RNA–Protein interactions for RNA: ENST00000546141.5

GLI1-208, Transcript of GLI family zinc finger 1, humanhuman

TSL 5 BASIC

Gene GLI1, Length 3,475 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GLI1-208ENST00000546141 NISCHQ9Y2I1 1504 aa19.99■□□□□ 0.79
GLI1-208ENST00000546141 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
GLI1-208ENST00000546141 SUPT5HO00267 1087 aaKnown RBP17.34■□□□□ 0.37
GLI1-208ENST00000546141 DCAF8L2P0C7V8 631 aa17.08■□□□□ 0.32
GLI1-208ENST00000546141 ZCCHC6Q5VYS8 1495 aaKnown RBP16.9■□□□□ 0.3
GLI1-208ENST00000546141 CCDC180Q9P1Z9 1646 aa16.75■□□□□ 0.27
GLI1-208ENST00000546141 PELP1Q8IZL8 1130 aaKnown RBP16.74■□□□□ 0.27
GLI1-208ENST00000546141 CHIC1Q5VXU3 224 aa16.72■□□□□ 0.27
GLI1-208ENST00000546141 MYO15BQ96JP2 1530 aa16.7■□□□□ 0.26
GLI1-208ENST00000546141 HRCP23327 699 aa16.59■□□□□ 0.25
GLI1-208ENST00000546141 PCGF6Q9BYE7 350 aa16.54■□□□□ 0.24
GLI1-208ENST00000546141 LOC105371045A0A1W2PR82 267 aa16.41■□□□□ 0.22
GLI1-208ENST00000546141 PPARGC1BQ86YN6 1023 aaKnown RBP16.33■□□□□ 0.2
GLI1-208ENST00000546141 MYT1Q01538 1121 aa16.27■□□□□ 0.19
GLI1-208ENST00000546141 DCAF1Q9Y4B6 1507 aa16.19■□□□□ 0.18
GLI1-208ENST00000546141 EHMT2Q96KQ7 1210 aa16.13■□□□□ 0.17
GLI1-208ENST00000546141 FAM9AQ8IZU1 332 aaPredicted RBP16.1■□□□□ 0.17
GLI1-208ENST00000546141 SCRIBQ14160 1630 aa16.06■□□□□ 0.16
GLI1-208ENST00000546141 TRIM41Q8WV44 630 aa16■□□□□ 0.15
GLI1-208ENST00000546141 TRIM26Q12899 539 aaPredicted RBP15.99■□□□□ 0.15
GLI1-208ENST00000546141 ABCC9O60706 1549 aa15.98■□□□□ 0.15
GLI1-208ENST00000546141 RSF1Q96T23 1441 aaPredicted RBP15.95■□□□□ 0.14
GLI1-208ENST00000546141 RB1CC1Q8TDY2 1594 aa15.86■□□□□ 0.13
GLI1-208ENST00000546141 SCAF1Q9H7N4 1312 aaKnown RBP15.84■□□□□ 0.13
GLI1-208ENST00000546141 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
GLI1-208ENST00000546141 MROH2BQ7Z745 1585 aa15.65■□□□□ 0.1
GLI1-208ENST00000546141 TTBK1Q5TCY1 1321 aaPredicted RBP15.62■□□□□ 0.09
GLI1-208ENST00000546141 ZEB1P37275 1124 aaPredicted RBP15.61■□□□□ 0.09
GLI1-208ENST00000546141 WIZO95785 1651 aa15.58■□□□□ 0.09
GLI1-208ENST00000546141 NACADO15069 1562 aa15.53■□□□□ 0.08
GLI1-208ENST00000546141 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.52■□□□□ 0.08
GLI1-208ENST00000546141 CCER1Q8TC90 406 aaPredicted RBP15.45■□□□□ 0.06
GLI1-208ENST00000546141 ACIN1Q9UKV3 1341 aaKnown RBP15.42■□□□□ 0.06
GLI1-208ENST00000546141 ABCC8Q09428 1581 aa15.38■□□□□ 0.05
GLI1-208ENST00000546141 BAZ1AQ9NRL2 1556 aaPredicted RBP15.35■□□□□ 0.05
GLI1-208ENST00000546141 CCDC88BA6NC98 1476 aa15.32■□□□□ 0.04
GLI1-208ENST00000546141 UBTFP17480 764 aaKnown RBP15.3■□□□□ 0.04
GLI1-208ENST00000546141 NEUROD1Q13562 356 aa15.29■□□□□ 0.04
GLI1-208ENST00000546141 GTF3C3Q9Y5Q9 886 aa15.29■□□□□ 0.04
GLI1-208ENST00000546141 CENPBP07199 599 aaPredicted RBP15.28■□□□□ 0.04
GLI1-208ENST00000546141 PABPN1Q86U42 306 aaKnown RBP eCLIP15.28■□□□□ 0.04
GLI1-208ENST00000546141 SOGA1O94964 1423 aa15.27■□□□□ 0.03
GLI1-208ENST00000546141 EIF4G1Q04637 1599 aaKnown RBP15.24■□□□□ 0.03
GLI1-208ENST00000546141 CEP162Q5TB80 1403 aa15.22■□□□□ 0.03
GLI1-208ENST00000546141 TOP2AP11388 1531 aaKnown RBP15.21■□□□□ 0.03
GLI1-208ENST00000546141 RUSC2Q8N2Y8 1516 aa15.2■□□□□ 0.02
GLI1-208ENST00000546141 SMARCA4P51532 1647 aa15.19■□□□□ 0.02
GLI1-208ENST00000546141 RANGAP1P46060 587 aaPredicted RBP15.18■□□□□ 0.02
GLI1-208ENST00000546141 SMARCA2P51531 1590 aa15.18■□□□□ 0.02
GLI1-208ENST00000546141 CSRNP3Q8WYN3 585 aa15.18■□□□□ 0.02
GLI1-208ENST00000546141 DIEXFQ68CQ4 756 aaKnown RBP15.16■□□□□ 0.02
GLI1-208ENST00000546141 HNRNPUL2Q1KMD3 747 aaKnown RBP15.11■□□□□ 0.01
GLI1-208ENST00000546141 TNIKQ9UKE5 1360 aa15.09■□□□□ 0.01
GLI1-208ENST00000546141 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
GLI1-208ENST00000546141 WRNQ14191 1432 aaPredicted RBP eCLIP15.07■□□□□ 0
GLI1-208ENST00000546141 YTHDC1Q96MU7 727 aaKnown RBP15.03■□□□□ -0
GLI1-208ENST00000546141 GOLGA3Q08378 1498 aa15□□□□□ -0.01
GLI1-208ENST00000546141 EEA1Q15075 1411 aa14.97□□□□□ -0.01
GLI1-208ENST00000546141 BCL11AQ9H165 835 aa14.97□□□□□ -0.01
GLI1-208ENST00000546141 ZNF316A6NFI3 1004 aaPredicted RBP14.95□□□□□ -0.02
GLI1-208ENST00000546141 APLP2Q06481 763 aa14.95□□□□□ -0.02
GLI1-208ENST00000546141 CLIP1P30622 1438 aa14.91□□□□□ -0.02
GLI1-208ENST00000546141 SYNJ1O43426 1573 aa14.91□□□□□ -0.02
GLI1-208ENST00000546141 BICRAQ9NZM4 1560 aa14.9□□□□□ -0.02
GLI1-208ENST00000546141 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
GLI1-208ENST00000546141 RAPGEF2Q9Y4G8 1499 aa14.85□□□□□ -0.03
GLI1-208ENST00000546141 MIER1Q8N108 512 aa14.85□□□□□ -0.03
GLI1-208ENST00000546141 BAZ1BQ9UIG0 1483 aaKnown RBP14.83□□□□□ -0.04
GLI1-208ENST00000546141 ATAD2BQ9ULI0 1458 aa14.81□□□□□ -0.04
GLI1-208ENST00000546141 VPS8Q8N3P4 1428 aa14.8□□□□□ -0.04
GLI1-208ENST00000546141 ANP32EQ9BTT0 268 aa14.77□□□□□ -0.04
GLI1-208ENST00000546141 KIF21BO75037 1637 aa14.76□□□□□ -0.05
GLI1-208ENST00000546141 PEG3Q9GZU2 1588 aa14.74□□□□□ -0.05
GLI1-208ENST00000546141 ITGAEP38570 1179 aa14.73□□□□□ -0.05
GLI1-208ENST00000546141 KANK4Q5T7N3 995 aaPredicted RBP14.7□□□□□ -0.06
GLI1-208ENST00000546141 TOP2BQ02880 1626 aa14.62□□□□□ -0.07
GLI1-208ENST00000546141 PRKCSHP14314 528 aaPredicted RBP14.61□□□□□ -0.07
GLI1-208ENST00000546141 ARAP1Q96P48 1450 aa14.59□□□□□ -0.07
GLI1-208ENST00000546141 DHX57Q6P158 1386 aaKnown RBP14.59□□□□□ -0.07
GLI1-208ENST00000546141 CLSPNQ9HAW4 1339 aa14.57□□□□□ -0.08
GLI1-208ENST00000546141 PRXQ9BXM0 1461 aa14.55□□□□□ -0.08
GLI1-208ENST00000546141 ATP1B4Q9UN42 357 aaPredicted RBP14.53□□□□□ -0.08
GLI1-208ENST00000546141 CUX1P39880 1505 aa14.53□□□□□ -0.08
GLI1-208ENST00000546141 KIF27Q86VH2 1401 aa14.52□□□□□ -0.09
GLI1-208ENST00000546141 BIVM-ERCC5R4GMW8 1640 aa14.51□□□□□ -0.09
GLI1-208ENST00000546141 P3H3Q8IVL6 736 aa14.5□□□□□ -0.09
GLI1-208ENST00000546141 TSHZ2Q9NRE2 1034 aa14.49□□□□□ -0.09
GLI1-208ENST00000546141 ERICH3Q5RHP9 1530 aa14.49□□□□□ -0.09
GLI1-208ENST00000546141 ERICH6Q7L0X2 663 aa14.49□□□□□ -0.09
GLI1-208ENST00000546141 CCNB3Q8WWL7 1395 aa14.46□□□□□ -0.09
GLI1-208ENST00000546141 SUPT16HQ9Y5B9 1047 aaKnown RBP14.46□□□□□ -0.1
GLI1-208ENST00000546141 ARHGAP35Q9NRY4 1499 aa14.45□□□□□ -0.1
GLI1-208ENST00000546141 FAM50AQ14320 339 aaKnown RBP14.45□□□□□ -0.1
GLI1-208ENST00000546141 CUX2O14529 1486 aa14.43□□□□□ -0.1
GLI1-208ENST00000546141 KCNH8Q96L42 1107 aa14.42□□□□□ -0.1
GLI1-208ENST00000546141 RRBP1Q9P2E9 1410 aaKnown RBP14.42□□□□□ -0.1
GLI1-208ENST00000546141 NCAPD3P42695 1498 aa14.41□□□□□ -0.1
GLI1-208ENST00000546141 RAB3GAP2Q9H2M9 1393 aa14.39□□□□□ -0.11
GLI1-208ENST00000546141 SIN3AQ96ST3 1273 aa14.39□□□□□ -0.11
GLI1-208ENST00000546141 HIRIP3Q9BW71 556 aaPredicted RBP14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms