RNA–Protein interactions for RNA: ENST00000533291.5

GRIK4-207, Transcript of glutamate ionotropic receptor kainate type subunit 4, humanhuman

TSL 1 (best)

Gene GRIK4, Length 2,961 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIK4-207ENST00000533291 NISCHQ9Y2I1 1504 aa27.63■■■□□ 2.01
GRIK4-207ENST00000533291 SHROOM4Q9ULL8 1493 aa24.84■■□□□ 1.57
GRIK4-207ENST00000533291 SUPT5HO00267 1087 aaKnown RBP24.53■■□□□ 1.52
GRIK4-207ENST00000533291 DCAF8L2P0C7V8 631 aa24.11■■□□□ 1.45
GRIK4-207ENST00000533291 PCGF6Q9BYE7 350 aa23.55■■□□□ 1.36
GRIK4-207ENST00000533291 CHIC1Q5VXU3 224 aa23.54■■□□□ 1.36
GRIK4-207ENST00000533291 MYO15BQ96JP2 1530 aa23.49■■□□□ 1.35
GRIK4-207ENST00000533291 HRCP23327 699 aa23.34■■□□□ 1.33
GRIK4-207ENST00000533291 PPARGC1BQ86YN6 1023 aaKnown RBP23.34■■□□□ 1.33
GRIK4-207ENST00000533291 ZCCHC6Q5VYS8 1495 aaKnown RBP23.33■■□□□ 1.32
GRIK4-207ENST00000533291 LOC105371045A0A1W2PR82 267 aa23.27■■□□□ 1.32
GRIK4-207ENST00000533291 EHMT2Q96KQ7 1210 aa23.02■■□□□ 1.28
GRIK4-207ENST00000533291 FAM9AQ8IZU1 332 aaPredicted RBP22.83■■□□□ 1.24
GRIK4-207ENST00000533291 CCDC180Q9P1Z9 1646 aa22.83■■□□□ 1.24
GRIK4-207ENST00000533291 TRIM26Q12899 539 aaPredicted RBP22.58■■□□□ 1.2
GRIK4-207ENST00000533291 TRIM41Q8WV44 630 aa22.53■■□□□ 1.2
GRIK4-207ENST00000533291 DCAF1Q9Y4B6 1507 aa22.46■■□□□ 1.19
GRIK4-207ENST00000533291 TTBK1Q5TCY1 1321 aaPredicted RBP22.26■■□□□ 1.15
GRIK4-207ENST00000533291 SCRIBQ14160 1630 aa22.23■■□□□ 1.15
GRIK4-207ENST00000533291 RSF1Q96T23 1441 aaPredicted RBP22.19■■□□□ 1.14
GRIK4-207ENST00000533291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.05■■□□□ 1.12
GRIK4-207ENST00000533291 RB1CC1Q8TDY2 1594 aa22.03■■□□□ 1.12
GRIK4-207ENST00000533291 ABCC9O60706 1549 aa22.02■■□□□ 1.12
GRIK4-207ENST00000533291 ZEB1P37275 1124 aaPredicted RBP22■■□□□ 1.11
GRIK4-207ENST00000533291 SCAF1Q9H7N4 1312 aaKnown RBP21.91■■□□□ 1.1
GRIK4-207ENST00000533291 CECR2Q9BXF3 1484 aa21.91■■□□□ 1.1
GRIK4-207ENST00000533291 CCER1Q8TC90 406 aaPredicted RBP21.9■■□□□ 1.1
GRIK4-207ENST00000533291 MROH2BQ7Z745 1585 aa21.71■■□□□ 1.07
GRIK4-207ENST00000533291 WIZO95785 1651 aa21.59■■□□□ 1.05
GRIK4-207ENST00000533291 NEUROD1Q13562 356 aa21.59■■□□□ 1.05
GRIK4-207ENST00000533291 RANGAP1P46060 587 aaPredicted RBP21.57■■□□□ 1.04
GRIK4-207ENST00000533291 UBTFP17480 764 aaKnown RBP21.56■■□□□ 1.04
GRIK4-207ENST00000533291 DIEXFQ68CQ4 756 aaKnown RBP21.53■■□□□ 1.04
GRIK4-207ENST00000533291 YTHDC1Q96MU7 727 aaKnown RBP21.5■■□□□ 1.03
GRIK4-207ENST00000533291 GTF3C3Q9Y5Q9 886 aa21.45■■□□□ 1.02
GRIK4-207ENST00000533291 ACIN1Q9UKV3 1341 aaKnown RBP21.44■■□□□ 1.02
GRIK4-207ENST00000533291 ABCC8Q09428 1581 aa21.44■■□□□ 1.02
GRIK4-207ENST00000533291 HNRNPUL2Q1KMD3 747 aaKnown RBP21.4■■□□□ 1.02
GRIK4-207ENST00000533291 CCDC88BA6NC98 1476 aa21.4■■□□□ 1.02
GRIK4-207ENST00000533291 PABPN1Q86U42 306 aaKnown RBP eCLIP21.37■■□□□ 1.01
GRIK4-207ENST00000533291 SOGA1O94964 1423 aa21.37■■□□□ 1.01
GRIK4-207ENST00000533291 PELP1Q8IZL8 1130 aaKnown RBP21.32■■□□□ 1
GRIK4-207ENST00000533291 CEP162Q5TB80 1403 aa21.28■■□□□ 1
GRIK4-207ENST00000533291 RUSC2Q8N2Y8 1516 aa21.27■■□□□ 1
GRIK4-207ENST00000533291 NACADO15069 1562 aa21.27■■□□□ 1
GRIK4-207ENST00000533291 CENPBP07199 599 aaPredicted RBP21.26■□□□□ 0.99
GRIK4-207ENST00000533291 CSRNP3Q8WYN3 585 aa21.26■□□□□ 0.99
GRIK4-207ENST00000533291 BAZ1AQ9NRL2 1556 aaPredicted RBP21.14■□□□□ 0.97
GRIK4-207ENST00000533291 ZNF316A6NFI3 1004 aaPredicted RBP21.13■□□□□ 0.97
GRIK4-207ENST00000533291 MIER1Q8N108 512 aa21.09■□□□□ 0.97
GRIK4-207ENST00000533291 APLP2Q06481 763 aa21.04■□□□□ 0.96
GRIK4-207ENST00000533291 TNIKQ9UKE5 1360 aa21.04■□□□□ 0.96
GRIK4-207ENST00000533291 EIF4G1Q04637 1599 aaKnown RBP20.99■□□□□ 0.95
GRIK4-207ENST00000533291 TOP2AP11388 1531 aaKnown RBP20.97■□□□□ 0.95
GRIK4-207ENST00000533291 WRNQ14191 1432 aaPredicted RBP eCLIP20.97■□□□□ 0.95
GRIK4-207ENST00000533291 SMARCA2P51531 1590 aa20.96■□□□□ 0.95
GRIK4-207ENST00000533291 SMARCA4P51532 1647 aa20.92■□□□□ 0.94
GRIK4-207ENST00000533291 ITGAEP38570 1179 aa20.88■□□□□ 0.93
GRIK4-207ENST00000533291 GOLGA3Q08378 1498 aa20.86■□□□□ 0.93
GRIK4-207ENST00000533291 CLIP1P30622 1438 aa20.84■□□□□ 0.93
GRIK4-207ENST00000533291 EEA1Q15075 1411 aa20.74■□□□□ 0.91
GRIK4-207ENST00000533291 RAPGEF2Q9Y4G8 1499 aa20.72■□□□□ 0.91
GRIK4-207ENST00000533291 KANK4Q5T7N3 995 aaPredicted RBP20.7■□□□□ 0.9
GRIK4-207ENST00000533291 CEP164Q9UPV0 1460 aa20.67■□□□□ 0.9
GRIK4-207ENST00000533291 SYNJ1O43426 1573 aa20.67■□□□□ 0.9
GRIK4-207ENST00000533291 VPS8Q8N3P4 1428 aa20.63■□□□□ 0.89
GRIK4-207ENST00000533291 UNC13AQ9UPW8 1703 aa20.61■□□□□ 0.89
GRIK4-207ENST00000533291 ATP1B4Q9UN42 357 aaPredicted RBP20.55■□□□□ 0.88
GRIK4-207ENST00000533291 KCNH8Q96L42 1107 aa20.53■□□□□ 0.88
GRIK4-207ENST00000533291 BAZ1BQ9UIG0 1483 aaKnown RBP20.51■□□□□ 0.87
GRIK4-207ENST00000533291 BCANQ96GW7 911 aa20.48■□□□□ 0.87
GRIK4-207ENST00000533291 KIF21BO75037 1637 aa20.48■□□□□ 0.87
GRIK4-207ENST00000533291 HIRIP3Q9BW71 556 aaPredicted RBP20.47■□□□□ 0.87
GRIK4-207ENST00000533291 DHX57Q6P158 1386 aaKnown RBP20.47■□□□□ 0.87
GRIK4-207ENST00000533291 ATAD2BQ9ULI0 1458 aa20.46■□□□□ 0.87
GRIK4-207ENST00000533291 P3H3Q8IVL6 736 aa20.45■□□□□ 0.86
GRIK4-207ENST00000533291 BICRAQ9NZM4 1560 aa20.45■□□□□ 0.86
GRIK4-207ENST00000533291 SUPT16HQ9Y5B9 1047 aaKnown RBP20.41■□□□□ 0.86
GRIK4-207ENST00000533291 FAM50AQ14320 339 aaKnown RBP20.37■□□□□ 0.85
GRIK4-207ENST00000533291 SIN3AQ96ST3 1273 aa20.34■□□□□ 0.85
GRIK4-207ENST00000533291 DDX10Q13206 875 aaKnown RBP20.34■□□□□ 0.85
GRIK4-207ENST00000533291 ARAP1Q96P48 1450 aa20.32■□□□□ 0.84
GRIK4-207ENST00000533291 CCNB3Q8WWL7 1395 aa20.24■□□□□ 0.83
GRIK4-207ENST00000533291 TRIM52Q96A61 297 aa20.21■□□□□ 0.83
GRIK4-207ENST00000533291 RAB3GAP2Q9H2M9 1393 aa20.2■□□□□ 0.82
GRIK4-207ENST00000533291 PRXQ9BXM0 1461 aa20.18■□□□□ 0.82
GRIK4-207ENST00000533291 PEG3Q9GZU2 1588 aa20.18■□□□□ 0.82
GRIK4-207ENST00000533291 FKBP8Q14318 412 aa20.18■□□□□ 0.82
GRIK4-207ENST00000533291 CLSPNQ9HAW4 1339 aa20.17■□□□□ 0.82
GRIK4-207ENST00000533291 KIF27Q86VH2 1401 aa20.17■□□□□ 0.82
GRIK4-207ENST00000533291 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
GRIK4-207ENST00000533291 MYT1Q01538 1121 aa20.16■□□□□ 0.82
GRIK4-207ENST00000533291 TSHZ2Q9NRE2 1034 aa20.15■□□□□ 0.82
GRIK4-207ENST00000533291 ARHGAP35Q9NRY4 1499 aa20.11■□□□□ 0.81
GRIK4-207ENST00000533291 CUX1P39880 1505 aa20.11■□□□□ 0.81
GRIK4-207ENST00000533291 RRBP1Q9P2E9 1410 aaKnown RBP20.08■□□□□ 0.8
GRIK4-207ENST00000533291 CUX2O14529 1486 aa20.06■□□□□ 0.8
GRIK4-207ENST00000533291 PHLDB1Q86UU1 1377 aa20.03■□□□□ 0.8
GRIK4-207ENST00000533291 ERICH3Q5RHP9 1530 aa20■□□□□ 0.79
GRIK4-207ENST00000533291 IGF1RP08069 1367 aa20■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms