RNA–Protein interactions for RNA: ENST00000539021.1

PPME1-205, Transcript of protein phosphatase methylesterase 1, humanhuman

TSL 2

Gene PPME1, Length 4,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPME1-205ENST00000539021 NISCHQ9Y2I1 1504 aa17.05■□□□□ 0.32
PPME1-205ENST00000539021 SHROOM4Q9ULL8 1493 aa14.95□□□□□ -0.02
PPME1-205ENST00000539021 SUPT5HO00267 1087 aaKnown RBP14.82□□□□□ -0.04
PPME1-205ENST00000539021 HRCP23327 699 aa14.5□□□□□ -0.09
PPME1-205ENST00000539021 ZCCHC6Q5VYS8 1495 aaKnown RBP14.46□□□□□ -0.1
PPME1-205ENST00000539021 CHIC1Q5VXU3 224 aa14.42□□□□□ -0.1
PPME1-205ENST00000539021 MYO15BQ96JP2 1530 aa14.4□□□□□ -0.1
PPME1-205ENST00000539021 PCGF6Q9BYE7 350 aa14.38□□□□□ -0.11
PPME1-205ENST00000539021 DCAF8L2P0C7V8 631 aa14.35□□□□□ -0.11
PPME1-205ENST00000539021 CCDC180Q9P1Z9 1646 aa14.3□□□□□ -0.12
PPME1-205ENST00000539021 PPARGC1BQ86YN6 1023 aaKnown RBP14.2□□□□□ -0.14
PPME1-205ENST00000539021 DCAF1Q9Y4B6 1507 aa14.09□□□□□ -0.15
PPME1-205ENST00000539021 LOC105371045A0A1W2PR82 267 aa14.07□□□□□ -0.16
PPME1-205ENST00000539021 TRIM26Q12899 539 aaPredicted RBP13.97□□□□□ -0.17
PPME1-205ENST00000539021 ZEB1P37275 1124 aaPredicted RBP13.81□□□□□ -0.2
PPME1-205ENST00000539021 TRIM41Q8WV44 630 aa13.75□□□□□ -0.21
PPME1-205ENST00000539021 FAM9AQ8IZU1 332 aaPredicted RBP13.71□□□□□ -0.21
PPME1-205ENST00000539021 ABCC9O60706 1549 aa13.7□□□□□ -0.22
PPME1-205ENST00000539021 PELP1Q8IZL8 1130 aaKnown RBP13.67□□□□□ -0.22
PPME1-205ENST00000539021 EHMT2Q96KQ7 1210 aa13.66□□□□□ -0.22
PPME1-205ENST00000539021 RSF1Q96T23 1441 aaPredicted RBP13.63□□□□□ -0.23
PPME1-205ENST00000539021 SCRIBQ14160 1630 aa13.59□□□□□ -0.23
PPME1-205ENST00000539021 SCAF1Q9H7N4 1312 aaKnown RBP13.54□□□□□ -0.24
PPME1-205ENST00000539021 RB1CC1Q8TDY2 1594 aa13.54□□□□□ -0.24
PPME1-205ENST00000539021 CCER1Q8TC90 406 aaPredicted RBP13.43□□□□□ -0.26
PPME1-205ENST00000539021 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
PPME1-205ENST00000539021 ACIN1Q9UKV3 1341 aaKnown RBP13.34□□□□□ -0.27
PPME1-205ENST00000539021 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
PPME1-205ENST00000539021 CENPBP07199 599 aaPredicted RBP13.3□□□□□ -0.28
PPME1-205ENST00000539021 NEUROD1Q13562 356 aa13.29□□□□□ -0.28
PPME1-205ENST00000539021 TTBK1Q5TCY1 1321 aaPredicted RBP13.29□□□□□ -0.28
PPME1-205ENST00000539021 MROH2BQ7Z745 1585 aa13.29□□□□□ -0.28
PPME1-205ENST00000539021 DIEXFQ68CQ4 756 aaKnown RBP13.28□□□□□ -0.28
PPME1-205ENST00000539021 WIZO95785 1651 aa13.24□□□□□ -0.29
PPME1-205ENST00000539021 GTF3C3Q9Y5Q9 886 aa13.23□□□□□ -0.29
PPME1-205ENST00000539021 NACADO15069 1562 aa13.2□□□□□ -0.3
PPME1-205ENST00000539021 BAZ1AQ9NRL2 1556 aaPredicted RBP13.15□□□□□ -0.3
PPME1-205ENST00000539021 CEP162Q5TB80 1403 aa13.12□□□□□ -0.31
PPME1-205ENST00000539021 WRNQ14191 1432 aaPredicted RBP eCLIP13.1□□□□□ -0.31
PPME1-205ENST00000539021 UBTFP17480 764 aaKnown RBP13.1□□□□□ -0.31
PPME1-205ENST00000539021 ABCC8Q09428 1581 aa13.09□□□□□ -0.31
PPME1-205ENST00000539021 ZNF316A6NFI3 1004 aaPredicted RBP13.08□□□□□ -0.32
PPME1-205ENST00000539021 EIF4G1Q04637 1599 aaKnown RBP13.08□□□□□ -0.32
PPME1-205ENST00000539021 YTHDC1Q96MU7 727 aaKnown RBP13.08□□□□□ -0.32
PPME1-205ENST00000539021 CCDC88BA6NC98 1476 aa13.08□□□□□ -0.32
PPME1-205ENST00000539021 MYT1Q01538 1121 aa13.07□□□□□ -0.32
PPME1-205ENST00000539021 TNIKQ9UKE5 1360 aa13.04□□□□□ -0.32
PPME1-205ENST00000539021 SOGA1O94964 1423 aa13.03□□□□□ -0.32
PPME1-205ENST00000539021 CSRNP3Q8WYN3 585 aa13.02□□□□□ -0.33
PPME1-205ENST00000539021 TOP2AP11388 1531 aaKnown RBP13.01□□□□□ -0.33
PPME1-205ENST00000539021 EEA1Q15075 1411 aa12.98□□□□□ -0.33
PPME1-205ENST00000539021 HNRNPUL2Q1KMD3 747 aaKnown RBP12.98□□□□□ -0.33
PPME1-205ENST00000539021 SMARCA2P51531 1590 aa12.95□□□□□ -0.34
PPME1-205ENST00000539021 GOLGA3Q08378 1498 aa12.94□□□□□ -0.34
PPME1-205ENST00000539021 MIER1Q8N108 512 aa12.93□□□□□ -0.34
PPME1-205ENST00000539021 RUSC2Q8N2Y8 1516 aa12.93□□□□□ -0.34
PPME1-205ENST00000539021 SMARCA4P51532 1647 aa12.93□□□□□ -0.34
PPME1-205ENST00000539021 APLP2Q06481 763 aa12.91□□□□□ -0.34
PPME1-205ENST00000539021 CLIP1P30622 1438 aa12.84□□□□□ -0.35
PPME1-205ENST00000539021 RANGAP1P46060 587 aaPredicted RBP12.83□□□□□ -0.36
PPME1-205ENST00000539021 CEP164Q9UPV0 1460 aa12.83□□□□□ -0.36
PPME1-205ENST00000539021 VPS8Q8N3P4 1428 aa12.78□□□□□ -0.36
PPME1-205ENST00000539021 KIF21BO75037 1637 aa12.75□□□□□ -0.37
PPME1-205ENST00000539021 PABPN1Q86U42 306 aaKnown RBP eCLIP12.72□□□□□ -0.37
PPME1-205ENST00000539021 SYNJ1O43426 1573 aa12.71□□□□□ -0.37
PPME1-205ENST00000539021 UNC13AQ9UPW8 1703 aa12.71□□□□□ -0.37
PPME1-205ENST00000539021 BAZ1BQ9UIG0 1483 aaKnown RBP12.69□□□□□ -0.38
PPME1-205ENST00000539021 RAPGEF2Q9Y4G8 1499 aa12.69□□□□□ -0.38
PPME1-205ENST00000539021 CLSPNQ9HAW4 1339 aa12.68□□□□□ -0.38
PPME1-205ENST00000539021 DHX57Q6P158 1386 aaKnown RBP12.64□□□□□ -0.39
PPME1-205ENST00000539021 SUPT16HQ9Y5B9 1047 aaKnown RBP12.63□□□□□ -0.39
PPME1-205ENST00000539021 PEG3Q9GZU2 1588 aa12.58□□□□□ -0.4
PPME1-205ENST00000539021 ITGAEP38570 1179 aa12.56□□□□□ -0.4
PPME1-205ENST00000539021 KANK4Q5T7N3 995 aaPredicted RBP12.56□□□□□ -0.4
PPME1-205ENST00000539021 ATAD2BQ9ULI0 1458 aa12.54□□□□□ -0.4
PPME1-205ENST00000539021 BICRAQ9NZM4 1560 aa12.54□□□□□ -0.4
PPME1-205ENST00000539021 ARAP1Q96P48 1450 aa12.52□□□□□ -0.41
PPME1-205ENST00000539021 TOP2BQ02880 1626 aa12.51□□□□□ -0.41
PPME1-205ENST00000539021 ERICH3Q5RHP9 1530 aa12.5□□□□□ -0.41
PPME1-205ENST00000539021 TSHZ2Q9NRE2 1034 aa12.49□□□□□ -0.41
PPME1-205ENST00000539021 CCNB3Q8WWL7 1395 aa12.49□□□□□ -0.41
PPME1-205ENST00000539021 RRBP1Q9P2E9 1410 aaKnown RBP12.48□□□□□ -0.41
PPME1-205ENST00000539021 PRXQ9BXM0 1461 aa12.47□□□□□ -0.41
PPME1-205ENST00000539021 BCANQ96GW7 911 aa12.47□□□□□ -0.41
PPME1-205ENST00000539021 KCNH8Q96L42 1107 aa12.44□□□□□ -0.42
PPME1-205ENST00000539021 BIVM-ERCC5R4GMW8 1640 aa12.43□□□□□ -0.42
PPME1-205ENST00000539021 KIF27Q86VH2 1401 aa12.43□□□□□ -0.42
PPME1-205ENST00000539021 ANP32EQ9BTT0 268 aa12.43□□□□□ -0.42
PPME1-205ENST00000539021 RAB3GAP2Q9H2M9 1393 aa12.42□□□□□ -0.42
PPME1-205ENST00000539021 CUX2O14529 1486 aa12.41□□□□□ -0.42
PPME1-205ENST00000539021 FKBP8Q14318 412 aa12.41□□□□□ -0.42
PPME1-205ENST00000539021 NEFLP07196 543 aa12.41□□□□□ -0.42
PPME1-205ENST00000539021 DDX10Q13206 875 aaKnown RBP12.41□□□□□ -0.42
PPME1-205ENST00000539021 ARHGAP35Q9NRY4 1499 aa12.38□□□□□ -0.43
PPME1-205ENST00000539021 FAM50AQ14320 339 aaKnown RBP12.37□□□□□ -0.43
PPME1-205ENST00000539021 CUX1P39880 1505 aa12.35□□□□□ -0.43
PPME1-205ENST00000539021 SETD5Q9C0A6 1442 aa12.35□□□□□ -0.43
PPME1-205ENST00000539021 SIN3AQ96ST3 1273 aa12.34□□□□□ -0.43
PPME1-205ENST00000539021 MAPKBP1O60336 1514 aa12.34□□□□□ -0.43
PPME1-205ENST00000539021 ATP1B4Q9UN42 357 aaPredicted RBP12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms