RNA–Protein interactions for RNA: ENST00000558048.5

IGDCC4-202, Transcript of immunoglobulin superfamily DCC subclass member 4, humanhuman

TSL 2

Gene IGDCC4, Length 3,407 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGDCC4-202ENST00000558048 NISCHQ9Y2I1 1504 aa23.02■■□□□ 1.28
IGDCC4-202ENST00000558048 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
IGDCC4-202ENST00000558048 SHROOM4Q9ULL8 1493 aa20.75■□□□□ 0.91
IGDCC4-202ENST00000558048 SUPT5HO00267 1087 aaKnown RBP20.68■□□□□ 0.9
IGDCC4-202ENST00000558048 HRCP23327 699 aa20.66■□□□□ 0.9
IGDCC4-202ENST00000558048 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
IGDCC4-202ENST00000558048 PPARGC1BQ86YN6 1023 aaKnown RBP20.29■□□□□ 0.84
IGDCC4-202ENST00000558048 CHIC1Q5VXU3 224 aa20.11■□□□□ 0.81
IGDCC4-202ENST00000558048 PELP1Q8IZL8 1130 aaKnown RBP20.06■□□□□ 0.8
IGDCC4-202ENST00000558048 MYO15BQ96JP2 1530 aa20.06■□□□□ 0.8
IGDCC4-202ENST00000558048 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
IGDCC4-202ENST00000558048 TRIM26Q12899 539 aaPredicted RBP19.69■□□□□ 0.74
IGDCC4-202ENST00000558048 DCAF1Q9Y4B6 1507 aa19.67■□□□□ 0.74
IGDCC4-202ENST00000558048 ZEB1P37275 1124 aaPredicted RBP19.57■□□□□ 0.72
IGDCC4-202ENST00000558048 ZCCHC6Q5VYS8 1495 aaKnown RBP19.54■□□□□ 0.72
IGDCC4-202ENST00000558048 SCAF1Q9H7N4 1312 aaKnown RBP19.49■□□□□ 0.71
IGDCC4-202ENST00000558048 MYT1Q01538 1121 aa19.39■□□□□ 0.7
IGDCC4-202ENST00000558048 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
IGDCC4-202ENST00000558048 EHMT2Q96KQ7 1210 aa19.32■□□□□ 0.68
IGDCC4-202ENST00000558048 FAM9AQ8IZU1 332 aaPredicted RBP19.18■□□□□ 0.66
IGDCC4-202ENST00000558048 ACIN1Q9UKV3 1341 aaKnown RBP19.1■□□□□ 0.65
IGDCC4-202ENST00000558048 TRIM41Q8WV44 630 aa19.09■□□□□ 0.65
IGDCC4-202ENST00000558048 CENPBP07199 599 aaPredicted RBP19.05■□□□□ 0.64
IGDCC4-202ENST00000558048 NEUROD1Q13562 356 aa19.04■□□□□ 0.64
IGDCC4-202ENST00000558048 GTF3C3Q9Y5Q9 886 aa19.01■□□□□ 0.63
IGDCC4-202ENST00000558048 CCER1Q8TC90 406 aaPredicted RBP18.99■□□□□ 0.63
IGDCC4-202ENST00000558048 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.93■□□□□ 0.62
IGDCC4-202ENST00000558048 ABCC9O60706 1549 aa18.92■□□□□ 0.62
IGDCC4-202ENST00000558048 DIEXFQ68CQ4 756 aaKnown RBP18.88■□□□□ 0.61
IGDCC4-202ENST00000558048 YTHDC1Q96MU7 727 aaKnown RBP18.72■□□□□ 0.59
IGDCC4-202ENST00000558048 TTBK1Q5TCY1 1321 aaPredicted RBP18.71■□□□□ 0.59
IGDCC4-202ENST00000558048 SCRIBQ14160 1630 aa18.67■□□□□ 0.58
IGDCC4-202ENST00000558048 RSF1Q96T23 1441 aaPredicted RBP18.57■□□□□ 0.56
IGDCC4-202ENST00000558048 ZNF316A6NFI3 1004 aaPredicted RBP18.5■□□□□ 0.55
IGDCC4-202ENST00000558048 PABPN1Q86U42 306 aaKnown RBP eCLIP18.48■□□□□ 0.55
IGDCC4-202ENST00000558048 RB1CC1Q8TDY2 1594 aa18.46■□□□□ 0.54
IGDCC4-202ENST00000558048 MIER1Q8N108 512 aa18.35■□□□□ 0.53
IGDCC4-202ENST00000558048 CECR2Q9BXF3 1484 aa18.3■□□□□ 0.52
IGDCC4-202ENST00000558048 RANGAP1P46060 587 aaPredicted RBP18.27■□□□□ 0.52
IGDCC4-202ENST00000558048 HNRNPUL2Q1KMD3 747 aaKnown RBP18.21■□□□□ 0.51
IGDCC4-202ENST00000558048 UBTFP17480 764 aaKnown RBP18.2■□□□□ 0.5
IGDCC4-202ENST00000558048 CEP162Q5TB80 1403 aa18.13■□□□□ 0.49
IGDCC4-202ENST00000558048 WRNQ14191 1432 aaPredicted RBP eCLIP18.09■□□□□ 0.49
IGDCC4-202ENST00000558048 MROH2BQ7Z745 1585 aa18.06■□□□□ 0.48
IGDCC4-202ENST00000558048 SUPT16HQ9Y5B9 1047 aaKnown RBP18.03■□□□□ 0.48
IGDCC4-202ENST00000558048 CLSPNQ9HAW4 1339 aa18.01■□□□□ 0.47
IGDCC4-202ENST00000558048 APLP2Q06481 763 aa18.01■□□□□ 0.47
IGDCC4-202ENST00000558048 BCL11AQ9H165 835 aa18■□□□□ 0.47
IGDCC4-202ENST00000558048 ANP32EQ9BTT0 268 aa17.98■□□□□ 0.47
IGDCC4-202ENST00000558048 TNIKQ9UKE5 1360 aa17.98■□□□□ 0.47
IGDCC4-202ENST00000558048 CSRNP3Q8WYN3 585 aa17.97■□□□□ 0.47
IGDCC4-202ENST00000558048 NACADO15069 1562 aa17.97■□□□□ 0.47
IGDCC4-202ENST00000558048 CCDC88BA6NC98 1476 aa17.92■□□□□ 0.46
IGDCC4-202ENST00000558048 TSHZ2Q9NRE2 1034 aa17.92■□□□□ 0.46
IGDCC4-202ENST00000558048 WIZO95785 1651 aa17.91■□□□□ 0.46
IGDCC4-202ENST00000558048 SOGA1O94964 1423 aa17.9■□□□□ 0.46
IGDCC4-202ENST00000558048 ABCC8Q09428 1581 aa17.89■□□□□ 0.45
IGDCC4-202ENST00000558048 BCANQ96GW7 911 aa17.86■□□□□ 0.45
IGDCC4-202ENST00000558048 GOLGA3Q08378 1498 aa17.79■□□□□ 0.44
IGDCC4-202ENST00000558048 EEA1Q15075 1411 aa17.78■□□□□ 0.44
IGDCC4-202ENST00000558048 BAZ1AQ9NRL2 1556 aaPredicted RBP17.74■□□□□ 0.43
IGDCC4-202ENST00000558048 RUSC2Q8N2Y8 1516 aa17.74■□□□□ 0.43
IGDCC4-202ENST00000558048 NEFLP07196 543 aa17.71■□□□□ 0.43
IGDCC4-202ENST00000558048 CLIP1P30622 1438 aa17.71■□□□□ 0.43
IGDCC4-202ENST00000558048 FKBP8Q14318 412 aa17.7■□□□□ 0.42
IGDCC4-202ENST00000558048 EIF4G1Q04637 1599 aaKnown RBP17.68■□□□□ 0.42
IGDCC4-202ENST00000558048 VPS8Q8N3P4 1428 aa17.61■□□□□ 0.41
IGDCC4-202ENST00000558048 KCNH8Q96L42 1107 aa17.6■□□□□ 0.41
IGDCC4-202ENST00000558048 DHX57Q6P158 1386 aaKnown RBP17.59■□□□□ 0.41
IGDCC4-202ENST00000558048 CEP164Q9UPV0 1460 aa17.59■□□□□ 0.41
IGDCC4-202ENST00000558048 ITGAEP38570 1179 aa17.58■□□□□ 0.4
IGDCC4-202ENST00000558048 TOP2AP11388 1531 aaKnown RBP17.57■□□□□ 0.4
IGDCC4-202ENST00000558048 ERICH6Q7L0X2 663 aa17.56■□□□□ 0.4
IGDCC4-202ENST00000558048 RBM19Q9Y4C8 960 aaKnown RBP17.56■□□□□ 0.4
IGDCC4-202ENST00000558048 ATP1B4Q9UN42 357 aaPredicted RBP17.53■□□□□ 0.4
IGDCC4-202ENST00000558048 DDX10Q13206 875 aaKnown RBP17.5■□□□□ 0.39
IGDCC4-202ENST00000558048 SMARCA2P51531 1590 aa17.5■□□□□ 0.39
IGDCC4-202ENST00000558048 TRIM52Q96A61 297 aa17.46■□□□□ 0.39
IGDCC4-202ENST00000558048 SMARCA4P51532 1647 aa17.45■□□□□ 0.38
IGDCC4-202ENST00000558048 RAPGEF2Q9Y4G8 1499 aa17.39■□□□□ 0.37
IGDCC4-202ENST00000558048 KANK4Q5T7N3 995 aaPredicted RBP17.39■□□□□ 0.37
IGDCC4-202ENST00000558048 KIF21BO75037 1637 aa17.37■□□□□ 0.37
IGDCC4-202ENST00000558048 ANP32CO43423 234 aa17.36■□□□□ 0.37
IGDCC4-202ENST00000558048 BAZ1BQ9UIG0 1483 aaKnown RBP17.35■□□□□ 0.37
IGDCC4-202ENST00000558048 PRKCSHP14314 528 aaPredicted RBP17.34■□□□□ 0.37
IGDCC4-202ENST00000558048 CDK11AQ9UQ88 783 aaPredicted RBP17.34■□□□□ 0.37
IGDCC4-202ENST00000558048 HIRIP3Q9BW71 556 aaPredicted RBP17.33■□□□□ 0.36
IGDCC4-202ENST00000558048 P3H3Q8IVL6 736 aa17.31■□□□□ 0.36
IGDCC4-202ENST00000558048 CCNB3Q8WWL7 1395 aa17.28■□□□□ 0.36
IGDCC4-202ENST00000558048 MSH5O43196 834 aa17.28■□□□□ 0.36
IGDCC4-202ENST00000558048 IRX6P78412 446 aaPredicted RBP17.27■□□□□ 0.36
IGDCC4-202ENST00000558048 SIN3AQ96ST3 1273 aa17.25■□□□□ 0.35
IGDCC4-202ENST00000558048 SYNJ1O43426 1573 aa17.25■□□□□ 0.35
IGDCC4-202ENST00000558048 ATAD2BQ9ULI0 1458 aa17.24■□□□□ 0.35
IGDCC4-202ENST00000558048 RAB3GAP2Q9H2M9 1393 aa17.24■□□□□ 0.35
IGDCC4-202ENST00000558048 UNC13AQ9UPW8 1703 aa17.22■□□□□ 0.35
IGDCC4-202ENST00000558048 CCER2I3L3R5 266 aa17.22■□□□□ 0.35
IGDCC4-202ENST00000558048 BICRAQ9NZM4 1560 aa17.21■□□□□ 0.35
IGDCC4-202ENST00000558048 FAM50AQ14320 339 aaKnown RBP17.21■□□□□ 0.34
IGDCC4-202ENST00000558048 HNRNPUQ00839 825 aaKnown RBP eCLIP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms