RNA–Protein interactions for RNA: ENST00000549913.6

RPH3A-217, Transcript of rabphilin 3A, humanhuman

TSL 1 (best)

Gene RPH3A, Length 5,188 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3A-217ENST00000549913 DCAF8L2P0C7V8 631 aa19.44■□□□□ 0.7
RPH3A-217ENST00000549913 NISCHQ9Y2I1 1504 aa19.28■□□□□ 0.68
RPH3A-217ENST00000549913 SUPT5HO00267 1087 aaKnown RBP18.69■□□□□ 0.58
RPH3A-217ENST00000549913 SHROOM4Q9ULL8 1493 aa18.41■□□□□ 0.54
RPH3A-217ENST00000549913 EHMT2Q96KQ7 1210 aa17.86■□□□□ 0.45
RPH3A-217ENST00000549913 PCGF6Q9BYE7 350 aa17.68■□□□□ 0.42
RPH3A-217ENST00000549913 APLP2Q06481 763 aa17.57■□□□□ 0.4
RPH3A-217ENST00000549913 FAM9AQ8IZU1 332 aaPredicted RBP17.57■□□□□ 0.4
RPH3A-217ENST00000549913 PELP1Q8IZL8 1130 aaKnown RBP17.56■□□□□ 0.4
RPH3A-217ENST00000549913 ZEB1P37275 1124 aaPredicted RBP17.38■□□□□ 0.37
RPH3A-217ENST00000549913 TRIM41Q8WV44 630 aa17.35■□□□□ 0.37
RPH3A-217ENST00000549913 TTBK1Q5TCY1 1321 aaPredicted RBP17.29■□□□□ 0.36
RPH3A-217ENST00000549913 CENPBP07199 599 aaPredicted RBP17.23■□□□□ 0.35
RPH3A-217ENST00000549913 CCER1Q8TC90 406 aaPredicted RBP17.17■□□□□ 0.34
RPH3A-217ENST00000549913 RANGAP1P46060 587 aaPredicted RBP17.08■□□□□ 0.33
RPH3A-217ENST00000549913 UBTFP17480 764 aaKnown RBP17.05■□□□□ 0.32
RPH3A-217ENST00000549913 HRCP23327 699 aa17.04■□□□□ 0.32
RPH3A-217ENST00000549913 TRIM26Q12899 539 aaPredicted RBP16.99■□□□□ 0.31
RPH3A-217ENST00000549913 ATP1B4Q9UN42 357 aaPredicted RBP16.89■□□□□ 0.29
RPH3A-217ENST00000549913 CHIC1Q5VXU3 224 aa16.87■□□□□ 0.29
RPH3A-217ENST00000549913 PPARGC1BQ86YN6 1023 aaKnown RBP16.82■□□□□ 0.28
RPH3A-217ENST00000549913 YTHDC1Q96MU7 727 aaKnown RBP16.8■□□□□ 0.28
RPH3A-217ENST00000549913 MYT1Q01538 1121 aa16.79■□□□□ 0.28
RPH3A-217ENST00000549913 LOC105371045A0A1W2PR82 267 aa16.79■□□□□ 0.28
RPH3A-217ENST00000549913 ERICH6Q7L0X2 663 aa16.78■□□□□ 0.28
RPH3A-217ENST00000549913 NEFLP07196 543 aa16.66■□□□□ 0.26
RPH3A-217ENST00000549913 ITGAEP38570 1179 aa16.45■□□□□ 0.22
RPH3A-217ENST00000549913 HNRNPUL2Q1KMD3 747 aaKnown RBP16.44■□□□□ 0.22
RPH3A-217ENST00000549913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.4■□□□□ 0.22
RPH3A-217ENST00000549913 DIEXFQ68CQ4 756 aaKnown RBP16.38■□□□□ 0.21
RPH3A-217ENST00000549913 ABCC9O60706 1549 aa16.33■□□□□ 0.2
RPH3A-217ENST00000549913 PABPN1Q86U42 306 aaKnown RBP eCLIP16.21■□□□□ 0.19
RPH3A-217ENST00000549913 POLR3GLQ9BT43 218 aa16.17■□□□□ 0.18
RPH3A-217ENST00000549913 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
RPH3A-217ENST00000549913 MYT1LQ9UL68 1186 aa16.11■□□□□ 0.17
RPH3A-217ENST00000549913 FAM50AQ14320 339 aaKnown RBP16.07■□□□□ 0.16
RPH3A-217ENST00000549913 DAXXQ9UER7 740 aaPredicted RBP16.03■□□□□ 0.16
RPH3A-217ENST00000549913 ZNF316A6NFI3 1004 aaPredicted RBP16.02■□□□□ 0.15
RPH3A-217ENST00000549913 CNGB1Q14028 1251 aaPredicted RBP16■□□□□ 0.15
RPH3A-217ENST00000549913 ZCCHC6Q5VYS8 1495 aaKnown RBP16■□□□□ 0.15
RPH3A-217ENST00000549913 ACIN1Q9UKV3 1341 aaKnown RBP15.99■□□□□ 0.15
RPH3A-217ENST00000549913 CSRNP3Q8WYN3 585 aa15.97■□□□□ 0.15
RPH3A-217ENST00000549913 TRIM52Q96A61 297 aa15.93■□□□□ 0.14
RPH3A-217ENST00000549913 DCAF1Q9Y4B6 1507 aa15.93■□□□□ 0.14
RPH3A-217ENST00000549913 NEUROD1Q13562 356 aa15.92■□□□□ 0.14
RPH3A-217ENST00000549913 BCANQ96GW7 911 aa15.87■□□□□ 0.13
RPH3A-217ENST00000549913 ANP32CO43423 234 aa15.84■□□□□ 0.13
RPH3A-217ENST00000549913 RTL5Q5HYW3 569 aaPredicted RBP15.84■□□□□ 0.13
RPH3A-217ENST00000549913 SCRIBQ14160 1630 aa15.82■□□□□ 0.12
RPH3A-217ENST00000549913 SLC4A1APQ9BWU0 796 aaKnown RBP15.77■□□□□ 0.12
RPH3A-217ENST00000549913 CCDC180Q9P1Z9 1646 aa15.76■□□□□ 0.11
RPH3A-217ENST00000549913 CDK11AQ9UQ88 783 aaPredicted RBP15.75■□□□□ 0.11
RPH3A-217ENST00000549913 P3H3Q8IVL6 736 aa15.73■□□□□ 0.11
RPH3A-217ENST00000549913 ZNF326Q5BKZ1 582 aaKnown RBP15.71■□□□□ 0.11
RPH3A-217ENST00000549913 CLSPNQ9HAW4 1339 aa15.69■□□□□ 0.1
RPH3A-217ENST00000549913 FBLN2P98095 1184 aa15.69■□□□□ 0.1
RPH3A-217ENST00000549913 MYO15BQ96JP2 1530 aa15.61■□□□□ 0.09
RPH3A-217ENST00000549913 SCAF1Q9H7N4 1312 aaKnown RBP15.59■□□□□ 0.09
RPH3A-217ENST00000549913 ARID3CA6NKF2 412 aa15.59■□□□□ 0.09
RPH3A-217ENST00000549913 FKBP8Q14318 412 aa15.53■□□□□ 0.08
RPH3A-217ENST00000549913 ZNF777Q9ULD5 760 aaPredicted RBP15.51■□□□□ 0.07
RPH3A-217ENST00000549913 TONSLQ96HA7 1378 aa15.5■□□□□ 0.07
RPH3A-217ENST00000549913 RSF1Q96T23 1441 aaPredicted RBP15.49■□□□□ 0.07
RPH3A-217ENST00000549913 DDX10Q13206 875 aaKnown RBP15.47■□□□□ 0.07
RPH3A-217ENST00000549913 MIER1Q8N108 512 aa15.45■□□□□ 0.06
RPH3A-217ENST00000549913 ANP32AP39687 249 aaKnown RBP15.45■□□□□ 0.06
RPH3A-217ENST00000549913 CLIP1P30622 1438 aa15.43■□□□□ 0.06
RPH3A-217ENST00000549913 EEA1Q15075 1411 aa15.41■□□□□ 0.06
RPH3A-217ENST00000549913 HNRNPUQ00839 825 aaKnown RBP eCLIP15.41■□□□□ 0.06
RPH3A-217ENST00000549913 RB1CC1Q8TDY2 1594 aa15.39■□□□□ 0.05
RPH3A-217ENST00000549913 CANXP27824 592 aaKnown RBP15.37■□□□□ 0.05
RPH3A-217ENST00000549913 ZBTB47Q9UFB7 747 aaPredicted RBP15.35■□□□□ 0.05
RPH3A-217ENST00000549913 CEP162Q5TB80 1403 aa15.34■□□□□ 0.05
RPH3A-217ENST00000549913 GOLGA3Q08378 1498 aa15.34■□□□□ 0.05
RPH3A-217ENST00000549913 MTUS2Q5JR59 1369 aa15.33■□□□□ 0.04
RPH3A-217ENST00000549913 CHIC2Q9UKJ5 165 aa15.32■□□□□ 0.04
RPH3A-217ENST00000549913 NEFMP07197 916 aa15.32■□□□□ 0.04
RPH3A-217ENST00000549913 NPM2Q86SE8 214 aaKnown RBP15.31■□□□□ 0.04
RPH3A-217ENST00000549913 FAM9BQ8IZU0 186 aa15.31■□□□□ 0.04
RPH3A-217ENST00000549913 NACADO15069 1562 aa15.31■□□□□ 0.04
RPH3A-217ENST00000549913 WRNQ14191 1432 aaPredicted RBP eCLIP15.29■□□□□ 0.04
RPH3A-217ENST00000549913 TNIKQ9UKE5 1360 aa15.25■□□□□ 0.03
RPH3A-217ENST00000549913 TSPY4P0CV99 314 aa15.22■□□□□ 0.03
RPH3A-217ENST00000549913 TSPY10P0CW01 314 aa15.22■□□□□ 0.03
RPH3A-217ENST00000549913 CCDC136Q96JN2 1154 aa15.21■□□□□ 0.02
RPH3A-217ENST00000549913 TMC1Q8TDI8 760 aa15.19■□□□□ 0.02
RPH3A-217ENST00000549913 MRS2Q9HD23 443 aa15.19■□□□□ 0.02
RPH3A-217ENST00000549913 BAZ1BQ9UIG0 1483 aaKnown RBP15.19■□□□□ 0.02
RPH3A-217ENST00000549913 CEP164Q9UPV0 1460 aa15.19■□□□□ 0.02
RPH3A-217ENST00000549913 CHGAP10645 457 aaKnown RBP15.19■□□□□ 0.02
RPH3A-217ENST00000549913 HIRIP3Q9BW71 556 aaPredicted RBP15.18■□□□□ 0.02
RPH3A-217ENST00000549913 BCL11AQ9H165 835 aa15.16■□□□□ 0.02
RPH3A-217ENST00000549913 KIF27Q86VH2 1401 aa15.16■□□□□ 0.02
RPH3A-217ENST00000549913 BAZ1AQ9NRL2 1556 aaPredicted RBP15.16■□□□□ 0.02
RPH3A-217ENST00000549913 SLC24A1O60721 1099 aa15.16■□□□□ 0.02
RPH3A-217ENST00000549913 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.16■□□□□ 0.02
RPH3A-217ENST00000549913 EIF4G2P78344 907 aaKnown RBP eCLIP15.15■□□□□ 0.02
RPH3A-217ENST00000549913 CHMP7Q8WUX9 453 aaPredicted RBP15.15■□□□□ 0.02
RPH3A-217ENST00000549913 NPM1P06748 294 aaKnown RBP eCLIP15.14■□□□□ 0.01
RPH3A-217ENST00000549913 IRX6P78412 446 aaPredicted RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms