RNA–Protein interactions for RNA: ENST00000559190.5

HDC-205, Transcript of histidine decarboxylase, humanhuman

TSL 3

Gene HDC, Length 1,017 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDC-205ENST00000559190 CHIC1Q5VXU3 224 aa23.38■■□□□ 1.33
HDC-205ENST00000559190 AEBP2Q6ZN18 517 aaPredicted RBP23.2■■□□□ 1.3
HDC-205ENST00000559190 PHF23Q9BUL5 403 aaPredicted RBP20.67■□□□□ 0.9
HDC-205ENST00000559190 SENP3Q9H4L4 574 aaPredicted RBP19.51■□□□□ 0.71
HDC-205ENST00000559190 PLPPR3Q6T4P5 718 aa19.31■□□□□ 0.68
HDC-205ENST00000559190 ADRA2BP18089 450 aa18.11■□□□□ 0.49
HDC-205ENST00000559190 FOXD1Q16676 465 aa18.04■□□□□ 0.48
HDC-205ENST00000559190 PPP6R1Q9UPN7 881 aa17.99■□□□□ 0.47
HDC-205ENST00000559190 KCNA4P22459 653 aa17.63■□□□□ 0.41
HDC-205ENST00000559190 NISCHQ9Y2I1 1504 aa17.57■□□□□ 0.4
HDC-205ENST00000559190 EHMT2Q96KQ7 1210 aa17.33■□□□□ 0.36
HDC-205ENST00000559190 PIAS4Q8N2W9 510 aaPredicted RBP17.19■□□□□ 0.34
HDC-205ENST00000559190 PPP4R3CPQ6ZMV5 832 aa17.14■□□□□ 0.33
HDC-205ENST00000559190 SLC4A1APQ9BWU0 796 aaKnown RBP16.91■□□□□ 0.3
HDC-205ENST00000559190 NCBP3Q53F19 620 aaKnown RBP16.87■□□□□ 0.29
HDC-205ENST00000559190 CSRNP3Q8WYN3 585 aa16.78■□□□□ 0.28
HDC-205ENST00000559190 NPM3O75607 178 aaKnown RBP16.66■□□□□ 0.26
HDC-205ENST00000559190 CNKSR2Q8WXI2 1034 aa16.47■□□□□ 0.23
HDC-205ENST00000559190 SCAF1Q9H7N4 1312 aaKnown RBP16.43■□□□□ 0.22
HDC-205ENST00000559190 ABCC9O60706 1549 aa16.42■□□□□ 0.22
HDC-205ENST00000559190 MSH5O43196 834 aa16.29■□□□□ 0.2
HDC-205ENST00000559190 ZBTB22O15209 634 aa16.25■□□□□ 0.19
HDC-205ENST00000559190 MAPK8IP2Q13387 824 aaPredicted RBP16.12■□□□□ 0.17
HDC-205ENST00000559190 DNAJC5BQ9UF47 199 aa16.1■□□□□ 0.17
HDC-205ENST00000559190 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
HDC-205ENST00000559190 RNF216Q9NWF9 866 aaPredicted RBP15.96■□□□□ 0.15
HDC-205ENST00000559190 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
HDC-205ENST00000559190 HOXD11P31277 338 aaPredicted RBP15.7■□□□□ 0.1
HDC-205ENST00000559190 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
HDC-205ENST00000559190 CCDC180Q9P1Z9 1646 aa15.5■□□□□ 0.07
HDC-205ENST00000559190 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
HDC-205ENST00000559190 ATXN8OSP0DMR3 200 aa15.34■□□□□ 0.05
HDC-205ENST00000559190 PABPN1Q86U42 306 aaKnown RBP eCLIP15.29■□□□□ 0.04
HDC-205ENST00000559190 DNAJC5Q9H3Z4 198 aa15.18■□□□□ 0.02
HDC-205ENST00000559190 RTN4Q9NQC3 1192 aaKnown RBP15.14■□□□□ 0.01
HDC-205ENST00000559190 FKBP8Q14318 412 aa15.11■□□□□ 0.01
HDC-205ENST00000559190 AMER1Q5JTC6 1135 aaPredicted RBP15.11■□□□□ 0.01
HDC-205ENST00000559190 RB1CC1Q8TDY2 1594 aa15.1■□□□□ 0.01
HDC-205ENST00000559190 DCAF8L2P0C7V8 631 aa15.06■□□□□ 0
HDC-205ENST00000559190 DCAF8L1A6NGE4 600 aa14.98□□□□□ -0.01
HDC-205ENST00000559190 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.94□□□□□ -0.02
HDC-205ENST00000559190 ATF5Q9Y2D1 282 aaPredicted RBP14.94□□□□□ -0.02
HDC-205ENST00000559190 SLC24A1O60721 1099 aa14.92□□□□□ -0.02
HDC-205ENST00000559190 UNC13AQ9UPW8 1703 aa14.87□□□□□ -0.03
HDC-205ENST00000559190 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.84□□□□□ -0.03
HDC-205ENST00000559190 HNRNPUL2Q1KMD3 747 aaKnown RBP14.84□□□□□ -0.03
HDC-205ENST00000559190 SAMD1Q6SPF0 538 aaPredicted RBP14.83□□□□□ -0.04
HDC-205ENST00000559190 U3KPZ7 1027 aaPredicted RBP14.81□□□□□ -0.04
HDC-205ENST00000559190 NACADO15069 1562 aa14.77□□□□□ -0.05
HDC-205ENST00000559190 CECR2Q9BXF3 1484 aa14.76□□□□□ -0.05
HDC-205ENST00000559190 BICRAQ9NZM4 1560 aa14.73□□□□□ -0.05
HDC-205ENST00000559190 CC2D2AQ9P2K1 1620 aa14.69□□□□□ -0.06
HDC-205ENST00000559190 ZCCHC6Q5VYS8 1495 aaKnown RBP14.66□□□□□ -0.06
HDC-205ENST00000559190 ZNF219Q9P2Y4 722 aaPredicted RBP14.57□□□□□ -0.08
HDC-205ENST00000559190 DCAF1Q9Y4B6 1507 aa14.51□□□□□ -0.09
HDC-205ENST00000559190 MYO15BQ96JP2 1530 aa14.5□□□□□ -0.09
HDC-205ENST00000559190 APLP2Q06481 763 aa14.49□□□□□ -0.09
HDC-205ENST00000559190 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
HDC-205ENST00000559190 EIF4G1Q04637 1599 aaKnown RBP14.43□□□□□ -0.1
HDC-205ENST00000559190 SPDYE4A6NLX3 237 aa14.35□□□□□ -0.11
HDC-205ENST00000559190 FBXO3Q9UK99 471 aa14.33□□□□□ -0.12
HDC-205ENST00000559190 MKRN4PQ13434 485 aaPredicted RBP14.32□□□□□ -0.12
HDC-205ENST00000559190 SCRIBQ14160 1630 aa14.26□□□□□ -0.13
HDC-205ENST00000559190 PROM2Q8N271 834 aa14.24□□□□□ -0.13
HDC-205ENST00000559190 CUX2O14529 1486 aa14.21□□□□□ -0.13
HDC-205ENST00000559190 FBLN2P98095 1184 aa14.2□□□□□ -0.14
HDC-205ENST00000559190 ERCC6Q03468 1493 aa14.18□□□□□ -0.14
HDC-205ENST00000559190 TRHP20396 242 aaPredicted RBP14.18□□□□□ -0.14
HDC-205ENST00000559190 SPINK5Q9NQ38 1064 aaPredicted RBP14.18□□□□□ -0.14
HDC-205ENST00000559190 SHROOM4Q9ULL8 1493 aa14.16□□□□□ -0.14
HDC-205ENST00000559190 POLA2Q14181 598 aa14.14□□□□□ -0.15
HDC-205ENST00000559190 VASPP50552 380 aaPredicted RBP14.13□□□□□ -0.15
HDC-205ENST00000559190 CAPN15O75808 1086 aa14.06□□□□□ -0.16
HDC-205ENST00000559190 RNF39Q9H2S5 420 aa14.06□□□□□ -0.16
HDC-205ENST00000559190 IFNLR1Q8IU57 520 aaPredicted RBP14.02□□□□□ -0.17
HDC-205ENST00000559190 PLCB2Q00722 1185 aa13.94□□□□□ -0.18
HDC-205ENST00000559190 C1QBPQ07021 282 aaKnown RBP13.92□□□□□ -0.18
HDC-205ENST00000559190 ZBTB12Q9Y330 459 aaPredicted RBP13.91□□□□□ -0.18
HDC-205ENST00000559190 NESP48681 1621 aa13.9□□□□□ -0.19
HDC-205ENST00000559190 ABCB7O75027 752 aa13.88□□□□□ -0.19
HDC-205ENST00000559190 PKD2Q13563 968 aa13.85□□□□□ -0.19
HDC-205ENST00000559190 SMARCA2P51531 1590 aa13.75□□□□□ -0.21
HDC-205ENST00000559190 HAP1P54257 671 aaPredicted RBP13.74□□□□□ -0.21
HDC-205ENST00000559190 THOC2Q8NI27 1593 aaKnown RBP13.72□□□□□ -0.21
HDC-205ENST00000559190 ZNF692Q9BU19 519 aaPredicted RBP13.71□□□□□ -0.21
HDC-205ENST00000559190 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
HDC-205ENST00000559190 SPOCK2Q92563 424 aa13.69□□□□□ -0.22
HDC-205ENST00000559190 DSG3P32926 999 aa13.66□□□□□ -0.22
HDC-205ENST00000559190 STAG3Q9UJ98 1225 aa13.66□□□□□ -0.22
HDC-205ENST00000559190 NCAPD3P42695 1498 aa13.66□□□□□ -0.22
HDC-205ENST00000559190 KIF21AQ7Z4S6 1674 aa13.63□□□□□ -0.23
HDC-205ENST00000559190 SPDYE2BA6NHP3 402 aa13.63□□□□□ -0.23
HDC-205ENST00000559190 SPDYE6P0CI01 402 aa13.63□□□□□ -0.23
HDC-205ENST00000559190 SPDYE2Q495Y8 402 aa13.63□□□□□ -0.23
HDC-205ENST00000559190 OSCARQ8IYS5 282 aa13.63□□□□□ -0.23
HDC-205ENST00000559190 SSUH2Q9Y2M2 353 aa13.62□□□□□ -0.23
HDC-205ENST00000559190 ECM2O94769 699 aaPredicted RBP13.61□□□□□ -0.23
HDC-205ENST00000559190 BAZ1AQ9NRL2 1556 aaPredicted RBP13.6□□□□□ -0.23
HDC-205ENST00000559190 ATAD2BQ9ULI0 1458 aa13.59□□□□□ -0.23
HDC-205ENST00000559190 SMARCA4P51532 1647 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms