RNA–Protein interactions for RNA: ENST00000554125.5

GPATCH2L-204, Transcript of G-patch domain containing 2 like, humanhuman

TSL 1 (best)

Gene GPATCH2L, Length 6,248 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH2L-204ENST00000554125 NISCHQ9Y2I1 1504 aa21.91■■□□□ 1.1
GPATCH2L-204ENST00000554125 DCAF8L2P0C7V8 631 aa21.48■■□□□ 1.03
GPATCH2L-204ENST00000554125 SHROOM4Q9ULL8 1493 aa19.81■□□□□ 0.76
GPATCH2L-204ENST00000554125 SUPT5HO00267 1087 aaKnown RBP19.74■□□□□ 0.75
GPATCH2L-204ENST00000554125 ABCC9O60706 1549 aa19.13■□□□□ 0.65
GPATCH2L-204ENST00000554125 FAM9AQ8IZU1 332 aaPredicted RBP18.95■□□□□ 0.62
GPATCH2L-204ENST00000554125 EHMT2Q96KQ7 1210 aa18.7■□□□□ 0.58
GPATCH2L-204ENST00000554125 PABPN1Q86U42 306 aaKnown RBP eCLIP18.64■□□□□ 0.58
GPATCH2L-204ENST00000554125 APLP2Q06481 763 aa18.64■□□□□ 0.57
GPATCH2L-204ENST00000554125 CCDC180Q9P1Z9 1646 aa18.52■□□□□ 0.56
GPATCH2L-204ENST00000554125 TRIM41Q8WV44 630 aa18.51■□□□□ 0.55
GPATCH2L-204ENST00000554125 RANGAP1P46060 587 aaPredicted RBP18.25■□□□□ 0.51
GPATCH2L-204ENST00000554125 UBTFP17480 764 aaKnown RBP18.22■□□□□ 0.51
GPATCH2L-204ENST00000554125 ATP1B4Q9UN42 357 aaPredicted RBP18.21■□□□□ 0.51
GPATCH2L-204ENST00000554125 RB1CC1Q8TDY2 1594 aa18.14■□□□□ 0.49
GPATCH2L-204ENST00000554125 ZCCHC6Q5VYS8 1495 aaKnown RBP18.11■□□□□ 0.49
GPATCH2L-204ENST00000554125 SCRIBQ14160 1630 aa18.06■□□□□ 0.48
GPATCH2L-204ENST00000554125 NACADO15069 1562 aa17.97■□□□□ 0.47
GPATCH2L-204ENST00000554125 TTBK1Q5TCY1 1321 aaPredicted RBP17.93■□□□□ 0.46
GPATCH2L-204ENST00000554125 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.86■□□□□ 0.45
GPATCH2L-204ENST00000554125 HNRNPUL2Q1KMD3 747 aaKnown RBP17.86■□□□□ 0.45
GPATCH2L-204ENST00000554125 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
GPATCH2L-204ENST00000554125 FBLN2P98095 1184 aa17.7■□□□□ 0.42
GPATCH2L-204ENST00000554125 CHIC1Q5VXU3 224 aa17.63■□□□□ 0.41
GPATCH2L-204ENST00000554125 DCAF1Q9Y4B6 1507 aa17.57■□□□□ 0.4
GPATCH2L-204ENST00000554125 PCGF6Q9BYE7 350 aa17.49■□□□□ 0.39
GPATCH2L-204ENST00000554125 CCER1Q8TC90 406 aaPredicted RBP17.39■□□□□ 0.37
GPATCH2L-204ENST00000554125 BAZ1BQ9UIG0 1483 aaKnown RBP17.38■□□□□ 0.37
GPATCH2L-204ENST00000554125 LOC105371045A0A1W2PR82 267 aa17.34■□□□□ 0.37
GPATCH2L-204ENST00000554125 PPARGC1BQ86YN6 1023 aaKnown RBP17.33■□□□□ 0.37
GPATCH2L-204ENST00000554125 ITGAEP38570 1179 aa17.33■□□□□ 0.36
GPATCH2L-204ENST00000554125 MYO15BQ96JP2 1530 aa17.3■□□□□ 0.36
GPATCH2L-204ENST00000554125 CSRNP3Q8WYN3 585 aa17.29■□□□□ 0.36
GPATCH2L-204ENST00000554125 ZEB1P37275 1124 aaPredicted RBP17.28■□□□□ 0.36
GPATCH2L-204ENST00000554125 BAZ1AQ9NRL2 1556 aaPredicted RBP17.27■□□□□ 0.36
GPATCH2L-204ENST00000554125 ERCC6Q03468 1493 aa17.27■□□□□ 0.35
GPATCH2L-204ENST00000554125 NPM1P06748 294 aaKnown RBP eCLIP17.27■□□□□ 0.35
GPATCH2L-204ENST00000554125 RSF1Q96T23 1441 aaPredicted RBP17.22■□□□□ 0.35
GPATCH2L-204ENST00000554125 CHMP7Q8WUX9 453 aaPredicted RBP17.21■□□□□ 0.35
GPATCH2L-204ENST00000554125 CDK11AQ9UQ88 783 aaPredicted RBP17.19■□□□□ 0.34
GPATCH2L-204ENST00000554125 TRIM26Q12899 539 aaPredicted RBP17.15■□□□□ 0.34
GPATCH2L-204ENST00000554125 FAM50AQ14320 339 aaKnown RBP17.15■□□□□ 0.34
GPATCH2L-204ENST00000554125 P3H3Q8IVL6 736 aa17.15■□□□□ 0.34
GPATCH2L-204ENST00000554125 SMARCA2P51531 1590 aa17.08■□□□□ 0.33
GPATCH2L-204ENST00000554125 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
GPATCH2L-204ENST00000554125 ARID3CA6NKF2 412 aa17.04■□□□□ 0.32
GPATCH2L-204ENST00000554125 TRIM52Q96A61 297 aa16.99■□□□□ 0.31
GPATCH2L-204ENST00000554125 PDS5BQ9NTI5 1447 aa16.99■□□□□ 0.31
GPATCH2L-204ENST00000554125 ESF1Q9H501 851 aaKnown RBP16.95■□□□□ 0.3
GPATCH2L-204ENST00000554125 WRNQ14191 1432 aaPredicted RBP eCLIP16.94■□□□□ 0.3
GPATCH2L-204ENST00000554125 PELP1Q8IZL8 1130 aaKnown RBP16.93■□□□□ 0.3
GPATCH2L-204ENST00000554125 ZNF777Q9ULD5 760 aaPredicted RBP16.93■□□□□ 0.3
GPATCH2L-204ENST00000554125 KIF27Q86VH2 1401 aa16.87■□□□□ 0.29
GPATCH2L-204ENST00000554125 MROH2BQ7Z745 1585 aa16.85■□□□□ 0.29
GPATCH2L-204ENST00000554125 EEA1Q15075 1411 aa16.85■□□□□ 0.29
GPATCH2L-204ENST00000554125 POLR3GLQ9BT43 218 aa16.84■□□□□ 0.29
GPATCH2L-204ENST00000554125 ATAD2BQ9ULI0 1458 aa16.77■□□□□ 0.27
GPATCH2L-204ENST00000554125 SLC4A1APQ9BWU0 796 aaKnown RBP16.76■□□□□ 0.27
GPATCH2L-204ENST00000554125 CADPSQ9ULU8 1353 aa16.76■□□□□ 0.27
GPATCH2L-204ENST00000554125 BCANQ96GW7 911 aa16.76■□□□□ 0.27
GPATCH2L-204ENST00000554125 CCDC88BA6NC98 1476 aa16.73■□□□□ 0.27
GPATCH2L-204ENST00000554125 PLEKHD1A6NEE1 506 aa16.72■□□□□ 0.27
GPATCH2L-204ENST00000554125 TOP2AP11388 1531 aaKnown RBP16.69■□□□□ 0.26
GPATCH2L-204ENST00000554125 SMARCA4P51532 1647 aa16.68■□□□□ 0.26
GPATCH2L-204ENST00000554125 MTUS2Q5JR59 1369 aa16.68■□□□□ 0.26
GPATCH2L-204ENST00000554125 TSPY4P0CV99 314 aa16.67■□□□□ 0.26
GPATCH2L-204ENST00000554125 TSPY10P0CW01 314 aa16.67■□□□□ 0.26
GPATCH2L-204ENST00000554125 KCNH8Q96L42 1107 aa16.67■□□□□ 0.26
GPATCH2L-204ENST00000554125 STAG3Q9UJ98 1225 aa16.66■□□□□ 0.26
GPATCH2L-204ENST00000554125 CUX2O14529 1486 aa16.65■□□□□ 0.26
GPATCH2L-204ENST00000554125 GOLGA3Q08378 1498 aa16.65■□□□□ 0.26
GPATCH2L-204ENST00000554125 SOGA1O94964 1423 aa16.64■□□□□ 0.25
GPATCH2L-204ENST00000554125 CEP164Q9UPV0 1460 aa16.64■□□□□ 0.25
GPATCH2L-204ENST00000554125 NEUROD1Q13562 356 aa16.63■□□□□ 0.25
GPATCH2L-204ENST00000554125 CLIP1P30622 1438 aa16.62■□□□□ 0.25
GPATCH2L-204ENST00000554125 CENPBP07199 599 aaPredicted RBP16.62■□□□□ 0.25
GPATCH2L-204ENST00000554125 PLPPR3Q6T4P5 718 aa16.6■□□□□ 0.25
GPATCH2L-204ENST00000554125 CARMIL1Q5VZK9 1371 aa16.6■□□□□ 0.25
GPATCH2L-204ENST00000554125 ZNF326Q5BKZ1 582 aaKnown RBP16.59■□□□□ 0.25
GPATCH2L-204ENST00000554125 WIZO95785 1651 aa16.59■□□□□ 0.25
GPATCH2L-204ENST00000554125 EIF4G1Q04637 1599 aaKnown RBP16.58■□□□□ 0.24
GPATCH2L-204ENST00000554125 TRHP20396 242 aaPredicted RBP16.57■□□□□ 0.24
GPATCH2L-204ENST00000554125 ABCC8Q09428 1581 aa16.55■□□□□ 0.24
GPATCH2L-204ENST00000554125 CHGAP10645 457 aaKnown RBP16.54■□□□□ 0.24
GPATCH2L-204ENST00000554125 NCAPD3P42695 1498 aa16.53■□□□□ 0.24
GPATCH2L-204ENST00000554125 TDRD9Q8NDG6 1382 aaKnown RBP16.52■□□□□ 0.24
GPATCH2L-204ENST00000554125 CARMIL2Q6F5E8 1435 aa16.52■□□□□ 0.23
GPATCH2L-204ENST00000554125 FANCD2Q9BXW9 1451 aa16.51■□□□□ 0.23
GPATCH2L-204ENST00000554125 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.49■□□□□ 0.231e-6■□□□□ 10.7
GPATCH2L-204ENST00000554125 CNGB1Q14028 1251 aaPredicted RBP16.48■□□□□ 0.23
GPATCH2L-204ENST00000554125 NEFLP07196 543 aa16.47■□□□□ 0.23
GPATCH2L-204ENST00000554125 ARID4BQ4LE39 1312 aaPredicted RBP16.47■□□□□ 0.23
GPATCH2L-204ENST00000554125 CHIC2Q9UKJ5 165 aa16.46■□□□□ 0.23
GPATCH2L-204ENST00000554125 CFDP1Q9UEE9 299 aaPredicted RBP16.44■□□□□ 0.22
GPATCH2L-204ENST00000554125 TNIKQ9UKE5 1360 aa16.44■□□□□ 0.22
GPATCH2L-204ENST00000554125 ACIN1Q9UKV3 1341 aaKnown RBP16.42■□□□□ 0.22
GPATCH2L-204ENST00000554125 FHAD1B1AJZ9 1412 aa16.4■□□□□ 0.22
GPATCH2L-204ENST00000554125 CEP162Q5TB80 1403 aa16.4■□□□□ 0.22
GPATCH2L-204ENST00000554125 OSCARQ8IYS5 282 aa16.39■□□□□ 0.21
GPATCH2L-204ENST00000554125 CC2D2AQ9P2K1 1620 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms