RNA–Protein interactions for RNA: ENST00000559577.5

LINS1-204, Transcript of lines homolog 1, humanhuman

TSL 5

Gene LINS1, Length 827 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINS1-204ENST00000559577 AEBP2Q6ZN18 517 aaPredicted RBP22.09■■□□□ 1.13
LINS1-204ENST00000559577 CHIC1Q5VXU3 224 aa20.84■□□□□ 0.93
LINS1-204ENST00000559577 SENP3Q9H4L4 574 aaPredicted RBP18.89■□□□□ 0.61
LINS1-204ENST00000559577 PHF23Q9BUL5 403 aaPredicted RBP18.61■□□□□ 0.57
LINS1-204ENST00000559577 FOXD1Q16676 465 aa17.61■□□□□ 0.41
LINS1-204ENST00000559577 PLPPR3Q6T4P5 718 aa16.57■□□□□ 0.24
LINS1-204ENST00000559577 MSH5O43196 834 aa16.56■□□□□ 0.24
LINS1-204ENST00000559577 POTEDQ86YR6 584 aa16.42■□□□□ 0.22
LINS1-204ENST00000559577 PIAS4Q8N2W9 510 aaPredicted RBP16.41■□□□□ 0.22
LINS1-204ENST00000559577 PPP6R1Q9UPN7 881 aa16.34■□□□□ 0.21
LINS1-204ENST00000559577 ADRA2BP18089 450 aa16.27■□□□□ 0.2
LINS1-204ENST00000559577 NISCHQ9Y2I1 1504 aa15.73■□□□□ 0.11
LINS1-204ENST00000559577 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
LINS1-204ENST00000559577 DMRT2Q9Y5R5 561 aa14.96□□□□□ -0.01
LINS1-204ENST00000559577 SCAF1Q9H7N4 1312 aaKnown RBP14.91□□□□□ -0.02
LINS1-204ENST00000559577 PPP4R3CPQ6ZMV5 832 aa14.5□□□□□ -0.09
LINS1-204ENST00000559577 HOXD11P31277 338 aaPredicted RBP14.35□□□□□ -0.11
LINS1-204ENST00000559577 DCAF8L1A6NGE4 600 aa14.3□□□□□ -0.12
LINS1-204ENST00000559577 CACNB1Q02641 598 aaPredicted RBP14.29□□□□□ -0.12
LINS1-204ENST00000559577 CNKSR2Q8WXI2 1034 aa14.28□□□□□ -0.12
LINS1-204ENST00000559577 RNF216Q9NWF9 866 aaPredicted RBP14.19□□□□□ -0.14
LINS1-204ENST00000559577 RNF39Q9H2S5 420 aa14.12□□□□□ -0.15
LINS1-204ENST00000559577 CCDC180Q9P1Z9 1646 aa13.94□□□□□ -0.18
LINS1-204ENST00000559577 DNAJC5BQ9UF47 199 aa13.93□□□□□ -0.18
LINS1-204ENST00000559577 C1QBPQ07021 282 aaKnown RBP13.91□□□□□ -0.18
LINS1-204ENST00000559577 NCBP3Q53F19 620 aaKnown RBP13.9□□□□□ -0.18
LINS1-204ENST00000559577 ABCC9O60706 1549 aa13.73□□□□□ -0.21
LINS1-204ENST00000559577 NPM3O75607 178 aaKnown RBP13.69□□□□□ -0.22
LINS1-204ENST00000559577 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.64□□□□□ -0.23
LINS1-204ENST00000559577 U3KPZ7 1027 aaPredicted RBP13.34□□□□□ -0.27
LINS1-204ENST00000559577 KCNA4P22459 653 aa13.27□□□□□ -0.29
LINS1-204ENST00000559577 DCAF8L2P0C7V8 631 aa13.2□□□□□ -0.3
LINS1-204ENST00000559577 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
LINS1-204ENST00000559577 CAPN15O75808 1086 aa13.17□□□□□ -0.3
LINS1-204ENST00000559577 DSG3P32926 999 aa13.16□□□□□ -0.3
LINS1-204ENST00000559577 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
LINS1-204ENST00000559577 SLC4A2P04920 1241 aa13.12□□□□□ -0.31
LINS1-204ENST00000559577 NACADO15069 1562 aa13.11□□□□□ -0.31
LINS1-204ENST00000559577 ZCCHC6Q5VYS8 1495 aaKnown RBP13.09□□□□□ -0.31
LINS1-204ENST00000559577 MYO15BQ96JP2 1530 aa12.99□□□□□ -0.33
LINS1-204ENST00000559577 APLP2Q06481 763 aa12.97□□□□□ -0.33
LINS1-204ENST00000559577 DCAF1Q9Y4B6 1507 aa12.96□□□□□ -0.33
LINS1-204ENST00000559577 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.93□□□□□ -0.34
LINS1-204ENST00000559577 HNRNPUL2Q1KMD3 747 aaKnown RBP12.93□□□□□ -0.34
LINS1-204ENST00000559577 TRHP20396 242 aaPredicted RBP12.92□□□□□ -0.34
LINS1-204ENST00000559577 UNC13AQ9UPW8 1703 aa12.92□□□□□ -0.34
LINS1-204ENST00000559577 ZNF219Q9P2Y4 722 aaPredicted RBP12.91□□□□□ -0.34
LINS1-204ENST00000559577 PABPN1Q86U42 306 aaKnown RBP eCLIP12.86□□□□□ -0.35
LINS1-204ENST00000559577 POTEHQ6S545 545 aa12.85□□□□□ -0.35
LINS1-204ENST00000559577 SAMD1Q6SPF0 538 aaPredicted RBP12.85□□□□□ -0.35
LINS1-204ENST00000559577 ABCB7O75027 752 aa12.84□□□□□ -0.35
LINS1-204ENST00000559577 BICRAQ9NZM4 1560 aa12.81□□□□□ -0.36
LINS1-204ENST00000559577 SCRIBQ14160 1630 aa12.79□□□□□ -0.36
LINS1-204ENST00000559577 MYCNP04198 464 aaPredicted RBP12.68□□□□□ -0.38
LINS1-204ENST00000559577 RBM42Q9BTD8 480 aaKnown RBP12.57□□□□□ -0.4
LINS1-204ENST00000559577 POLA2Q14181 598 aa12.54□□□□□ -0.4
LINS1-204ENST00000559577 SHROOM4Q9ULL8 1493 aa12.52□□□□□ -0.41
LINS1-204ENST00000559577 SLC4A1APQ9BWU0 796 aaKnown RBP12.5□□□□□ -0.41
LINS1-204ENST00000559577 FOXD4L1Q9NU39 408 aa12.46□□□□□ -0.41
LINS1-204ENST00000559577 EIF4G1Q04637 1599 aaKnown RBP12.43□□□□□ -0.42
LINS1-204ENST00000559577 CC2D2AQ9P2K1 1620 aa12.4□□□□□ -0.42
LINS1-204ENST00000559577 ATF5Q9Y2D1 282 aaPredicted RBP12.37□□□□□ -0.43
LINS1-204ENST00000559577 CHRDL2Q6WN34 429 aa12.35□□□□□ -0.43
LINS1-204ENST00000559577 CECR2Q9BXF3 1484 aa12.33□□□□□ -0.44
LINS1-204ENST00000559577 ZBTB12Q9Y330 459 aaPredicted RBP12.3□□□□□ -0.44
LINS1-204ENST00000559577 AKT1S1Q96B36 256 aa12.25□□□□□ -0.45
LINS1-204ENST00000559577 SMARCA4P51532 1647 aa12.21□□□□□ -0.46
LINS1-204ENST00000559577 ZBTB22O15209 634 aa12.2□□□□□ -0.46
LINS1-204ENST00000559577 MROH2BQ7Z745 1585 aa12.18□□□□□ -0.46
LINS1-204ENST00000559577 BAZ1AQ9NRL2 1556 aaPredicted RBP12.15□□□□□ -0.46
LINS1-204ENST00000559577 ATAD2BQ9ULI0 1458 aa12.14□□□□□ -0.47
LINS1-204ENST00000559577 OSCARQ8IYS5 282 aa12.14□□□□□ -0.47
LINS1-204ENST00000559577 REM2Q8IYK8 340 aaPredicted RBP12.12□□□□□ -0.47
LINS1-204ENST00000559577 NCAPD3P42695 1498 aa12.12□□□□□ -0.47
LINS1-204ENST00000559577 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
LINS1-204ENST00000559577 SMARCA2P51531 1590 aa12.08□□□□□ -0.48
LINS1-204ENST00000559577 PEG3Q9GZU2 1588 aa12.05□□□□□ -0.48
LINS1-204ENST00000559577 WIZO95785 1651 aa12.05□□□□□ -0.48
LINS1-204ENST00000559577 HMGXB3Q12766 1538 aa12.03□□□□□ -0.48
LINS1-204ENST00000559577 PIP4P2Q8N4L2 257 aa12.02□□□□□ -0.49
LINS1-204ENST00000559577 BAZ1BQ9UIG0 1483 aaKnown RBP12.02□□□□□ -0.49
LINS1-204ENST00000559577 RSF1Q96T23 1441 aaPredicted RBP12.01□□□□□ -0.49
LINS1-204ENST00000559577 PITPNM1O00562 1244 aa11.98□□□□□ -0.49
LINS1-204ENST00000559577 SP7Q8TDD2 431 aaPredicted RBP11.96□□□□□ -0.49
LINS1-204ENST00000559577 FXR2P51116 673 aaKnown RBP eCLIP11.93□□□□□ -0.5
LINS1-204ENST00000559577 FBLN2P98095 1184 aa11.92□□□□□ -0.5
LINS1-204ENST00000559577 NESP48681 1621 aa11.91□□□□□ -0.5
LINS1-204ENST00000559577 SPDYE2BA6NHP3 402 aa11.91□□□□□ -0.5
LINS1-204ENST00000559577 SPDYE6P0CI01 402 aa11.91□□□□□ -0.5
LINS1-204ENST00000559577 SPDYE2Q495Y8 402 aa11.91□□□□□ -0.5
LINS1-204ENST00000559577 TOP2AP11388 1531 aaKnown RBP11.86□□□□□ -0.51
LINS1-204ENST00000559577 HAX1O00165 279 aa11.82□□□□□ -0.52
LINS1-204ENST00000559577 MKRN4PQ13434 485 aaPredicted RBP11.81□□□□□ -0.52
LINS1-204ENST00000559577 LAMC3Q9Y6N6 1575 aa11.78□□□□□ -0.52
LINS1-204ENST00000559577 CADPSQ9ULU8 1353 aa11.77□□□□□ -0.53
LINS1-204ENST00000559577 ERCC6Q03468 1493 aa11.76□□□□□ -0.53
LINS1-204ENST00000559577 CCDC88BA6NC98 1476 aa11.76□□□□□ -0.53
LINS1-204ENST00000559577 SUPT5HO00267 1087 aaKnown RBP11.74□□□□□ -0.53
LINS1-204ENST00000559577 SPDYE1Q8NFV5 336 aaPredicted RBP11.74□□□□□ -0.53
LINS1-204ENST00000559577 SSUH2Q9Y2M2 353 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms