RNA–Protein interactions for RNA: ENST00000558787.1

MARK3-215, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 2

Gene MARK3, Length 758 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-215ENST00000558787 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
MARK3-215ENST00000558787 CHIC1Q5VXU3 224 aa23.26■■□□□ 1.31
MARK3-215ENST00000558787 SENP3Q9H4L4 574 aaPredicted RBP20.8■□□□□ 0.92
MARK3-215ENST00000558787 PHF23Q9BUL5 403 aaPredicted RBP20.54■□□□□ 0.88
MARK3-215ENST00000558787 FOXD1Q16676 465 aa19.33■□□□□ 0.68
MARK3-215ENST00000558787 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
MARK3-215ENST00000558787 PPP6R1Q9UPN7 881 aa18.15■□□□□ 0.5
MARK3-215ENST00000558787 ADRA2BP18089 450 aa18.13■□□□□ 0.49
MARK3-215ENST00000558787 PIAS4Q8N2W9 510 aaPredicted RBP18.13■□□□□ 0.49
MARK3-215ENST00000558787 MSH5O43196 834 aa18.1■□□□□ 0.49
MARK3-215ENST00000558787 POTEDQ86YR6 584 aa17.39■□□□□ 0.37
MARK3-215ENST00000558787 NISCHQ9Y2I1 1504 aa17.34■□□□□ 0.37
MARK3-215ENST00000558787 SCAF1Q9H7N4 1312 aaKnown RBP16.7■□□□□ 0.26
MARK3-215ENST00000558787 MAPK8IP2Q13387 824 aaPredicted RBP16.61■□□□□ 0.25
MARK3-215ENST00000558787 DMRT2Q9Y5R5 561 aa16.49■□□□□ 0.23
MARK3-215ENST00000558787 PPP4R3CPQ6ZMV5 832 aa16.38■□□□□ 0.21
MARK3-215ENST00000558787 CNKSR2Q8WXI2 1034 aa16.06■□□□□ 0.16
MARK3-215ENST00000558787 HOXD11P31277 338 aaPredicted RBP15.93■□□□□ 0.14
MARK3-215ENST00000558787 DCAF8L1A6NGE4 600 aa15.87■□□□□ 0.13
MARK3-215ENST00000558787 RNF216Q9NWF9 866 aaPredicted RBP15.87■□□□□ 0.13
MARK3-215ENST00000558787 NCBP3Q53F19 620 aaKnown RBP15.85■□□□□ 0.13
MARK3-215ENST00000558787 ABCC9O60706 1549 aa15.55■□□□□ 0.08
MARK3-215ENST00000558787 NPM3O75607 178 aaKnown RBP15.53■□□□□ 0.08
MARK3-215ENST00000558787 CACNB1Q02641 598 aaPredicted RBP15.47■□□□□ 0.07
MARK3-215ENST00000558787 CCDC180Q9P1Z9 1646 aa15.46■□□□□ 0.06
MARK3-215ENST00000558787 RNF39Q9H2S5 420 aa15.41■□□□□ 0.06
MARK3-215ENST00000558787 DNAJC5BQ9UF47 199 aa15.38■□□□□ 0.05
MARK3-215ENST00000558787 KCNA4P22459 653 aa15.34■□□□□ 0.05
MARK3-215ENST00000558787 C1QBPQ07021 282 aaKnown RBP15.24■□□□□ 0.03
MARK3-215ENST00000558787 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.24■□□□□ 0.033e-8■■■□□ 14.9
MARK3-215ENST00000558787 U3KPZ7 1027 aaPredicted RBP14.86□□□□□ -0.03
MARK3-215ENST00000558787 SLC4A2P04920 1241 aa14.78□□□□□ -0.04
MARK3-215ENST00000558787 DCAF8L2P0C7V8 631 aa14.76□□□□□ -0.05
MARK3-215ENST00000558787 RB1CC1Q8TDY2 1594 aa14.73□□□□□ -0.05
MARK3-215ENST00000558787 CAPN15O75808 1086 aa14.64□□□□□ -0.07
MARK3-215ENST00000558787 NACADO15069 1562 aa14.63□□□□□ -0.07
MARK3-215ENST00000558787 SPINK5Q9NQ38 1064 aaPredicted RBP14.61□□□□□ -0.07
MARK3-215ENST00000558787 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.58□□□□□ -0.08
MARK3-215ENST00000558787 APLP2Q06481 763 aa14.58□□□□□ -0.08
MARK3-215ENST00000558787 HNRNPUL2Q1KMD3 747 aaKnown RBP14.58□□□□□ -0.08
MARK3-215ENST00000558787 SLC4A1APQ9BWU0 796 aaKnown RBP14.56□□□□□ -0.08
MARK3-215ENST00000558787 PABPN1Q86U42 306 aaKnown RBP eCLIP14.55□□□□□ -0.08
MARK3-215ENST00000558787 DSG3P32926 999 aa14.48□□□□□ -0.09
MARK3-215ENST00000558787 SAMD1Q6SPF0 538 aaPredicted RBP14.48□□□□□ -0.09
MARK3-215ENST00000558787 TRHP20396 242 aaPredicted RBP14.43□□□□□ -0.1
MARK3-215ENST00000558787 ZNF219Q9P2Y4 722 aaPredicted RBP14.41□□□□□ -0.1
MARK3-215ENST00000558787 MYO15BQ96JP2 1530 aa14.41□□□□□ -0.1
MARK3-215ENST00000558787 MYCNP04198 464 aaPredicted RBP14.4□□□□□ -0.1
MARK3-215ENST00000558787 UNC13AQ9UPW8 1703 aa14.4□□□□□ -0.1
MARK3-215ENST00000558787 ZCCHC6Q5VYS8 1495 aaKnown RBP14.36□□□□□ -0.11
MARK3-215ENST00000558787 BICRAQ9NZM4 1560 aa14.34□□□□□ -0.11
MARK3-215ENST00000558787 FOXD4L1Q9NU39 408 aa14.31□□□□□ -0.12
MARK3-215ENST00000558787 ABCB7O75027 752 aa14.28□□□□□ -0.12
MARK3-215ENST00000558787 DCAF1Q9Y4B6 1507 aa14.25□□□□□ -0.13
MARK3-215ENST00000558787 SCRIBQ14160 1630 aa14.19□□□□□ -0.14
MARK3-215ENST00000558787 POLA2Q14181 598 aa14.07□□□□□ -0.16
MARK3-215ENST00000558787 ZBTB22O15209 634 aa14.06□□□□□ -0.16
MARK3-215ENST00000558787 SHROOM4Q9ULL8 1493 aa14.03□□□□□ -0.16
MARK3-215ENST00000558787 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
MARK3-215ENST00000558787 CC2D2AQ9P2K1 1620 aa14□□□□□ -0.17
MARK3-215ENST00000558787 CECR2Q9BXF3 1484 aa13.97□□□□□ -0.17
MARK3-215ENST00000558787 EIF4G1Q04637 1599 aaKnown RBP13.96□□□□□ -0.17
MARK3-215ENST00000558787 ATXN8OSP0DMR3 200 aa13.89□□□□□ -0.19
MARK3-215ENST00000558787 RBM42Q9BTD8 480 aaKnown RBP13.88□□□□□ -0.19
MARK3-215ENST00000558787 ZBTB12Q9Y330 459 aaPredicted RBP13.83□□□□□ -0.2
MARK3-215ENST00000558787 POTEHQ6S545 545 aa13.68□□□□□ -0.22
MARK3-215ENST00000558787 OSCARQ8IYS5 282 aa13.57□□□□□ -0.24
MARK3-215ENST00000558787 CSRNP3Q8WYN3 585 aa13.57□□□□□ -0.24
MARK3-215ENST00000558787 AKT1S1Q96B36 256 aa13.56□□□□□ -0.24
MARK3-215ENST00000558787 FBLN2P98095 1184 aa13.55□□□□□ -0.24
MARK3-215ENST00000558787 NCAPD3P42695 1498 aa13.54□□□□□ -0.24
MARK3-215ENST00000558787 ATAD2BQ9ULI0 1458 aa13.53□□□□□ -0.24
MARK3-215ENST00000558787 EHMT2Q96KQ7 1210 aa13.5□□□□□ -0.25
MARK3-215ENST00000558787 SMARCA4P51532 1647 aa13.5□□□□□ -0.25
MARK3-215ENST00000558787 CHRDL2Q6WN34 429 aa13.48□□□□□ -0.25
MARK3-215ENST00000558787 SMARCA2P51531 1590 aa13.45□□□□□ -0.26
MARK3-215ENST00000558787 BAZ1AQ9NRL2 1556 aaPredicted RBP13.42□□□□□ -0.26
MARK3-215ENST00000558787 REM2Q8IYK8 340 aaPredicted RBP13.42□□□□□ -0.26
MARK3-215ENST00000558787 HMGXB3Q12766 1538 aa13.4□□□□□ -0.26
MARK3-215ENST00000558787 MROH2BQ7Z745 1585 aa13.4□□□□□ -0.26
MARK3-215ENST00000558787 SPDYE2BA6NHP3 402 aa13.39□□□□□ -0.27
MARK3-215ENST00000558787 SPDYE6P0CI01 402 aa13.39□□□□□ -0.27
MARK3-215ENST00000558787 SPDYE2Q495Y8 402 aa13.39□□□□□ -0.27
MARK3-215ENST00000558787 BAZ1BQ9UIG0 1483 aaKnown RBP13.39□□□□□ -0.27
MARK3-215ENST00000558787 ERCC6Q03468 1493 aa13.38□□□□□ -0.27
MARK3-215ENST00000558787 NESP48681 1621 aa13.38□□□□□ -0.27
MARK3-215ENST00000558787 MKRN4PQ13434 485 aaPredicted RBP13.36□□□□□ -0.27
MARK3-215ENST00000558787 PEG3Q9GZU2 1588 aa13.33□□□□□ -0.28
MARK3-215ENST00000558787 DNAJC5Q9H3Z4 198 aa13.31□□□□□ -0.28
MARK3-215ENST00000558787 CUX2O14529 1486 aa13.28□□□□□ -0.28
MARK3-215ENST00000558787 ZNF692Q9BU19 519 aaPredicted RBP13.26□□□□□ -0.29
MARK3-215ENST00000558787 PITPNM1O00562 1244 aa13.25□□□□□ -0.29
MARK3-215ENST00000558787 WIZO95785 1651 aa13.23□□□□□ -0.29
MARK3-215ENST00000558787 LAMC3Q9Y6N6 1575 aa13.19□□□□□ -0.3
MARK3-215ENST00000558787 PIP4P2Q8N4L2 257 aa13.17□□□□□ -0.3
MARK3-215ENST00000558787 SSUH2Q9Y2M2 353 aa13.17□□□□□ -0.3
MARK3-215ENST00000558787 CADPSQ9ULU8 1353 aa13.16□□□□□ -0.3
MARK3-215ENST00000558787 THOC2Q8NI27 1593 aaKnown RBP13.15□□□□□ -0.3
MARK3-215ENST00000558787 KIF21AQ7Z4S6 1674 aa13.15□□□□□ -0.31
MARK3-215ENST00000558787 RSF1Q96T23 1441 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms