RNA–Protein interactions for RNA: ENST00000533416.1

CRTAM-202, Transcript of cytotoxic and regulatory T cell molecule, humanhuman

TSL 5

Gene CRTAM, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTAM-202ENST00000533416 CHIC1Q5VXU3 224 aa27.01■■□□□ 1.91
CRTAM-202ENST00000533416 AEBP2Q6ZN18 517 aaPredicted RBP26.97■■□□□ 1.91
CRTAM-202ENST00000533416 PHF23Q9BUL5 403 aaPredicted RBP23.72■■□□□ 1.39
CRTAM-202ENST00000533416 SENP3Q9H4L4 574 aaPredicted RBP22.96■■□□□ 1.27
CRTAM-202ENST00000533416 PLPPR3Q6T4P5 718 aa22.27■■□□□ 1.16
CRTAM-202ENST00000533416 NISCHQ9Y2I1 1504 aa21.92■■□□□ 1.1
CRTAM-202ENST00000533416 FOXD1Q16676 465 aa21.14■□□□□ 0.97
CRTAM-202ENST00000533416 ADRA2BP18089 450 aa20.8■□□□□ 0.92
CRTAM-202ENST00000533416 PPP6R1Q9UPN7 881 aa20.73■□□□□ 0.91
CRTAM-202ENST00000533416 PIAS4Q8N2W9 510 aaPredicted RBP20.15■□□□□ 0.82
CRTAM-202ENST00000533416 KCNA4P22459 653 aa19.81■□□□□ 0.76
CRTAM-202ENST00000533416 ABCC9O60706 1549 aa19.67■□□□□ 0.74
CRTAM-202ENST00000533416 PPP4R3CPQ6ZMV5 832 aa19.64■□□□□ 0.73
CRTAM-202ENST00000533416 CCDC180Q9P1Z9 1646 aa19.62■□□□□ 0.73
CRTAM-202ENST00000533416 NCBP3Q53F19 620 aaKnown RBP19.42■□□□□ 0.7
CRTAM-202ENST00000533416 MSH5O43196 834 aa19.39■□□□□ 0.69
CRTAM-202ENST00000533416 SCAF1Q9H7N4 1312 aaKnown RBP19.22■□□□□ 0.67
CRTAM-202ENST00000533416 EHMT2Q96KQ7 1210 aa19.14■□□□□ 0.65
CRTAM-202ENST00000533416 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
CRTAM-202ENST00000533416 CNKSR2Q8WXI2 1034 aa19.01■□□□□ 0.63
CRTAM-202ENST00000533416 NPM3O75607 178 aaKnown RBP18.99■□□□□ 0.63
CRTAM-202ENST00000533416 RB1CC1Q8TDY2 1594 aa18.72■□□□□ 0.59
CRTAM-202ENST00000533416 DCAF8L2P0C7V8 631 aa18.69■□□□□ 0.58
CRTAM-202ENST00000533416 MAPK8IP2Q13387 824 aaPredicted RBP18.67■□□□□ 0.58
CRTAM-202ENST00000533416 CSRNP3Q8WYN3 585 aa18.59■□□□□ 0.57
CRTAM-202ENST00000533416 NACADO15069 1562 aa18.59■□□□□ 0.57
CRTAM-202ENST00000533416 RNF216Q9NWF9 866 aaPredicted RBP18.48■□□□□ 0.55
CRTAM-202ENST00000533416 DNAJC5BQ9UF47 199 aa18.38■□□□□ 0.53
CRTAM-202ENST00000533416 PABPN1Q86U42 306 aaKnown RBP eCLIP18.37■□□□□ 0.53
CRTAM-202ENST00000533416 DMRT2Q9Y5R5 561 aa18.37■□□□□ 0.53
CRTAM-202ENST00000533416 MYO15BQ96JP2 1530 aa18.29■□□□□ 0.52
CRTAM-202ENST00000533416 HOXD11P31277 338 aaPredicted RBP18.21■□□□□ 0.51
CRTAM-202ENST00000533416 UNC13AQ9UPW8 1703 aa18.2■□□□□ 0.5
CRTAM-202ENST00000533416 ZBTB22O15209 634 aa18.17■□□□□ 0.5
CRTAM-202ENST00000533416 ZCCHC6Q5VYS8 1495 aaKnown RBP18.15■□□□□ 0.5
CRTAM-202ENST00000533416 FOXD4L1Q9NU39 408 aa18.14■□□□□ 0.49
CRTAM-202ENST00000533416 BICRAQ9NZM4 1560 aa18.1■□□□□ 0.49
CRTAM-202ENST00000533416 DCAF1Q9Y4B6 1507 aa18.08■□□□□ 0.48
CRTAM-202ENST00000533416 SCRIBQ14160 1630 aa17.94■□□□□ 0.46
CRTAM-202ENST00000533416 SHROOM4Q9ULL8 1493 aa17.89■□□□□ 0.45
CRTAM-202ENST00000533416 SLC4A2P04920 1241 aa17.74■□□□□ 0.43
CRTAM-202ENST00000533416 CC2D2AQ9P2K1 1620 aa17.73■□□□□ 0.43
CRTAM-202ENST00000533416 CECR2Q9BXF3 1484 aa17.72■□□□□ 0.43
CRTAM-202ENST00000533416 EIF4G1Q04637 1599 aaKnown RBP17.7■□□□□ 0.42
CRTAM-202ENST00000533416 DCAF8L1A6NGE4 600 aa17.63■□□□□ 0.41
CRTAM-202ENST00000533416 MYCNP04198 464 aaPredicted RBP17.61■□□□□ 0.41
CRTAM-202ENST00000533416 ATXN8OSP0DMR3 200 aa17.48■□□□□ 0.39
CRTAM-202ENST00000533416 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.45■□□□□ 0.38
CRTAM-202ENST00000533416 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.28■□□□□ 0.36
CRTAM-202ENST00000533416 HNRNPUL2Q1KMD3 747 aaKnown RBP17.28■□□□□ 0.36
CRTAM-202ENST00000533416 SAMD1Q6SPF0 538 aaPredicted RBP17.21■□□□□ 0.35
CRTAM-202ENST00000533416 NCAPD3P42695 1498 aa17.15■□□□□ 0.34
CRTAM-202ENST00000533416 U3KPZ7 1027 aaPredicted RBP17.12■□□□□ 0.33
CRTAM-202ENST00000533416 ATAD2BQ9ULI0 1458 aa17.11■□□□□ 0.33
CRTAM-202ENST00000533416 SMARCA4P51532 1647 aa17.08■□□□□ 0.32
CRTAM-202ENST00000533416 SMARCA2P51531 1590 aa17.08■□□□□ 0.32
CRTAM-202ENST00000533416 ERCC6Q03468 1493 aa17.04■□□□□ 0.32
CRTAM-202ENST00000533416 BAZ1AQ9NRL2 1556 aaPredicted RBP17.03■□□□□ 0.32
CRTAM-202ENST00000533416 HMGXB3Q12766 1538 aa17.01■□□□□ 0.31
CRTAM-202ENST00000533416 APLP2Q06481 763 aa17■□□□□ 0.31
CRTAM-202ENST00000533416 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
CRTAM-202ENST00000533416 ATF5Q9Y2D1 282 aaPredicted RBP16.95■□□□□ 0.3
CRTAM-202ENST00000533416 CUX2O14529 1486 aa16.92■□□□□ 0.3
CRTAM-202ENST00000533416 MROH2BQ7Z745 1585 aa16.89■□□□□ 0.3
CRTAM-202ENST00000533416 DNAJC5Q9H3Z4 198 aa16.89■□□□□ 0.29
CRTAM-202ENST00000533416 PEG3Q9GZU2 1588 aa16.88■□□□□ 0.29
CRTAM-202ENST00000533416 NESP48681 1621 aa16.88■□□□□ 0.29
CRTAM-202ENST00000533416 FKBP8Q14318 412 aa16.85■□□□□ 0.29
CRTAM-202ENST00000533416 LAMC3Q9Y6N6 1575 aa16.77■□□□□ 0.27
CRTAM-202ENST00000533416 ZNF219Q9P2Y4 722 aaPredicted RBP16.74■□□□□ 0.27
CRTAM-202ENST00000533416 PDS5BQ9NTI5 1447 aa16.72■□□□□ 0.27
CRTAM-202ENST00000533416 WIZO95785 1651 aa16.69■□□□□ 0.26
CRTAM-202ENST00000533416 CADPSQ9ULU8 1353 aa16.66■□□□□ 0.26
CRTAM-202ENST00000533416 THOC2Q8NI27 1593 aaKnown RBP16.65■□□□□ 0.26
CRTAM-202ENST00000533416 KIF21AQ7Z4S6 1674 aa16.63■□□□□ 0.25
CRTAM-202ENST00000533416 RNF39Q9H2S5 420 aa16.59■□□□□ 0.25
CRTAM-202ENST00000533416 RSF1Q96T23 1441 aaPredicted RBP16.57■□□□□ 0.24
CRTAM-202ENST00000533416 MRC2Q9UBG0 1479 aa16.54■□□□□ 0.24
CRTAM-202ENST00000533416 POTEDQ86YR6 584 aa16.52■□□□□ 0.24
CRTAM-202ENST00000533416 TRHP20396 242 aaPredicted RBP16.51■□□□□ 0.23
CRTAM-202ENST00000533416 CEP164Q9UPV0 1460 aa16.5■□□□□ 0.23
CRTAM-202ENST00000533416 TOP2AP11388 1531 aaKnown RBP16.5■□□□□ 0.23
CRTAM-202ENST00000533416 C1QBPQ07021 282 aaKnown RBP16.49■□□□□ 0.23
CRTAM-202ENST00000533416 FANCD2Q9BXW9 1451 aa16.48■□□□□ 0.23
CRTAM-202ENST00000533416 CAPN15O75808 1086 aa16.47■□□□□ 0.23
CRTAM-202ENST00000533416 WDR62O43379 1518 aa16.45■□□□□ 0.22
CRTAM-202ENST00000533416 SPINK5Q9NQ38 1064 aaPredicted RBP16.45■□□□□ 0.22
CRTAM-202ENST00000533416 CFTRP13569 1480 aa16.45■□□□□ 0.22
CRTAM-202ENST00000533416 AMER1Q5JTC6 1135 aaPredicted RBP16.44■□□□□ 0.22
CRTAM-202ENST00000533416 FBLN2P98095 1184 aa16.41■□□□□ 0.22
CRTAM-202ENST00000533416 POLA2Q14181 598 aa16.36■□□□□ 0.21
CRTAM-202ENST00000533416 CCDC88BA6NC98 1476 aa16.32■□□□□ 0.2
CRTAM-202ENST00000533416 URB2Q14146 1524 aaKnown RBP16.3■□□□□ 0.2
CRTAM-202ENST00000533416 SPDYE4A6NLX3 237 aa16.3■□□□□ 0.2
CRTAM-202ENST00000533416 RTN4Q9NQC3 1192 aaKnown RBP16.29■□□□□ 0.2
CRTAM-202ENST00000533416 TRIM41Q8WV44 630 aa16.27■□□□□ 0.2
CRTAM-202ENST00000533416 MKRN4PQ13434 485 aaPredicted RBP16.26■□□□□ 0.19
CRTAM-202ENST00000533416 ZBTB12Q9Y330 459 aaPredicted RBP16.25■□□□□ 0.19
CRTAM-202ENST00000533416 PRDM2Q13029 1718 aa16.25■□□□□ 0.19
CRTAM-202ENST00000533416 OSCARQ8IYS5 282 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms