RNA–Protein interactions for RNA: ENST00000552189.5

SENP1-210, Transcript of SUMO specific peptidase 1, humanhuman

TSL 1 (best)

Gene SENP1, Length 4,967 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP1-210ENST00000552189 DCAF8L2P0C7V8 631 aa15.12■□□□□ 0.01
SENP1-210ENST00000552189 NISCHQ9Y2I1 1504 aa14.96□□□□□ -0.01
SENP1-210ENST00000552189 SHROOM4Q9ULL8 1493 aa13.79□□□□□ -0.2
SENP1-210ENST00000552189 SUPT5HO00267 1087 aaKnown RBP13.69□□□□□ -0.22
SENP1-210ENST00000552189 ABCC9O60706 1549 aa13.41□□□□□ -0.26
SENP1-210ENST00000552189 PABPN1Q86U42 306 aaKnown RBP eCLIP13.16□□□□□ -0.3
SENP1-210ENST00000552189 EHMT2Q96KQ7 1210 aa13.14□□□□□ -0.31
SENP1-210ENST00000552189 FAM9AQ8IZU1 332 aaPredicted RBP12.95□□□□□ -0.34
SENP1-210ENST00000552189 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
SENP1-210ENST00000552189 APLP2Q06481 763 aa12.74□□□□□ -0.37
SENP1-210ENST00000552189 TRIM41Q8WV44 630 aa12.72□□□□□ -0.37
SENP1-210ENST00000552189 ATP1B4Q9UN42 357 aaPredicted RBP12.69□□□□□ -0.38
SENP1-210ENST00000552189 TTBK1Q5TCY1 1321 aaPredicted RBP12.62□□□□□ -0.39
SENP1-210ENST00000552189 UBTFP17480 764 aaKnown RBP12.58□□□□□ -0.4
SENP1-210ENST00000552189 CCDC180Q9P1Z9 1646 aa12.48□□□□□ -0.41
SENP1-210ENST00000552189 SCRIBQ14160 1630 aa12.47□□□□□ -0.41
SENP1-210ENST00000552189 FBLN2P98095 1184 aa12.47□□□□□ -0.41
SENP1-210ENST00000552189 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.46□□□□□ -0.41
SENP1-210ENST00000552189 HNRNPUL2Q1KMD3 747 aaKnown RBP12.46□□□□□ -0.41
SENP1-210ENST00000552189 RB1CC1Q8TDY2 1594 aa12.4□□□□□ -0.42
SENP1-210ENST00000552189 MYT1LQ9UL68 1186 aa12.38□□□□□ -0.43
SENP1-210ENST00000552189 ZCCHC6Q5VYS8 1495 aaKnown RBP12.31□□□□□ -0.44
SENP1-210ENST00000552189 NACADO15069 1562 aa12.23□□□□□ -0.45
SENP1-210ENST00000552189 PPARGC1BQ86YN6 1023 aaKnown RBP12.09□□□□□ -0.47
SENP1-210ENST00000552189 CHIC1Q5VXU3 224 aa12.08□□□□□ -0.48
SENP1-210ENST00000552189 ITGAEP38570 1179 aa12.04□□□□□ -0.48
SENP1-210ENST00000552189 ERCC6Q03468 1493 aa12.03□□□□□ -0.48
SENP1-210ENST00000552189 ARID3CA6NKF2 412 aa12.01□□□□□ -0.49
SENP1-210ENST00000552189 NPM1P06748 294 aaKnown RBP eCLIP12.01□□□□□ -0.49
SENP1-210ENST00000552189 PCGF6Q9BYE7 350 aa12□□□□□ -0.49
SENP1-210ENST00000552189 CHMP7Q8WUX9 453 aaPredicted RBP11.99□□□□□ -0.49
SENP1-210ENST00000552189 LOC105371045A0A1W2PR82 267 aa11.99□□□□□ -0.49
SENP1-210ENST00000552189 P3H3Q8IVL6 736 aa11.99□□□□□ -0.49
SENP1-210ENST00000552189 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
SENP1-210ENST00000552189 CSRNP3Q8WYN3 585 aa11.87□□□□□ -0.51
SENP1-210ENST00000552189 CECR2Q9BXF3 1484 aa11.85□□□□□ -0.51
SENP1-210ENST00000552189 CCER1Q8TC90 406 aaPredicted RBP11.84□□□□□ -0.51
SENP1-210ENST00000552189 DCAF1Q9Y4B6 1507 aa11.83□□□□□ -0.52
SENP1-210ENST00000552189 FAM50AQ14320 339 aaKnown RBP11.82□□□□□ -0.52
SENP1-210ENST00000552189 PLPPR3Q6T4P5 718 aa11.81□□□□□ -0.52
SENP1-210ENST00000552189 RSF1Q96T23 1441 aaPredicted RBP11.8□□□□□ -0.52
SENP1-210ENST00000552189 CDK11AQ9UQ88 783 aaPredicted RBP11.79□□□□□ -0.52
SENP1-210ENST00000552189 ZNF777Q9ULD5 760 aaPredicted RBP11.79□□□□□ -0.52
SENP1-210ENST00000552189 ESF1Q9H501 851 aaKnown RBP11.78□□□□□ -0.52
SENP1-210ENST00000552189 TRHP20396 242 aaPredicted RBP11.77□□□□□ -0.52
SENP1-210ENST00000552189 BAZ1AQ9NRL2 1556 aaPredicted RBP11.77□□□□□ -0.53
SENP1-210ENST00000552189 PDS5BQ9NTI5 1447 aa11.71□□□□□ -0.53
SENP1-210ENST00000552189 TRIM52Q96A61 297 aa11.71□□□□□ -0.54
SENP1-210ENST00000552189 BCANQ96GW7 911 aa11.69□□□□□ -0.54
SENP1-210ENST00000552189 KCNH8Q96L42 1107 aa11.69□□□□□ -0.54
SENP1-210ENST00000552189 MYO15BQ96JP2 1530 aa11.67□□□□□ -0.54
SENP1-210ENST00000552189 POLR3GLQ9BT43 218 aa11.66□□□□□ -0.54
SENP1-210ENST00000552189 SMARCA2P51531 1590 aa11.64□□□□□ -0.55
SENP1-210ENST00000552189 SLC4A1APQ9BWU0 796 aaKnown RBP11.62□□□□□ -0.55
SENP1-210ENST00000552189 WRNQ14191 1432 aaPredicted RBP eCLIP11.61□□□□□ -0.55
SENP1-210ENST00000552189 MROH2BQ7Z745 1585 aa11.59□□□□□ -0.55
SENP1-210ENST00000552189 DNAJC5BQ9UF47 199 aa11.59□□□□□ -0.55
SENP1-210ENST00000552189 CADPSQ9ULU8 1353 aa11.58□□□□□ -0.56
SENP1-210ENST00000552189 STAG3Q9UJ98 1225 aa11.57□□□□□ -0.56
SENP1-210ENST00000552189 PLEKHD1A6NEE1 506 aa11.56□□□□□ -0.56
SENP1-210ENST00000552189 ARID4BQ4LE39 1312 aaPredicted RBP11.55□□□□□ -0.56
SENP1-210ENST00000552189 TRIM26Q12899 539 aaPredicted RBP11.55□□□□□ -0.56
SENP1-210ENST00000552189 ATAD2BQ9ULI0 1458 aa11.55□□□□□ -0.56
SENP1-210ENST00000552189 TDRD9Q8NDG6 1382 aaKnown RBP11.54□□□□□ -0.56
SENP1-210ENST00000552189 KIF27Q86VH2 1401 aa11.53□□□□□ -0.56
SENP1-210ENST00000552189 CNGB1Q14028 1251 aaPredicted RBP11.53□□□□□ -0.56
SENP1-210ENST00000552189 CHGAP10645 457 aaKnown RBP11.52□□□□□ -0.56
SENP1-210ENST00000552189 ZNF326Q5BKZ1 582 aaKnown RBP11.51□□□□□ -0.57
SENP1-210ENST00000552189 TSPY4P0CV99 314 aa11.49□□□□□ -0.57
SENP1-210ENST00000552189 TSPY10P0CW01 314 aa11.49□□□□□ -0.57
SENP1-210ENST00000552189 OSCARQ8IYS5 282 aa11.49□□□□□ -0.57
SENP1-210ENST00000552189 SOGA1O94964 1423 aa11.49□□□□□ -0.57
SENP1-210ENST00000552189 CYB5RLQ6IPT4 315 aa11.48□□□□□ -0.57
SENP1-210ENST00000552189 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.48□□□□□ -0.57
SENP1-210ENST00000552189 CUX2O14529 1486 aa11.47□□□□□ -0.57
SENP1-210ENST00000552189 CCDC88BA6NC98 1476 aa11.47□□□□□ -0.57
SENP1-210ENST00000552189 ZEB1P37275 1124 aaPredicted RBP11.46□□□□□ -0.57
SENP1-210ENST00000552189 MTUS2Q5JR59 1369 aa11.46□□□□□ -0.58
SENP1-210ENST00000552189 NEUROD1Q13562 356 aa11.46□□□□□ -0.58
SENP1-210ENST00000552189 CEP164Q9UPV0 1460 aa11.45□□□□□ -0.58
SENP1-210ENST00000552189 CHIC2Q9UKJ5 165 aa11.44□□□□□ -0.58
SENP1-210ENST00000552189 EIF4G1Q04637 1599 aaKnown RBP11.44□□□□□ -0.58
SENP1-210ENST00000552189 CARMIL1Q5VZK9 1371 aa11.41□□□□□ -0.58
SENP1-210ENST00000552189 FANCD2Q9BXW9 1451 aa11.39□□□□□ -0.59
SENP1-210ENST00000552189 SMARCA4P51532 1647 aa11.37□□□□□ -0.59
SENP1-210ENST00000552189 WIZO95785 1651 aa11.36□□□□□ -0.59
SENP1-210ENST00000552189 CFDP1Q9UEE9 299 aaPredicted RBP11.36□□□□□ -0.59
SENP1-210ENST00000552189 NCAPD3P42695 1498 aa11.36□□□□□ -0.59
SENP1-210ENST00000552189 MLECQ14165 292 aa11.35□□□□□ -0.59
SENP1-210ENST00000552189 SENP3Q9H4L4 574 aaPredicted RBP11.35□□□□□ -0.59
SENP1-210ENST00000552189 CLIP1P30622 1438 aa11.34□□□□□ -0.59
SENP1-210ENST00000552189 EEA1Q15075 1411 aa11.34□□□□□ -0.59
SENP1-210ENST00000552189 JPH4Q96JJ6 628 aa11.34□□□□□ -0.59
SENP1-210ENST00000552189 CC2D2AQ9P2K1 1620 aa11.34□□□□□ -0.59
SENP1-210ENST00000552189 CARMIL2Q6F5E8 1435 aa11.33□□□□□ -0.6
SENP1-210ENST00000552189 TOP2AP11388 1531 aaKnown RBP11.32□□□□□ -0.6
SENP1-210ENST00000552189 PPP1R15AO75807 674 aaPredicted RBP11.29□□□□□ -0.6
SENP1-210ENST00000552189 C14orf37Q86TY3 774 aa11.28□□□□□ -0.6
SENP1-210ENST00000552189 GOLGA3Q08378 1498 aa11.27□□□□□ -0.61
SENP1-210ENST00000552189 NESP48681 1621 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms