RNA–Protein interactions for RNA: ENST00000531708.1

AP001258.1-202, humanhuman

TSL 5

Gene AP001258.1, Length 880 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001258.1-202ENST00000531708 AEBP2Q6ZN18 517 aaPredicted RBP34.5■■■■□ 3.11
AP001258.1-202ENST00000531708 CHIC1Q5VXU3 224 aa33.35■■■□□ 2.93
AP001258.1-202ENST00000531708 PHF23Q9BUL5 403 aaPredicted RBP29.43■■■□□ 2.3
AP001258.1-202ENST00000531708 SENP3Q9H4L4 574 aaPredicted RBP29.11■■■□□ 2.25
AP001258.1-202ENST00000531708 FOXD1Q16676 465 aa27.17■■□□□ 1.94
AP001258.1-202ENST00000531708 PLPPR3Q6T4P5 718 aa26.91■■□□□ 1.9
AP001258.1-202ENST00000531708 PPP6R1Q9UPN7 881 aa26.04■■□□□ 1.76
AP001258.1-202ENST00000531708 ADRA2BP18089 450 aa25.95■■□□□ 1.74
AP001258.1-202ENST00000531708 PIAS4Q8N2W9 510 aaPredicted RBP25.5■■□□□ 1.67
AP001258.1-202ENST00000531708 NISCHQ9Y2I1 1504 aa25.35■■□□□ 1.65
AP001258.1-202ENST00000531708 MSH5O43196 834 aa25■■□□□ 1.59
AP001258.1-202ENST00000531708 PPP4R3CPQ6ZMV5 832 aa23.74■■□□□ 1.39
AP001258.1-202ENST00000531708 MAPK8IP2Q13387 824 aaPredicted RBP23.64■■□□□ 1.37
AP001258.1-202ENST00000531708 SCAF1Q9H7N4 1312 aaKnown RBP23.51■■□□□ 1.35
AP001258.1-202ENST00000531708 POTEDQ86YR6 584 aa23.27■■□□□ 1.32
AP001258.1-202ENST00000531708 DMRT2Q9Y5R5 561 aa23.26■■□□□ 1.31
AP001258.1-202ENST00000531708 CNKSR2Q8WXI2 1034 aa23.07■■□□□ 1.28
AP001258.1-202ENST00000531708 KCNA4P22459 653 aa23.01■■□□□ 1.27
AP001258.1-202ENST00000531708 NCBP3Q53F19 620 aaKnown RBP22.91■■□□□ 1.26
AP001258.1-202ENST00000531708 NPM3O75607 178 aaKnown RBP22.76■■□□□ 1.23
AP001258.1-202ENST00000531708 HOXD11P31277 338 aaPredicted RBP22.7■■□□□ 1.22
AP001258.1-202ENST00000531708 RNF216Q9NWF9 866 aaPredicted RBP22.69■■□□□ 1.22
AP001258.1-202ENST00000531708 CCDC180Q9P1Z9 1646 aa22.46■■□□□ 1.19
AP001258.1-202ENST00000531708 DCAF8L1A6NGE4 600 aa22.2■■□□□ 1.14
AP001258.1-202ENST00000531708 DNAJC5BQ9UF47 199 aa22.08■■□□□ 1.13
AP001258.1-202ENST00000531708 SLC4A1APQ9BWU0 796 aaKnown RBP21.78■■□□□ 1.08
AP001258.1-202ENST00000531708 ABCC9O60706 1549 aa21.72■■□□□ 1.07
AP001258.1-202ENST00000531708 SLC4A2P04920 1241 aa21.6■■□□□ 1.05
AP001258.1-202ENST00000531708 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.55■■□□□ 1.04
AP001258.1-202ENST00000531708 RNF39Q9H2S5 420 aa21.49■■□□□ 1.03
AP001258.1-202ENST00000531708 U3KPZ7 1027 aaPredicted RBP21.31■■□□□ 1
AP001258.1-202ENST00000531708 ZBTB22O15209 634 aa21.26■□□□□ 0.99
AP001258.1-202ENST00000531708 ZCCHC6Q5VYS8 1495 aaKnown RBP21.15■□□□□ 0.98
AP001258.1-202ENST00000531708 FOXD4L1Q9NU39 408 aa21.15■□□□□ 0.98
AP001258.1-202ENST00000531708 C1QBPQ07021 282 aaKnown RBP21.13■□□□□ 0.97
AP001258.1-202ENST00000531708 DCAF8L2P0C7V8 631 aa21.12■□□□□ 0.97
AP001258.1-202ENST00000531708 NACADO15069 1562 aa21.09■□□□□ 0.97
AP001258.1-202ENST00000531708 MYO15BQ96JP2 1530 aa21.05■□□□□ 0.96
AP001258.1-202ENST00000531708 RB1CC1Q8TDY2 1594 aa21.05■□□□□ 0.96
AP001258.1-202ENST00000531708 DCAF1Q9Y4B6 1507 aa21.03■□□□□ 0.96
AP001258.1-202ENST00000531708 CACNB1Q02641 598 aaPredicted RBP21.01■□□□□ 0.95
AP001258.1-202ENST00000531708 EHMT2Q96KQ7 1210 aa20.97■□□□□ 0.95
AP001258.1-202ENST00000531708 MYCNP04198 464 aaPredicted RBP20.95■□□□□ 0.94
AP001258.1-202ENST00000531708 CSRNP3Q8WYN3 585 aa20.87■□□□□ 0.93
AP001258.1-202ENST00000531708 SPINK5Q9NQ38 1064 aaPredicted RBP20.79■□□□□ 0.92
AP001258.1-202ENST00000531708 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.74■□□□□ 0.91
AP001258.1-202ENST00000531708 HNRNPUL2Q1KMD3 747 aaKnown RBP20.74■□□□□ 0.91
AP001258.1-202ENST00000531708 SAMD1Q6SPF0 538 aaPredicted RBP20.71■□□□□ 0.91
AP001258.1-202ENST00000531708 CAPN15O75808 1086 aa20.6■□□□□ 0.89
AP001258.1-202ENST00000531708 ATF5Q9Y2D1 282 aaPredicted RBP20.57■□□□□ 0.88
AP001258.1-202ENST00000531708 APLP2Q06481 763 aa20.53■□□□□ 0.88
AP001258.1-202ENST00000531708 UNC13AQ9UPW8 1703 aa20.5■□□□□ 0.87
AP001258.1-202ENST00000531708 TRHP20396 242 aaPredicted RBP20.47■□□□□ 0.87
AP001258.1-202ENST00000531708 SCRIBQ14160 1630 aa20.45■□□□□ 0.87
AP001258.1-202ENST00000531708 ZNF219Q9P2Y4 722 aaPredicted RBP20.4■□□□□ 0.86
AP001258.1-202ENST00000531708 DSG3P32926 999 aa20.39■□□□□ 0.85
AP001258.1-202ENST00000531708 ATXN8OSP0DMR3 200 aa20.37■□□□□ 0.85
AP001258.1-202ENST00000531708 PABPN1Q86U42 306 aaKnown RBP eCLIP20.34■□□□□ 0.85
AP001258.1-202ENST00000531708 BICRAQ9NZM4 1560 aa20.34■□□□□ 0.85
AP001258.1-202ENST00000531708 ABCB7O75027 752 aa20.28■□□□□ 0.84
AP001258.1-202ENST00000531708 SHROOM4Q9ULL8 1493 aa20.24■□□□□ 0.83
AP001258.1-202ENST00000531708 POLA2Q14181 598 aa20.1■□□□□ 0.81
AP001258.1-202ENST00000531708 EIF4G1Q04637 1599 aaKnown RBP19.81■□□□□ 0.76
AP001258.1-202ENST00000531708 CECR2Q9BXF3 1484 aa19.69■□□□□ 0.74
AP001258.1-202ENST00000531708 CC2D2AQ9P2K1 1620 aa19.67■□□□□ 0.74
AP001258.1-202ENST00000531708 BAZ1AQ9NRL2 1556 aaPredicted RBP19.66■□□□□ 0.74
AP001258.1-202ENST00000531708 MKRN4PQ13434 485 aaPredicted RBP19.65■□□□□ 0.74
AP001258.1-202ENST00000531708 ZBTB12Q9Y330 459 aaPredicted RBP19.63■□□□□ 0.73
AP001258.1-202ENST00000531708 SMARCA4P51532 1647 aa19.62■□□□□ 0.73
AP001258.1-202ENST00000531708 MROH2BQ7Z745 1585 aa19.52■□□□□ 0.71
AP001258.1-202ENST00000531708 OSCARQ8IYS5 282 aa19.49■□□□□ 0.71
AP001258.1-202ENST00000531708 FBLN2P98095 1184 aa19.48■□□□□ 0.71
AP001258.1-202ENST00000531708 SMARCA2P51531 1590 aa19.48■□□□□ 0.71
AP001258.1-202ENST00000531708 ATAD2BQ9ULI0 1458 aa19.46■□□□□ 0.71
AP001258.1-202ENST00000531708 NCAPD3P42695 1498 aa19.44■□□□□ 0.7
AP001258.1-202ENST00000531708 PEG3Q9GZU2 1588 aa19.44■□□□□ 0.7
AP001258.1-202ENST00000531708 RSF1Q96T23 1441 aaPredicted RBP19.4■□□□□ 0.7
AP001258.1-202ENST00000531708 HMGXB3Q12766 1538 aa19.35■□□□□ 0.69
AP001258.1-202ENST00000531708 BAZ1BQ9UIG0 1483 aaKnown RBP19.33■□□□□ 0.68
AP001258.1-202ENST00000531708 WIZO95785 1651 aa19.31■□□□□ 0.68
AP001258.1-202ENST00000531708 RBM42Q9BTD8 480 aaKnown RBP19.28■□□□□ 0.68
AP001258.1-202ENST00000531708 TOP2AP11388 1531 aaKnown RBP19.15■□□□□ 0.66
AP001258.1-202ENST00000531708 SPDYE2BA6NHP3 402 aa19.15■□□□□ 0.66
AP001258.1-202ENST00000531708 SPDYE6P0CI01 402 aa19.15■□□□□ 0.66
AP001258.1-202ENST00000531708 SPDYE2Q495Y8 402 aa19.15■□□□□ 0.66
AP001258.1-202ENST00000531708 SUPT5HO00267 1087 aaKnown RBP19.08■□□□□ 0.64
AP001258.1-202ENST00000531708 SSUH2Q9Y2M2 353 aa19.07■□□□□ 0.64
AP001258.1-202ENST00000531708 AKT1S1Q96B36 256 aa19.05■□□□□ 0.64
AP001258.1-202ENST00000531708 ZNF692Q9BU19 519 aaPredicted RBP19.05■□□□□ 0.64
AP001258.1-202ENST00000531708 SPDYE4A6NLX3 237 aa18.97■□□□□ 0.63
AP001258.1-202ENST00000531708 REM2Q8IYK8 340 aaPredicted RBP18.93■□□□□ 0.62
AP001258.1-202ENST00000531708 CCDC88BA6NC98 1476 aa18.91■□□□□ 0.62
AP001258.1-202ENST00000531708 CADPSQ9ULU8 1353 aa18.9■□□□□ 0.62
AP001258.1-202ENST00000531708 LAMC3Q9Y6N6 1575 aa18.89■□□□□ 0.62
AP001258.1-202ENST00000531708 NESP48681 1621 aa18.84■□□□□ 0.61
AP001258.1-202ENST00000531708 FKBP8Q14318 412 aa18.81■□□□□ 0.6
AP001258.1-202ENST00000531708 CFTRP13569 1480 aa18.81■□□□□ 0.6
AP001258.1-202ENST00000531708 PDS5BQ9NTI5 1447 aa18.78■□□□□ 0.6
AP001258.1-202ENST00000531708 PITPNM1O00562 1244 aa18.76■□□□□ 0.59
AP001258.1-202ENST00000531708 ERCC6Q03468 1493 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms