST00000563360 SUPT5HO00267 1087 aaKnown RBP5.86□□□□□ -1.47
LINC01229-202ENST00000563360 RSF1Q96T23 1441 aaPredicted RBP5.78□□□□□ -1.48
LINC01229-202ENST00000563360 HAX1O00165 279 aa5.74□□□□□ -1.49
LINC01229-202ENST00000563360 RBM42Q9BTD8 480 aaKnown RBP5.74□□□□□ -1.49
LINC01229-202ENST00000563360 CECR2Q9BXF3 1484 aa5.74□□□□□ -1.49
LINC01229-202ENST00000563360 MROH2BQ7Z745 1585 aa5.74□□□□□ -1.49
LINC01229-202ENST00000563360 WIZO95785 1651 aa5.74□□□□□ -1.49
LINC01229-202ENST00000563360 BAZ1AQ9NRL2 1556 aaPredicted RBP5.73□□□□□ -1.49
LINC01229-202ENST00000563360 BICRAQ9NZM4 1560 aa5.72□□□□□ -1.49
LINC01229-202ENST00000563360 SMARCA4P51532 1647 aa5.71□□□□□ -1.5
LINC01229-202ENST00000563360 FOXD4L1Q9NU39 408 aa5.71□□□□□ -1.5
LINC01229-202ENST00000563360 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP5.7□□□□□ -1.5
LINC01229-202ENST00000563360 HNRNPUL2Q1KMD3 747 aaKnown RBP5.7□□□□□ -1.5
LINC01229-202ENST00000563360 EIF4G1Q04637 1599 aaKnown RBP5.69□□□□□ -1.5
LINC01229-202ENST00000563360 PCDH10Q9P2E7 1040 aa5.69□□□□□ -1.5
LINC01229-202ENST00000563360 CAPN15O75808 1086 aa5.68□□□□□ -1.5
LINC01229-202ENST00000563360 APLP2Q06481 763 aa5.67□□□□□ -1.5
LINC01229-202ENST00000563360 EHMT2Q96KQ7 1210 aa5.67□□□□□ -1.5
LINC01229-202ENST00000563360 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC01229-202ENST00000563360 TOP2AP11388 1531 aaKnown RBP5.66□□□□□ -1.5
LINC01229-202ENST00000563360 PEG3Q9GZU2 1588 aa5.64□□□□□ -1.51
LINC01229-202ENST00000563360 ATXN8OSP0DMR3 200 aa5.64□□□□□ -1.51
LINC01229-202ENST00000563360 MYCNP04198 464 aaPredicted RBP5.63□□□□□ -1.51
LINC01229-202ENST00000563360 CSRNP3Q8WYN3 585 aa5.63□□□□□ -1.51
LINC01229-202ENST00000563360 SPINK5Q9NQ38 1064 aaPredicted RBP5.63□□□□□ -1.51
LINC01229-202ENST00000563360 SMARCA2P51531 1590 aa5.63□□□□□ -1.51
LINC01229-202ENST00000563360 SAMD1Q6SPF0 538 aaPredicted RBP5.61□□□□□ -1.51
LINC01229-202ENST00000563360 POTEMA6NI47 508 aa5.59□□□□□ -1.51
LINC01229-202ENST00000563360 PIP4P2Q8N4L2 257 aa5.59□□□□□ -1.51
LINC01229-202ENST00000563360 EVX2Q03828 476 aa5.58□□□□□ -1.52
LINC01229-202ENST00000563360 CCDC88BA6NC98 1476 aa5.57□□□□□ -1.52
LINC01229-202ENST00000563360 SLC4A2P04920 1241 aa5.55□□□□□ -1.52
LINC01229-202ENST00000563360 ATAD2BQ9ULI0 1458 aa5.53□□□□□ -1.52
LINC01229-202ENST00000563360 POTEGQ6S5H5 508 aa5.53□□□□□ -1.52
LINC01229-202ENST00000563360 PRDM2Q13029 1718 aa5.52□□□□□ -1.53
LINC01229-202ENST00000563360 ABCC8Q09428 1581 aa5.52□□□□□ -1.53
LINC01229-202ENST00000563360 PABPN1Q86U42 306 aaKnown RBP eCLIP5.52□□□□□ -1.53
LINC01229-202ENST00000563360 HMGXB3Q12766 1538 aa5.51□□□□□ -1.53
LINC01229-202ENST00000563360 ZBTB22O15209 634 aa5.5□□□□□ -1.53
LINC01229-202ENST00000563360 TRIM41Q8WV44 630 aa5.5□□□□□ -1.53
LINC01229-202ENST00000563360 LOC105371045A0A1W2PR82 267 aa5.49□□□□□ -1.53
LINC01229-202ENST00000563360 BAZ1BQ9UIG0 1483 aaKnown RBP5.49□□□□□ -1.53
LINC01229-202ENST00000563360 BIVM-ERCC5R4GMW8 1640 aa5.46□□□□□ -1.54
LINC01229-202ENST00000563360 SYNJ1O43426 1573 aa5.46□□□□□ -1.54
LINC01229-202ENST00000563360 NCAPD3P42695 1498 aa5.45□□□□□ -1.54
LINC01229-202ENST00000563360 GABBR2O75899 941 aa5.44□□□□□ -1.54
LINC01229-202ENST00000563360 FXR2P51116 673 aaKnown RBP eCLIP5.44□□□□□ -1.54
LINC01229-202ENST00000563360 U3KPZ7 1027 aaPredicted RBP5.44□□□□□ -1.54
LINC01229-202ENST00000563360 TOP2BQ02880 1626 aa5.43□□□□□ -1.54
LINC01229-202ENST00000563360 WRNQ14191 1432 aaPredicted RBP eCLIP5.42□□□□□ -1.54
LINC01229-202ENST00000563360 EEA1Q15075 1411 aa5.42□□□□□ -1.54
LINC01229-202ENST00000563360 ZNF219Q9P2Y4 722 aaPredicted RBP5.42□□□□□ -1.54
LINC01229-202ENST00000563360 KIF21BO75037 1637 aa5.41□□□□□ -1.54
LINC01229-202ENST00000563360 ABCB7O75027 752 aa5.41□□□□□ -1.54
LINC01229-202ENST00000563360 RUSC2Q8N2Y8 1516 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms