RNA–Protein interactions for RNA: ENST00000535304.1

C2CD5-204, Transcript of C2 calcium dependent domain containing 5, humanhuman

TSL 3

Gene C2CD5, Length 767 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD5-204ENST00000535304 AEBP2Q6ZN18 517 aaPredicted RBP29.76■■■□□ 2.35
C2CD5-204ENST00000535304 CHIC1Q5VXU3 224 aa27.76■■■□□ 2.03
C2CD5-204ENST00000535304 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
C2CD5-204ENST00000535304 PHF23Q9BUL5 403 aaPredicted RBP25.04■■□□□ 1.6
C2CD5-204ENST00000535304 FOXD1Q16676 465 aa23.79■■□□□ 1.4
C2CD5-204ENST00000535304 POTEDQ86YR6 584 aa22.8■■□□□ 1.24
C2CD5-204ENST00000535304 MSH5O43196 834 aa22.45■■□□□ 1.18
C2CD5-204ENST00000535304 PIAS4Q8N2W9 510 aaPredicted RBP22.06■■□□□ 1.12
C2CD5-204ENST00000535304 PLPPR3Q6T4P5 718 aa22.01■■□□□ 1.11
C2CD5-204ENST00000535304 PPP6R1Q9UPN7 881 aa21.86■■□□□ 1.09
C2CD5-204ENST00000535304 NISCHQ9Y2I1 1504 aa21.79■■□□□ 1.08
C2CD5-204ENST00000535304 ADRA2BP18089 450 aa21.72■■□□□ 1.07
C2CD5-204ENST00000535304 MAPK8IP2Q13387 824 aaPredicted RBP20.12■□□□□ 0.81
C2CD5-204ENST00000535304 DMRT2Q9Y5R5 561 aa20.12■□□□□ 0.81
C2CD5-204ENST00000535304 SCAF1Q9H7N4 1312 aaKnown RBP19.85■□□□□ 0.77
C2CD5-204ENST00000535304 CACNB1Q02641 598 aaPredicted RBP19.52■□□□□ 0.72
C2CD5-204ENST00000535304 CCDC180Q9P1Z9 1646 aa19.36■□□□□ 0.69
C2CD5-204ENST00000535304 PPP4R3CPQ6ZMV5 832 aa19.29■□□□□ 0.68
C2CD5-204ENST00000535304 DCAF8L1A6NGE4 600 aa19.19■□□□□ 0.66
C2CD5-204ENST00000535304 HOXD11P31277 338 aaPredicted RBP19.19■□□□□ 0.66
C2CD5-204ENST00000535304 RNF39Q9H2S5 420 aa19.12■□□□□ 0.65
C2CD5-204ENST00000535304 ABCC9O60706 1549 aa19.07■□□□□ 0.64
C2CD5-204ENST00000535304 CNKSR2Q8WXI2 1034 aa18.91■□□□□ 0.62
C2CD5-204ENST00000535304 RNF216Q9NWF9 866 aaPredicted RBP18.88■□□□□ 0.61
C2CD5-204ENST00000535304 C1QBPQ07021 282 aaKnown RBP18.81■□□□□ 0.6
C2CD5-204ENST00000535304 DNAJC5BQ9UF47 199 aa18.67■□□□□ 0.58
C2CD5-204ENST00000535304 NCBP3Q53F19 620 aaKnown RBP18.65■□□□□ 0.58
C2CD5-204ENST00000535304 NPM3O75607 178 aaKnown RBP18.3■□□□□ 0.52
C2CD5-204ENST00000535304 DCAF8L2P0C7V8 631 aa18.27■□□□□ 0.52
C2CD5-204ENST00000535304 RB1CC1Q8TDY2 1594 aa18.24■□□□□ 0.51
C2CD5-204ENST00000535304 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.19■□□□□ 0.5
C2CD5-204ENST00000535304 NACADO15069 1562 aa18.18■□□□□ 0.5
C2CD5-204ENST00000535304 ZCCHC6Q5VYS8 1495 aaKnown RBP18.16■□□□□ 0.5
C2CD5-204ENST00000535304 KCNA4P22459 653 aa18.06■□□□□ 0.48
C2CD5-204ENST00000535304 MYO15BQ96JP2 1530 aa18.01■□□□□ 0.47
C2CD5-204ENST00000535304 DCAF1Q9Y4B6 1507 aa17.95■□□□□ 0.46
C2CD5-204ENST00000535304 UNC13AQ9UPW8 1703 aa17.89■□□□□ 0.45
C2CD5-204ENST00000535304 PABPN1Q86U42 306 aaKnown RBP eCLIP17.82■□□□□ 0.44
C2CD5-204ENST00000535304 U3KPZ7 1027 aaPredicted RBP17.82■□□□□ 0.44
C2CD5-204ENST00000535304 SCRIBQ14160 1630 aa17.78■□□□□ 0.44
C2CD5-204ENST00000535304 POTEHQ6S545 545 aa17.75■□□□□ 0.43
C2CD5-204ENST00000535304 BICRAQ9NZM4 1560 aa17.74■□□□□ 0.43
C2CD5-204ENST00000535304 DSG3P32926 999 aa17.73■□□□□ 0.43
C2CD5-204ENST00000535304 SPINK5Q9NQ38 1064 aaPredicted RBP17.7■□□□□ 0.42
C2CD5-204ENST00000535304 CAPN15O75808 1086 aa17.64■□□□□ 0.41
C2CD5-204ENST00000535304 SHROOM4Q9ULL8 1493 aa17.43■□□□□ 0.38
C2CD5-204ENST00000535304 SLC4A2P04920 1241 aa17.42■□□□□ 0.38
C2CD5-204ENST00000535304 EIF4G1Q04637 1599 aaKnown RBP17.27■□□□□ 0.35
C2CD5-204ENST00000535304 TRHP20396 242 aaPredicted RBP17.23■□□□□ 0.35
C2CD5-204ENST00000535304 CC2D2AQ9P2K1 1620 aa17.21■□□□□ 0.35
C2CD5-204ENST00000535304 APLP2Q06481 763 aa17.21■□□□□ 0.35
C2CD5-204ENST00000535304 ZNF219Q9P2Y4 722 aaPredicted RBP17.21■□□□□ 0.35
C2CD5-204ENST00000535304 ABCB7O75027 752 aa17.19■□□□□ 0.34
C2CD5-204ENST00000535304 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.17■□□□□ 0.34
C2CD5-204ENST00000535304 HNRNPUL2Q1KMD3 747 aaKnown RBP17.17■□□□□ 0.34
C2CD5-204ENST00000535304 SLC4A1APQ9BWU0 796 aaKnown RBP17.12■□□□□ 0.33
C2CD5-204ENST00000535304 CECR2Q9BXF3 1484 aa17.1■□□□□ 0.33
C2CD5-204ENST00000535304 SAMD1Q6SPF0 538 aaPredicted RBP17.05■□□□□ 0.32
C2CD5-204ENST00000535304 MYCNP04198 464 aaPredicted RBP16.96■□□□□ 0.31
C2CD5-204ENST00000535304 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
C2CD5-204ENST00000535304 RBM42Q9BTD8 480 aaKnown RBP16.89■□□□□ 0.29
C2CD5-204ENST00000535304 BAZ1AQ9NRL2 1556 aaPredicted RBP16.87■□□□□ 0.29
C2CD5-204ENST00000535304 FOXD4L1Q9NU39 408 aa16.85■□□□□ 0.29
C2CD5-204ENST00000535304 ATAD2BQ9ULI0 1458 aa16.84■□□□□ 0.29
C2CD5-204ENST00000535304 MROH2BQ7Z745 1585 aa16.84■□□□□ 0.29
C2CD5-204ENST00000535304 SMARCA2P51531 1590 aa16.78■□□□□ 0.28
C2CD5-204ENST00000535304 NCAPD3P42695 1498 aa16.78■□□□□ 0.28
C2CD5-204ENST00000535304 CHRDL2Q6WN34 429 aa16.73■□□□□ 0.27
C2CD5-204ENST00000535304 HMGXB3Q12766 1538 aa16.72■□□□□ 0.27
C2CD5-204ENST00000535304 BAZ1BQ9UIG0 1483 aaKnown RBP16.71■□□□□ 0.27
C2CD5-204ENST00000535304 PEG3Q9GZU2 1588 aa16.71■□□□□ 0.27
C2CD5-204ENST00000535304 POLA2Q14181 598 aa16.69■□□□□ 0.26
C2CD5-204ENST00000535304 WIZO95785 1651 aa16.66■□□□□ 0.26
C2CD5-204ENST00000535304 RSF1Q96T23 1441 aaPredicted RBP16.61■□□□□ 0.25
C2CD5-204ENST00000535304 ZBTB22O15209 634 aa16.57■□□□□ 0.24
C2CD5-204ENST00000535304 NESP48681 1621 aa16.51■□□□□ 0.23
C2CD5-204ENST00000535304 ATF5Q9Y2D1 282 aaPredicted RBP16.49■□□□□ 0.23
C2CD5-204ENST00000535304 TOP2AP11388 1531 aaKnown RBP16.45■□□□□ 0.22
C2CD5-204ENST00000535304 AKT1S1Q96B36 256 aa16.42■□□□□ 0.22
C2CD5-204ENST00000535304 ERCC6Q03468 1493 aa16.42■□□□□ 0.22
C2CD5-204ENST00000535304 SP7Q8TDD2 431 aaPredicted RBP16.4■□□□□ 0.22
C2CD5-204ENST00000535304 LAMC3Q9Y6N6 1575 aa16.35■□□□□ 0.21
C2CD5-204ENST00000535304 ATXN8OSP0DMR3 200 aa16.33■□□□□ 0.2
C2CD5-204ENST00000535304 CADPSQ9ULU8 1353 aa16.31■□□□□ 0.2
C2CD5-204ENST00000535304 ZBTB12Q9Y330 459 aaPredicted RBP16.3■□□□□ 0.2
C2CD5-204ENST00000535304 KIF21AQ7Z4S6 1674 aa16.3■□□□□ 0.2
C2CD5-204ENST00000535304 REM2Q8IYK8 340 aaPredicted RBP16.26■□□□□ 0.19
C2CD5-204ENST00000535304 CCDC88BA6NC98 1476 aa16.26■□□□□ 0.19
C2CD5-204ENST00000535304 PIP4P2Q8N4L2 257 aa16.24■□□□□ 0.19
C2CD5-204ENST00000535304 PDS5BQ9NTI5 1447 aa16.24■□□□□ 0.19
C2CD5-204ENST00000535304 THOC2Q8NI27 1593 aaKnown RBP16.23■□□□□ 0.19
C2CD5-204ENST00000535304 SUPT5HO00267 1087 aaKnown RBP16.22■□□□□ 0.19
C2CD5-204ENST00000535304 CFTRP13569 1480 aa16.22■□□□□ 0.19
C2CD5-204ENST00000535304 CUX2O14529 1486 aa16.18■□□□□ 0.18
C2CD5-204ENST00000535304 OSCARQ8IYS5 282 aa16.17■□□□□ 0.18
C2CD5-204ENST00000535304 FANCD2Q9BXW9 1451 aa16.16■□□□□ 0.18
C2CD5-204ENST00000535304 CEP164Q9UPV0 1460 aa16.14■□□□□ 0.17
C2CD5-204ENST00000535304 MRC2Q9UBG0 1479 aa16.12■□□□□ 0.17
C2CD5-204ENST00000535304 PITPNM1O00562 1244 aa16.1■□□□□ 0.17
C2CD5-204ENST00000535304 FXR2P51116 673 aaKnown RBP eCLIP16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms