RNA–Protein interactions for RNA: ENST00000556251.1

RAD51B-223, Transcript of RAD51 paralog B, humanhuman

TSL 4

Gene RAD51B, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD51B-223ENST00000556251 AEBP2Q6ZN18 517 aaPredicted RBP16.38■□□□□ 0.21
RAD51B-223ENST00000556251 CHIC1Q5VXU3 224 aa16.35■□□□□ 0.21
RAD51B-223ENST00000556251 PHF23Q9BUL5 403 aaPredicted RBP14.43□□□□□ -0.1
RAD51B-223ENST00000556251 SENP3Q9H4L4 574 aaPredicted RBP13.83□□□□□ -0.2
RAD51B-223ENST00000556251 PLPPR3Q6T4P5 718 aa13.43□□□□□ -0.26
RAD51B-223ENST00000556251 NISCHQ9Y2I1 1504 aa13.05□□□□□ -0.32
RAD51B-223ENST00000556251 FOXD1Q16676 465 aa12.8□□□□□ -0.36
RAD51B-223ENST00000556251 ADRA2BP18089 450 aa12.61□□□□□ -0.39
RAD51B-223ENST00000556251 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
RAD51B-223ENST00000556251 PIAS4Q8N2W9 510 aaPredicted RBP12.15□□□□□ -0.46
RAD51B-223ENST00000556251 KCNA4P22459 653 aa12.03□□□□□ -0.48
RAD51B-223ENST00000556251 PPP4R3CPQ6ZMV5 832 aa11.89□□□□□ -0.51
RAD51B-223ENST00000556251 NCBP3Q53F19 620 aaKnown RBP11.67□□□□□ -0.54
RAD51B-223ENST00000556251 MSH5O43196 834 aa11.65□□□□□ -0.54
RAD51B-223ENST00000556251 EHMT2Q96KQ7 1210 aa11.59□□□□□ -0.55
RAD51B-223ENST00000556251 ABCC9O60706 1549 aa11.59□□□□□ -0.55
RAD51B-223ENST00000556251 CCDC180Q9P1Z9 1646 aa11.56□□□□□ -0.56
RAD51B-223ENST00000556251 SCAF1Q9H7N4 1312 aaKnown RBP11.53□□□□□ -0.56
RAD51B-223ENST00000556251 NPM3O75607 178 aaKnown RBP11.51□□□□□ -0.57
RAD51B-223ENST00000556251 SLC4A1APQ9BWU0 796 aaKnown RBP11.51□□□□□ -0.57
RAD51B-223ENST00000556251 CNKSR2Q8WXI2 1034 aa11.47□□□□□ -0.57
RAD51B-223ENST00000556251 MAPK8IP2Q13387 824 aaPredicted RBP11.33□□□□□ -0.6
RAD51B-223ENST00000556251 CSRNP3Q8WYN3 585 aa11.31□□□□□ -0.6
RAD51B-223ENST00000556251 DCAF8L2P0C7V8 631 aa11.2□□□□□ -0.62
RAD51B-223ENST00000556251 RNF216Q9NWF9 866 aaPredicted RBP11.16□□□□□ -0.62
RAD51B-223ENST00000556251 DNAJC5BQ9UF47 199 aa11.12□□□□□ -0.63
RAD51B-223ENST00000556251 DMRT2Q9Y5R5 561 aa11.11□□□□□ -0.63
RAD51B-223ENST00000556251 ZBTB22O15209 634 aa11.07□□□□□ -0.64
RAD51B-223ENST00000556251 HOXD11P31277 338 aaPredicted RBP11.02□□□□□ -0.65
RAD51B-223ENST00000556251 RB1CC1Q8TDY2 1594 aa10.97□□□□□ -0.65
RAD51B-223ENST00000556251 FOXD4L1Q9NU39 408 aa10.96□□□□□ -0.65
RAD51B-223ENST00000556251 NACADO15069 1562 aa10.9□□□□□ -0.66
RAD51B-223ENST00000556251 PABPN1Q86U42 306 aaKnown RBP eCLIP10.86□□□□□ -0.67
RAD51B-223ENST00000556251 ZCCHC6Q5VYS8 1495 aaKnown RBP10.85□□□□□ -0.67
RAD51B-223ENST00000556251 SLC4A2P04920 1241 aa10.79□□□□□ -0.68
RAD51B-223ENST00000556251 UNC13AQ9UPW8 1703 aa10.73□□□□□ -0.69
RAD51B-223ENST00000556251 SCRIBQ14160 1630 aa10.72□□□□□ -0.69
RAD51B-223ENST00000556251 MYO15BQ96JP2 1530 aa10.71□□□□□ -0.69
RAD51B-223ENST00000556251 DCAF1Q9Y4B6 1507 aa10.68□□□□□ -0.7
RAD51B-223ENST00000556251 BICRAQ9NZM4 1560 aa10.65□□□□□ -0.71
RAD51B-223ENST00000556251 MYCNP04198 464 aaPredicted RBP10.63□□□□□ -0.71
RAD51B-223ENST00000556251 DCAF8L1A6NGE4 600 aa10.59□□□□□ -0.71
RAD51B-223ENST00000556251 ATXN8OSP0DMR3 200 aa10.54□□□□□ -0.72
RAD51B-223ENST00000556251 SHROOM4Q9ULL8 1493 aa10.53□□□□□ -0.72
RAD51B-223ENST00000556251 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.49□□□□□ -0.73
RAD51B-223ENST00000556251 CC2D2AQ9P2K1 1620 aa10.4□□□□□ -0.75
RAD51B-223ENST00000556251 EIF4G1Q04637 1599 aaKnown RBP10.39□□□□□ -0.75
RAD51B-223ENST00000556251 U3KPZ7 1027 aaPredicted RBP10.37□□□□□ -0.75
RAD51B-223ENST00000556251 CECR2Q9BXF3 1484 aa10.36□□□□□ -0.75
RAD51B-223ENST00000556251 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.35□□□□□ -0.75
RAD51B-223ENST00000556251 HNRNPUL2Q1KMD3 747 aaKnown RBP10.35□□□□□ -0.75
RAD51B-223ENST00000556251 SAMD1Q6SPF0 538 aaPredicted RBP10.34□□□□□ -0.75
RAD51B-223ENST00000556251 ATF5Q9Y2D1 282 aaPredicted RBP10.32□□□□□ -0.76
RAD51B-223ENST00000556251 FKBP8Q14318 412 aa10.19□□□□□ -0.78
RAD51B-223ENST00000556251 APLP2Q06481 763 aa10.16□□□□□ -0.78
RAD51B-223ENST00000556251 SMARCA4P51532 1647 aa10.15□□□□□ -0.78
RAD51B-223ENST00000556251 ATAD2BQ9ULI0 1458 aa10.12□□□□□ -0.79
RAD51B-223ENST00000556251 MROH2BQ7Z745 1585 aa10.11□□□□□ -0.79
RAD51B-223ENST00000556251 BAZ1AQ9NRL2 1556 aaPredicted RBP10.11□□□□□ -0.79
RAD51B-223ENST00000556251 ZNF219Q9P2Y4 722 aaPredicted RBP10.11□□□□□ -0.79
RAD51B-223ENST00000556251 SMARCA2P51531 1590 aa10.07□□□□□ -0.8
RAD51B-223ENST00000556251 NCAPD3P42695 1498 aa10.06□□□□□ -0.8
RAD51B-223ENST00000556251 BAZ1BQ9UIG0 1483 aaKnown RBP10.06□□□□□ -0.8
RAD51B-223ENST00000556251 RNF39Q9H2S5 420 aa10.03□□□□□ -0.8
RAD51B-223ENST00000556251 WIZO95785 1651 aa10.02□□□□□ -0.8
RAD51B-223ENST00000556251 HMGXB3Q12766 1538 aa10.01□□□□□ -0.81
RAD51B-223ENST00000556251 NESP48681 1621 aa9.99□□□□□ -0.81
RAD51B-223ENST00000556251 POTEDQ86YR6 584 aa9.98□□□□□ -0.81
RAD51B-223ENST00000556251 ERCC6Q03468 1493 aa9.98□□□□□ -0.81
RAD51B-223ENST00000556251 SPINK5Q9NQ38 1064 aaPredicted RBP9.97□□□□□ -0.81
RAD51B-223ENST00000556251 TRHP20396 242 aaPredicted RBP9.96□□□□□ -0.82
RAD51B-223ENST00000556251 PEG3Q9GZU2 1588 aa9.96□□□□□ -0.82
RAD51B-223ENST00000556251 RSF1Q96T23 1441 aaPredicted RBP9.95□□□□□ -0.82
RAD51B-223ENST00000556251 AMER1Q5JTC6 1135 aaPredicted RBP9.93□□□□□ -0.82
RAD51B-223ENST00000556251 C1QBPQ07021 282 aaKnown RBP9.92□□□□□ -0.82
RAD51B-223ENST00000556251 RTN4Q9NQC3 1192 aaKnown RBP9.92□□□□□ -0.82
RAD51B-223ENST00000556251 CAPN15O75808 1086 aa9.91□□□□□ -0.82
RAD51B-223ENST00000556251 MKRN4PQ13434 485 aaPredicted RBP9.89□□□□□ -0.83
RAD51B-223ENST00000556251 POLA2Q14181 598 aa9.88□□□□□ -0.83
RAD51B-223ENST00000556251 SUPT5HO00267 1087 aaKnown RBP9.85□□□□□ -0.83
RAD51B-223ENST00000556251 FBLN2P98095 1184 aa9.85□□□□□ -0.83
RAD51B-223ENST00000556251 TOP2AP11388 1531 aaKnown RBP9.85□□□□□ -0.83
RAD51B-223ENST00000556251 SPDYE4A6NLX3 237 aa9.84□□□□□ -0.83
RAD51B-223ENST00000556251 CADPSQ9ULU8 1353 aa9.83□□□□□ -0.84
RAD51B-223ENST00000556251 LAMC3Q9Y6N6 1575 aa9.82□□□□□ -0.84
RAD51B-223ENST00000556251 KIF21AQ7Z4S6 1674 aa9.82□□□□□ -0.84
RAD51B-223ENST00000556251 PDS5BQ9NTI5 1447 aa9.8□□□□□ -0.84
RAD51B-223ENST00000556251 CCDC88BA6NC98 1476 aa9.78□□□□□ -0.84
RAD51B-223ENST00000556251 THOC2Q8NI27 1593 aaKnown RBP9.76□□□□□ -0.85
RAD51B-223ENST00000556251 ABCB7O75027 752 aa9.76□□□□□ -0.85
RAD51B-223ENST00000556251 CUX2O14529 1486 aa9.76□□□□□ -0.85
RAD51B-223ENST00000556251 FANCD2Q9BXW9 1451 aa9.74□□□□□ -0.85
RAD51B-223ENST00000556251 CEP164Q9UPV0 1460 aa9.73□□□□□ -0.85
RAD51B-223ENST00000556251 PROM2Q8N271 834 aa9.73□□□□□ -0.85
RAD51B-223ENST00000556251 FBXO3Q9UK99 471 aa9.73□□□□□ -0.85
RAD51B-223ENST00000556251 ZBTB12Q9Y330 459 aaPredicted RBP9.73□□□□□ -0.85
RAD51B-223ENST00000556251 CFTRP13569 1480 aa9.72□□□□□ -0.85
RAD51B-223ENST00000556251 MRC2Q9UBG0 1479 aa9.72□□□□□ -0.85
RAD51B-223ENST00000556251 DSG3P32926 999 aa9.67□□□□□ -0.86
RAD51B-223ENST00000556251 WDR62O43379 1518 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms