RNA–Protein interactions for RNA: ENST00000559376.1

SEC11A-207, Transcript of SEC11 homolog A, signal peptidase complex subunit, humanhuman

Gene SEC11A, Length 2,204 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC11A-207ENST00000559376 NISCHQ9Y2I1 1504 aa20.61■□□□□ 0.89
SEC11A-207ENST00000559376 SHROOM4Q9ULL8 1493 aa17.99■□□□□ 0.47
SEC11A-207ENST00000559376 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
SEC11A-207ENST00000559376 SUPT5HO00267 1087 aaKnown RBP17.79■□□□□ 0.44
SEC11A-207ENST00000559376 CHIC1Q5VXU3 224 aa17.75■□□□□ 0.43
SEC11A-207ENST00000559376 HRCP23327 699 aa17.54■□□□□ 0.4
SEC11A-207ENST00000559376 MYO15BQ96JP2 1530 aa17.5■□□□□ 0.39
SEC11A-207ENST00000559376 ZCCHC6Q5VYS8 1495 aaKnown RBP17.5■□□□□ 0.39
SEC11A-207ENST00000559376 CCDC180Q9P1Z9 1646 aa17.33■□□□□ 0.37
SEC11A-207ENST00000559376 PCGF6Q9BYE7 350 aa17.32■□□□□ 0.36
SEC11A-207ENST00000559376 PPARGC1BQ86YN6 1023 aaKnown RBP17.19■□□□□ 0.34
SEC11A-207ENST00000559376 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
SEC11A-207ENST00000559376 DCAF1Q9Y4B6 1507 aa17.06■□□□□ 0.32
SEC11A-207ENST00000559376 LOC105371045A0A1W2PR82 267 aa16.97■□□□□ 0.31
SEC11A-207ENST00000559376 EHMT2Q96KQ7 1210 aa16.93■□□□□ 0.3
SEC11A-207ENST00000559376 TRIM26Q12899 539 aaPredicted RBP16.84■□□□□ 0.29
SEC11A-207ENST00000559376 ZEB1P37275 1124 aaPredicted RBP16.62■□□□□ 0.25
SEC11A-207ENST00000559376 ABCC9O60706 1549 aa16.61■□□□□ 0.25
SEC11A-207ENST00000559376 AEBP2Q6ZN18 517 aaPredicted RBP16.52■□□□□ 0.24
SEC11A-207ENST00000559376 PELP1Q8IZL8 1130 aaKnown RBP16.5■□□□□ 0.23
SEC11A-207ENST00000559376 TRIM41Q8WV44 630 aa16.5■□□□□ 0.23
SEC11A-207ENST00000559376 RSF1Q96T23 1441 aaPredicted RBP16.46■□□□□ 0.23
SEC11A-207ENST00000559376 FAM9AQ8IZU1 332 aaPredicted RBP16.45■□□□□ 0.22
SEC11A-207ENST00000559376 SCAF1Q9H7N4 1312 aaKnown RBP16.44■□□□□ 0.22
SEC11A-207ENST00000559376 RB1CC1Q8TDY2 1594 aa16.41■□□□□ 0.22
SEC11A-207ENST00000559376 SCRIBQ14160 1630 aa16.41■□□□□ 0.22
SEC11A-207ENST00000559376 PLPPR3Q6T4P5 718 aa16.33■□□□□ 0.2
SEC11A-207ENST00000559376 RTN4Q9NQC3 1192 aaKnown RBP16.25■□□□□ 0.19
SEC11A-207ENST00000559376 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.16■□□□□ 0.18
SEC11A-207ENST00000559376 CCER1Q8TC90 406 aaPredicted RBP16.13■□□□□ 0.17
SEC11A-207ENST00000559376 ACIN1Q9UKV3 1341 aaKnown RBP16.12■□□□□ 0.17
SEC11A-207ENST00000559376 DAXXQ9UER7 740 aaPredicted RBP16.12■□□□□ 0.17
SEC11A-207ENST00000559376 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
SEC11A-207ENST00000559376 NEUROD1Q13562 356 aa16.09■□□□□ 0.17
SEC11A-207ENST00000559376 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
SEC11A-207ENST00000559376 WIZO95785 1651 aa16.05■□□□□ 0.16
SEC11A-207ENST00000559376 NCBP3Q53F19 620 aaKnown RBP16.02■□□□□ 0.15
SEC11A-207ENST00000559376 DIEXFQ68CQ4 756 aaKnown RBP16.01■□□□□ 0.15
SEC11A-207ENST00000559376 AMER1Q5JTC6 1135 aaPredicted RBP15.98■□□□□ 0.15
SEC11A-207ENST00000559376 GTF3C3Q9Y5Q9 886 aa15.98■□□□□ 0.15
SEC11A-207ENST00000559376 CENPBP07199 599 aaPredicted RBP15.98■□□□□ 0.15
SEC11A-207ENST00000559376 PHF23Q9BUL5 403 aaPredicted RBP15.95■□□□□ 0.14
SEC11A-207ENST00000559376 TTBK1Q5TCY1 1321 aaPredicted RBP15.94■□□□□ 0.14
SEC11A-207ENST00000559376 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
SEC11A-207ENST00000559376 BAZ1AQ9NRL2 1556 aaPredicted RBP15.93■□□□□ 0.14
SEC11A-207ENST00000559376 NACADO15069 1562 aa15.92■□□□□ 0.14
SEC11A-207ENST00000559376 WRNQ14191 1432 aaPredicted RBP eCLIP15.86■□□□□ 0.13
SEC11A-207ENST00000559376 ABCC8Q09428 1581 aa15.84■□□□□ 0.13
SEC11A-207ENST00000559376 CEP162Q5TB80 1403 aa15.84■□□□□ 0.13
SEC11A-207ENST00000559376 CCDC88BA6NC98 1476 aa15.81■□□□□ 0.12
SEC11A-207ENST00000559376 CSRNP3Q8WYN3 585 aa15.78■□□□□ 0.12
SEC11A-207ENST00000559376 ZNF316A6NFI3 1004 aaPredicted RBP15.77■□□□□ 0.12
SEC11A-207ENST00000559376 KCNA4P22459 653 aa15.77■□□□□ 0.12
SEC11A-207ENST00000559376 MYT1Q01538 1121 aa15.76■□□□□ 0.11
SEC11A-207ENST00000559376 TNIKQ9UKE5 1360 aa15.74■□□□□ 0.11
SEC11A-207ENST00000559376 SOGA1O94964 1423 aa15.74■□□□□ 0.11
SEC11A-207ENST00000559376 TOP2AP11388 1531 aaKnown RBP15.73■□□□□ 0.11
SEC11A-207ENST00000559376 YTHDC1Q96MU7 727 aaKnown RBP15.73■□□□□ 0.11
SEC11A-207ENST00000559376 DNAJC5BQ9UF47 199 aa15.72■□□□□ 0.11
SEC11A-207ENST00000559376 UBTFP17480 764 aaKnown RBP15.68■□□□□ 0.1
SEC11A-207ENST00000559376 SMARCA2P51531 1590 aa15.68■□□□□ 0.1
SEC11A-207ENST00000559376 RUSC2Q8N2Y8 1516 aa15.65■□□□□ 0.1
SEC11A-207ENST00000559376 SMARCA4P51532 1647 aa15.65■□□□□ 0.1
SEC11A-207ENST00000559376 EEA1Q15075 1411 aa15.64■□□□□ 0.09
SEC11A-207ENST00000559376 MIER1Q8N108 512 aa15.62■□□□□ 0.09
SEC11A-207ENST00000559376 GOLGA3Q08378 1498 aa15.6■□□□□ 0.09
SEC11A-207ENST00000559376 HNRNPUL2Q1KMD3 747 aaKnown RBP15.59■□□□□ 0.09
SEC11A-207ENST00000559376 UNC13AQ9UPW8 1703 aa15.49■□□□□ 0.07
SEC11A-207ENST00000559376 PRKCSHP14314 528 aaPredicted RBP15.47■□□□□ 0.07
SEC11A-207ENST00000559376 CEP164Q9UPV0 1460 aa15.46■□□□□ 0.07
SEC11A-207ENST00000559376 CLIP1P30622 1438 aa15.45■□□□□ 0.06
SEC11A-207ENST00000559376 KIF21BO75037 1637 aa15.45■□□□□ 0.06
SEC11A-207ENST00000559376 VPS8Q8N3P4 1428 aa15.42■□□□□ 0.06
SEC11A-207ENST00000559376 SYNJ1O43426 1573 aa15.41■□□□□ 0.06
SEC11A-207ENST00000559376 APLP2Q06481 763 aa15.41■□□□□ 0.06
SEC11A-207ENST00000559376 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
SEC11A-207ENST00000559376 RANGAP1P46060 587 aaPredicted RBP15.36■□□□□ 0.05
SEC11A-207ENST00000559376 BAZ1BQ9UIG0 1483 aaKnown RBP15.34■□□□□ 0.05
SEC11A-207ENST00000559376 RAPGEF2Q9Y4G8 1499 aa15.33■□□□□ 0.04
SEC11A-207ENST00000559376 ARXQ96QS3 562 aa15.32■□□□□ 0.04
SEC11A-207ENST00000559376 SUPT16HQ9Y5B9 1047 aaKnown RBP15.28■□□□□ 0.04
SEC11A-207ENST00000559376 DHX57Q6P158 1386 aaKnown RBP15.28■□□□□ 0.04
SEC11A-207ENST00000559376 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.03
SEC11A-207ENST00000559376 PEG3Q9GZU2 1588 aa15.26■□□□□ 0.03
SEC11A-207ENST00000559376 BICRAQ9NZM4 1560 aa15.23■□□□□ 0.03
SEC11A-207ENST00000559376 ARAP1Q96P48 1450 aa15.16■□□□□ 0.02
SEC11A-207ENST00000559376 TOP2BQ02880 1626 aa15.15■□□□□ 0.02
SEC11A-207ENST00000559376 KANK4Q5T7N3 995 aaPredicted RBP15.15■□□□□ 0.02
SEC11A-207ENST00000559376 TSHZ2Q9NRE2 1034 aa15.13■□□□□ 0.01
SEC11A-207ENST00000559376 TIMELESSQ9UNS1 1208 aa15.13■□□□□ 0.01
SEC11A-207ENST00000559376 ATAD2BQ9ULI0 1458 aa15.13■□□□□ 0.01
SEC11A-207ENST00000559376 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
SEC11A-207ENST00000559376 RRBP1Q9P2E9 1410 aaKnown RBP15.1■□□□□ 0.01
SEC11A-207ENST00000559376 BIVM-ERCC5R4GMW8 1640 aa15.09■□□□□ 0.01
SEC11A-207ENST00000559376 PRXQ9BXM0 1461 aa15.08■□□□□ 0
SEC11A-207ENST00000559376 SLC4A1APQ9BWU0 796 aaKnown RBP15.07■□□□□ 0
SEC11A-207ENST00000559376 KCNH8Q96L42 1107 aa15.06■□□□□ 0
SEC11A-207ENST00000559376 TAOK2Q9UL54 1235 aa15.06■□□□□ 0
SEC11A-207ENST00000559376 CUX2O14529 1486 aa15.06■□□□□ 0
SEC11A-207ENST00000559376 ITGAEP38570 1179 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 252.1 ms