RNA–Protein interactions for RNA: ENST00000534663.1

RAG1-203, Transcript of recombination activating 1, humanhuman

TSL 1 (best)

Gene RAG1, Length 3,707 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-203ENST00000534663 NISCHQ9Y2I1 1504 aa13.04□□□□□ -0.32
RAG1-203ENST00000534663 SHROOM4Q9ULL8 1493 aa11.89□□□□□ -0.51
RAG1-203ENST00000534663 SUPT5HO00267 1087 aaKnown RBP11.81□□□□□ -0.52
RAG1-203ENST00000534663 DCAF8L2P0C7V8 631 aa11.6□□□□□ -0.55
RAG1-203ENST00000534663 PCGF6Q9BYE7 350 aa11.39□□□□□ -0.59
RAG1-203ENST00000534663 HRCP23327 699 aa11.27□□□□□ -0.61
RAG1-203ENST00000534663 CHIC1Q5VXU3 224 aa11.26□□□□□ -0.61
RAG1-203ENST00000534663 PPARGC1BQ86YN6 1023 aaKnown RBP11.25□□□□□ -0.61
RAG1-203ENST00000534663 CCDC180Q9P1Z9 1646 aa11.23□□□□□ -0.61
RAG1-203ENST00000534663 MYO15BQ96JP2 1530 aa11.15□□□□□ -0.62
RAG1-203ENST00000534663 LOC105371045A0A1W2PR82 267 aa11.15□□□□□ -0.62
RAG1-203ENST00000534663 EHMT2Q96KQ7 1210 aa11.12□□□□□ -0.63
RAG1-203ENST00000534663 FAM9AQ8IZU1 332 aaPredicted RBP11□□□□□ -0.65
RAG1-203ENST00000534663 ZCCHC6Q5VYS8 1495 aaKnown RBP11□□□□□ -0.65
RAG1-203ENST00000534663 TRIM26Q12899 539 aaPredicted RBP10.89□□□□□ -0.67
RAG1-203ENST00000534663 TRIM41Q8WV44 630 aa10.84□□□□□ -0.67
RAG1-203ENST00000534663 ABCC9O60706 1549 aa10.81□□□□□ -0.68
RAG1-203ENST00000534663 TTBK1Q5TCY1 1321 aaPredicted RBP10.77□□□□□ -0.69
RAG1-203ENST00000534663 DCAF1Q9Y4B6 1507 aa10.75□□□□□ -0.69
RAG1-203ENST00000534663 ZEB1P37275 1124 aaPredicted RBP10.7□□□□□ -0.7
RAG1-203ENST00000534663 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.63□□□□□ -0.71
RAG1-203ENST00000534663 CCER1Q8TC90 406 aaPredicted RBP10.63□□□□□ -0.71
RAG1-203ENST00000534663 SCAF1Q9H7N4 1312 aaKnown RBP10.59□□□□□ -0.71
RAG1-203ENST00000534663 SCRIBQ14160 1630 aa10.52□□□□□ -0.73
RAG1-203ENST00000534663 PELP1Q8IZL8 1130 aaKnown RBP10.51□□□□□ -0.73
RAG1-203ENST00000534663 RSF1Q96T23 1441 aaPredicted RBP10.5□□□□□ -0.73
RAG1-203ENST00000534663 NACADO15069 1562 aa10.49□□□□□ -0.73
RAG1-203ENST00000534663 RB1CC1Q8TDY2 1594 aa10.48□□□□□ -0.73
RAG1-203ENST00000534663 YTHDC1Q96MU7 727 aaKnown RBP10.47□□□□□ -0.73
RAG1-203ENST00000534663 DIEXFQ68CQ4 756 aaKnown RBP10.44□□□□□ -0.74
RAG1-203ENST00000534663 NEUROD1Q13562 356 aa10.43□□□□□ -0.74
RAG1-203ENST00000534663 GTF3C3Q9Y5Q9 886 aa10.42□□□□□ -0.74
RAG1-203ENST00000534663 CENPBP07199 599 aaPredicted RBP10.41□□□□□ -0.74
RAG1-203ENST00000534663 RANGAP1P46060 587 aaPredicted RBP10.41□□□□□ -0.74
RAG1-203ENST00000534663 UBTFP17480 764 aaKnown RBP10.41□□□□□ -0.74
RAG1-203ENST00000534663 UNC13AQ9UPW8 1703 aa10.4□□□□□ -0.74
RAG1-203ENST00000534663 ACIN1Q9UKV3 1341 aaKnown RBP10.4□□□□□ -0.74
RAG1-203ENST00000534663 CECR2Q9BXF3 1484 aa10.34□□□□□ -0.75
RAG1-203ENST00000534663 HNRNPUL2Q1KMD3 747 aaKnown RBP10.33□□□□□ -0.76
RAG1-203ENST00000534663 BICRAQ9NZM4 1560 aa10.25□□□□□ -0.77
RAG1-203ENST00000534663 MROH2BQ7Z745 1585 aa10.24□□□□□ -0.77
RAG1-203ENST00000534663 APLP2Q06481 763 aa10.24□□□□□ -0.77
RAG1-203ENST00000534663 ZNF316A6NFI3 1004 aaPredicted RBP10.22□□□□□ -0.77
RAG1-203ENST00000534663 WIZO95785 1651 aa10.19□□□□□ -0.78
RAG1-203ENST00000534663 CSRNP3Q8WYN3 585 aa10.18□□□□□ -0.78
RAG1-203ENST00000534663 MIER1Q8N108 512 aa10.17□□□□□ -0.78
RAG1-203ENST00000534663 CEP162Q5TB80 1403 aa10.16□□□□□ -0.78
RAG1-203ENST00000534663 ABCC8Q09428 1581 aa10.16□□□□□ -0.78
RAG1-203ENST00000534663 PABPN1Q86U42 306 aaKnown RBP eCLIP10.15□□□□□ -0.78
RAG1-203ENST00000534663 SOGA1O94964 1423 aa10.15□□□□□ -0.79
RAG1-203ENST00000534663 CCDC88BA6NC98 1476 aa10.14□□□□□ -0.79
RAG1-203ENST00000534663 ITGAEP38570 1179 aa10.1□□□□□ -0.79
RAG1-203ENST00000534663 RUSC2Q8N2Y8 1516 aa10.07□□□□□ -0.8
RAG1-203ENST00000534663 TNIKQ9UKE5 1360 aa10.04□□□□□ -0.8
RAG1-203ENST00000534663 BAZ1AQ9NRL2 1556 aaPredicted RBP10□□□□□ -0.81
RAG1-203ENST00000534663 MYT1Q01538 1121 aa9.99□□□□□ -0.81
RAG1-203ENST00000534663 WRNQ14191 1432 aaPredicted RBP eCLIP9.98□□□□□ -0.81
RAG1-203ENST00000534663 DNAJC5BQ9UF47 199 aa9.97□□□□□ -0.81
RAG1-203ENST00000534663 CLIP1P30622 1438 aa9.97□□□□□ -0.81
RAG1-203ENST00000534663 BCANQ96GW7 911 aa9.97□□□□□ -0.81
RAG1-203ENST00000534663 GOLGA3Q08378 1498 aa9.97□□□□□ -0.81
RAG1-203ENST00000534663 ATP1B4Q9UN42 357 aaPredicted RBP9.95□□□□□ -0.82
RAG1-203ENST00000534663 EIF4G1Q04637 1599 aaKnown RBP9.92□□□□□ -0.82
RAG1-203ENST00000534663 TOP2AP11388 1531 aaKnown RBP9.91□□□□□ -0.82
RAG1-203ENST00000534663 EEA1Q15075 1411 aa9.91□□□□□ -0.82
RAG1-203ENST00000534663 SMARCA2P51531 1590 aa9.89□□□□□ -0.83
RAG1-203ENST00000534663 CC2D2AQ9P2K1 1620 aa9.89□□□□□ -0.83
RAG1-203ENST00000534663 SUPT16HQ9Y5B9 1047 aaKnown RBP9.87□□□□□ -0.83
RAG1-203ENST00000534663 CEP164Q9UPV0 1460 aa9.87□□□□□ -0.83
RAG1-203ENST00000534663 KANK4Q5T7N3 995 aaPredicted RBP9.86□□□□□ -0.83
RAG1-203ENST00000534663 SMARCA4P51532 1647 aa9.86□□□□□ -0.83
RAG1-203ENST00000534663 HIRIP3Q9BW71 556 aaPredicted RBP9.86□□□□□ -0.83
RAG1-203ENST00000534663 VPS8Q8N3P4 1428 aa9.85□□□□□ -0.83
RAG1-203ENST00000534663 KCNH8Q96L42 1107 aa9.84□□□□□ -0.83
RAG1-203ENST00000534663 RAPGEF2Q9Y4G8 1499 aa9.84□□□□□ -0.83
RAG1-203ENST00000534663 FAM50AQ14320 339 aaKnown RBP9.83□□□□□ -0.84
RAG1-203ENST00000534663 DDX10Q13206 875 aaKnown RBP9.83□□□□□ -0.84
RAG1-203ENST00000534663 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
RAG1-203ENST00000534663 FKBP8Q14318 412 aa9.8□□□□□ -0.84
RAG1-203ENST00000534663 NEFLP07196 543 aa9.79□□□□□ -0.84
RAG1-203ENST00000534663 TRIM52Q96A61 297 aa9.79□□□□□ -0.84
RAG1-203ENST00000534663 DHX57Q6P158 1386 aaKnown RBP9.78□□□□□ -0.84
RAG1-203ENST00000534663 SIN3AQ96ST3 1273 aa9.77□□□□□ -0.85
RAG1-203ENST00000534663 SYNJ1O43426 1573 aa9.76□□□□□ -0.85
RAG1-203ENST00000534663 TSHZ2Q9NRE2 1034 aa9.74□□□□□ -0.85
RAG1-203ENST00000534663 BAZ1BQ9UIG0 1483 aaKnown RBP9.73□□□□□ -0.85
RAG1-203ENST00000534663 KIF21BO75037 1637 aa9.72□□□□□ -0.85
RAG1-203ENST00000534663 PEG3Q9GZU2 1588 aa9.71□□□□□ -0.86
RAG1-203ENST00000534663 CNGB1Q14028 1251 aaPredicted RBP9.7□□□□□ -0.86
RAG1-203ENST00000534663 CLSPNQ9HAW4 1339 aa9.7□□□□□ -0.86
RAG1-203ENST00000534663 CCNB3Q8WWL7 1395 aa9.69□□□□□ -0.86
RAG1-203ENST00000534663 ANP32CO43423 234 aa9.68□□□□□ -0.86
RAG1-203ENST00000534663 IRX6P78412 446 aaPredicted RBP9.68□□□□□ -0.86
RAG1-203ENST00000534663 ANP32EQ9BTT0 268 aa9.67□□□□□ -0.86
RAG1-203ENST00000534663 RAB3GAP2Q9H2M9 1393 aa9.66□□□□□ -0.86
RAG1-203ENST00000534663 HMGXB3Q12766 1538 aa9.66□□□□□ -0.86
RAG1-203ENST00000534663 NCAPD3P42695 1498 aa9.65□□□□□ -0.86
RAG1-203ENST00000534663 ATAD2BQ9ULI0 1458 aa9.65□□□□□ -0.86
RAG1-203ENST00000534663 ERICH6Q7L0X2 663 aa9.64□□□□□ -0.87
RAG1-203ENST00000534663 ARAP1Q96P48 1450 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms