RNA–Protein interactions for RNA: ENST00000560702.1

MEIS2-220, Transcript of Meis homeobox 2, humanhuman

TSL 5

Gene MEIS2, Length 3,230 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS2-220ENST00000560702 NISCHQ9Y2I1 1504 aa12.76□□□□□ -0.37
MEIS2-220ENST00000560702 SHROOM4Q9ULL8 1493 aa11.87□□□□□ -0.51
MEIS2-220ENST00000560702 SUPT5HO00267 1087 aaKnown RBP11.8□□□□□ -0.52
MEIS2-220ENST00000560702 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
MEIS2-220ENST00000560702 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
MEIS2-220ENST00000560702 PPARGC1BQ86YN6 1023 aaKnown RBP11.3□□□□□ -0.6
MEIS2-220ENST00000560702 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
MEIS2-220ENST00000560702 HRCP23327 699 aa11.22□□□□□ -0.61
MEIS2-220ENST00000560702 CHIC1Q5VXU3 224 aa11.16□□□□□ -0.62
MEIS2-220ENST00000560702 LOC105371045A0A1W2PR82 267 aa11.14□□□□□ -0.63
MEIS2-220ENST00000560702 MYO15BQ96JP2 1530 aa11.07□□□□□ -0.64
MEIS2-220ENST00000560702 PELP1Q8IZL8 1130 aaKnown RBP11.05□□□□□ -0.64
MEIS2-220ENST00000560702 FAM9AQ8IZU1 332 aaPredicted RBP11.03□□□□□ -0.64
MEIS2-220ENST00000560702 MYT1Q01538 1121 aa10.93□□□□□ -0.66
MEIS2-220ENST00000560702 CCDC180Q9P1Z9 1646 aa10.91□□□□□ -0.66
MEIS2-220ENST00000560702 TTBK1Q5TCY1 1321 aaPredicted RBP10.86□□□□□ -0.67
MEIS2-220ENST00000560702 TRIM26Q12899 539 aaPredicted RBP10.82□□□□□ -0.68
MEIS2-220ENST00000560702 TRIM41Q8WV44 630 aa10.77□□□□□ -0.69
MEIS2-220ENST00000560702 ZCCHC6Q5VYS8 1495 aaKnown RBP10.75□□□□□ -0.69
MEIS2-220ENST00000560702 SLC24A1O60721 1099 aa10.65□□□□□ -0.71
MEIS2-220ENST00000560702 PRKCSHP14314 528 aaPredicted RBP10.65□□□□□ -0.71
MEIS2-220ENST00000560702 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
MEIS2-220ENST00000560702 AEBP2Q6ZN18 517 aaPredicted RBP10.63□□□□□ -0.71
MEIS2-220ENST00000560702 CCER1Q8TC90 406 aaPredicted RBP10.62□□□□□ -0.71
MEIS2-220ENST00000560702 ZEB1P37275 1124 aaPredicted RBP10.6□□□□□ -0.71
MEIS2-220ENST00000560702 SCAF1Q9H7N4 1312 aaKnown RBP10.6□□□□□ -0.71
MEIS2-220ENST00000560702 DCAF1Q9Y4B6 1507 aa10.59□□□□□ -0.71
MEIS2-220ENST00000560702 YTHDC1Q96MU7 727 aaKnown RBP10.54□□□□□ -0.72
MEIS2-220ENST00000560702 RANGAP1P46060 587 aaPredicted RBP10.46□□□□□ -0.73
MEIS2-220ENST00000560702 GTF3C3Q9Y5Q9 886 aa10.44□□□□□ -0.74
MEIS2-220ENST00000560702 NEUROD1Q13562 356 aa10.44□□□□□ -0.74
MEIS2-220ENST00000560702 DIEXFQ68CQ4 756 aaKnown RBP10.42□□□□□ -0.74
MEIS2-220ENST00000560702 ABCC9O60706 1549 aa10.4□□□□□ -0.74
MEIS2-220ENST00000560702 CENPBP07199 599 aaPredicted RBP10.39□□□□□ -0.75
MEIS2-220ENST00000560702 ACIN1Q9UKV3 1341 aaKnown RBP10.37□□□□□ -0.75
MEIS2-220ENST00000560702 UBTFP17480 764 aaKnown RBP10.37□□□□□ -0.75
MEIS2-220ENST00000560702 SCRIBQ14160 1630 aa10.36□□□□□ -0.75
MEIS2-220ENST00000560702 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
MEIS2-220ENST00000560702 ERICH6Q7L0X2 663 aa10.32□□□□□ -0.76
MEIS2-220ENST00000560702 RSF1Q96T23 1441 aaPredicted RBP10.32□□□□□ -0.76
MEIS2-220ENST00000560702 APLP2Q06481 763 aa10.27□□□□□ -0.77
MEIS2-220ENST00000560702 RB1CC1Q8TDY2 1594 aa10.27□□□□□ -0.77
MEIS2-220ENST00000560702 NACADO15069 1562 aa10.19□□□□□ -0.78
MEIS2-220ENST00000560702 CECR2Q9BXF3 1484 aa10.18□□□□□ -0.78
MEIS2-220ENST00000560702 BCL11AQ9H165 835 aa10.16□□□□□ -0.78
MEIS2-220ENST00000560702 ZNF316A6NFI3 1004 aaPredicted RBP10.16□□□□□ -0.78
MEIS2-220ENST00000560702 MIER1Q8N108 512 aa10.15□□□□□ -0.78
MEIS2-220ENST00000560702 ITGAEP38570 1179 aa10.12□□□□□ -0.79
MEIS2-220ENST00000560702 PABPN1Q86U42 306 aaKnown RBP eCLIP10.07□□□□□ -0.8
MEIS2-220ENST00000560702 MROH2BQ7Z745 1585 aa10.07□□□□□ -0.8
MEIS2-220ENST00000560702 CSRNP3Q8WYN3 585 aa10.06□□□□□ -0.8
MEIS2-220ENST00000560702 ABCC8Q09428 1581 aa10.05□□□□□ -0.8
MEIS2-220ENST00000560702 CEP162Q5TB80 1403 aa10.04□□□□□ -0.8
MEIS2-220ENST00000560702 BCANQ96GW7 911 aa10.04□□□□□ -0.8
MEIS2-220ENST00000560702 WIZO95785 1651 aa10.03□□□□□ -0.8
MEIS2-220ENST00000560702 SOGA1O94964 1423 aa10.03□□□□□ -0.8
MEIS2-220ENST00000560702 UNC13AQ9UPW8 1703 aa10.03□□□□□ -0.8
MEIS2-220ENST00000560702 CCDC88BA6NC98 1476 aa10.02□□□□□ -0.81
MEIS2-220ENST00000560702 DAXXQ9UER7 740 aaPredicted RBP10.01□□□□□ -0.81
MEIS2-220ENST00000560702 PHF23Q9BUL5 403 aaPredicted RBP9.97□□□□□ -0.81
MEIS2-220ENST00000560702 ATP1B4Q9UN42 357 aaPredicted RBP9.97□□□□□ -0.81
MEIS2-220ENST00000560702 RUSC2Q8N2Y8 1516 aa9.96□□□□□ -0.81
MEIS2-220ENST00000560702 BICRAQ9NZM4 1560 aa9.91□□□□□ -0.82
MEIS2-220ENST00000560702 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.83
MEIS2-220ENST00000560702 TNIKQ9UKE5 1360 aa9.88□□□□□ -0.83
MEIS2-220ENST00000560702 KCNH8Q96L42 1107 aa9.86□□□□□ -0.83
MEIS2-220ENST00000560702 CLIP1P30622 1438 aa9.85□□□□□ -0.83
MEIS2-220ENST00000560702 SUPT16HQ9Y5B9 1047 aaKnown RBP9.84□□□□□ -0.83
MEIS2-220ENST00000560702 EIF5BO60841 1220 aaKnown RBP9.84□□□□□ -0.83
MEIS2-220ENST00000560702 DDX10Q13206 875 aaKnown RBP9.82□□□□□ -0.84
MEIS2-220ENST00000560702 CNGB1Q14028 1251 aaPredicted RBP9.81□□□□□ -0.84
MEIS2-220ENST00000560702 FKBP8Q14318 412 aa9.81□□□□□ -0.84
MEIS2-220ENST00000560702 TRIM52Q96A61 297 aa9.81□□□□□ -0.84
MEIS2-220ENST00000560702 GOLGA3Q08378 1498 aa9.81□□□□□ -0.84
MEIS2-220ENST00000560702 FAM50AQ14320 339 aaKnown RBP9.8□□□□□ -0.84
MEIS2-220ENST00000560702 KANK4Q5T7N3 995 aaPredicted RBP9.79□□□□□ -0.84
MEIS2-220ENST00000560702 P3H3Q8IVL6 736 aa9.79□□□□□ -0.84
MEIS2-220ENST00000560702 WRNQ14191 1432 aaPredicted RBP eCLIP9.78□□□□□ -0.84
MEIS2-220ENST00000560702 BAZ1AQ9NRL2 1556 aaPredicted RBP9.78□□□□□ -0.84
MEIS2-220ENST00000560702 NEFLP07196 543 aa9.78□□□□□ -0.84
MEIS2-220ENST00000560702 PLEKHG5O94827 1062 aa9.73□□□□□ -0.85
MEIS2-220ENST00000560702 IRX6P78412 446 aaPredicted RBP9.73□□□□□ -0.85
MEIS2-220ENST00000560702 SIN3AQ96ST3 1273 aa9.73□□□□□ -0.85
MEIS2-220ENST00000560702 TSHZ2Q9NRE2 1034 aa9.73□□□□□ -0.85
MEIS2-220ENST00000560702 RAPGEF2Q9Y4G8 1499 aa9.71□□□□□ -0.85
MEIS2-220ENST00000560702 CEP164Q9UPV0 1460 aa9.7□□□□□ -0.86
MEIS2-220ENST00000560702 VPS8Q8N3P4 1428 aa9.7□□□□□ -0.86
MEIS2-220ENST00000560702 EEA1Q15075 1411 aa9.69□□□□□ -0.86
MEIS2-220ENST00000560702 TOP2AP11388 1531 aaKnown RBP9.69□□□□□ -0.86
MEIS2-220ENST00000560702 SMARCA2P51531 1590 aa9.69□□□□□ -0.86
MEIS2-220ENST00000560702 DHX57Q6P158 1386 aaKnown RBP9.67□□□□□ -0.86
MEIS2-220ENST00000560702 SENP3-EIF4A1A0A087X0R7 540 aa9.66□□□□□ -0.86
MEIS2-220ENST00000560702 ANP32EQ9BTT0 268 aa9.66□□□□□ -0.86
MEIS2-220ENST00000560702 SMARCA4P51532 1647 aa9.65□□□□□ -0.87
MEIS2-220ENST00000560702 ANP32CO43423 234 aa9.64□□□□□ -0.87
MEIS2-220ENST00000560702 PLPPR3Q6T4P5 718 aa9.63□□□□□ -0.87
MEIS2-220ENST00000560702 POLR3GLQ9BT43 218 aa9.63□□□□□ -0.87
MEIS2-220ENST00000560702 ARID3CA6NKF2 412 aa9.6□□□□□ -0.87
MEIS2-220ENST00000560702 HNRNPUQ00839 825 aaKnown RBP eCLIP9.6□□□□□ -0.87
MEIS2-220ENST00000560702 DNAJC5BQ9UF47 199 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms