RNA–Protein interactions for RNA: ENST00000530314.5

COG4-207, Transcript of component of oligomeric golgi complex 4, humanhuman

TSL 1 (best)

Gene COG4, Length 3,488 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COG4-207ENST00000530314 NISCHQ9Y2I1 1504 aa19.19■□□□□ 0.66
COG4-207ENST00000530314 HRCP23327 699 aa17.2■□□□□ 0.34
COG4-207ENST00000530314 PELP1Q8IZL8 1130 aaKnown RBP17.16■□□□□ 0.34
COG4-207ENST00000530314 PCGF6Q9BYE7 350 aa17.02■□□□□ 0.32
COG4-207ENST00000530314 PPARGC1BQ86YN6 1023 aaKnown RBP16.97■□□□□ 0.31
COG4-207ENST00000530314 SUPT5HO00267 1087 aaKnown RBP16.88■□□□□ 0.29
COG4-207ENST00000530314 DCAF8L2P0C7V8 631 aa16.8■□□□□ 0.28
COG4-207ENST00000530314 SHROOM4Q9ULL8 1493 aa16.66■□□□□ 0.26
COG4-207ENST00000530314 MYT1Q01538 1121 aa16.62■□□□□ 0.25
COG4-207ENST00000530314 CCDC180Q9P1Z9 1646 aa16.41■□□□□ 0.22
COG4-207ENST00000530314 SCAF1Q9H7N4 1312 aaKnown RBP16.4■□□□□ 0.22
COG4-207ENST00000530314 ABCC9O60706 1549 aa16.34■□□□□ 0.21
COG4-207ENST00000530314 CHIC1Q5VXU3 224 aa16.29■□□□□ 0.2
COG4-207ENST00000530314 ZEB1P37275 1124 aaPredicted RBP16.26■□□□□ 0.19
COG4-207ENST00000530314 TRIM26Q12899 539 aaPredicted RBP16.22■□□□□ 0.19
COG4-207ENST00000530314 LOC105371045A0A1W2PR82 267 aa16.15■□□□□ 0.18
COG4-207ENST00000530314 MYO15BQ96JP2 1530 aa16.09■□□□□ 0.17
COG4-207ENST00000530314 CENPBP07199 599 aaPredicted RBP16.07■□□□□ 0.16
COG4-207ENST00000530314 GTF3C3Q9Y5Q9 886 aa16.04■□□□□ 0.16
COG4-207ENST00000530314 ZCCHC6Q5VYS8 1495 aaKnown RBP16.04■□□□□ 0.16
COG4-207ENST00000530314 ACIN1Q9UKV3 1341 aaKnown RBP16.03■□□□□ 0.16
COG4-207ENST00000530314 NEUROD1Q13562 356 aa15.96■□□□□ 0.15
COG4-207ENST00000530314 DCAF1Q9Y4B6 1507 aa15.85■□□□□ 0.13
COG4-207ENST00000530314 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
COG4-207ENST00000530314 YTHDC1Q96MU7 727 aaKnown RBP15.79■□□□□ 0.12
COG4-207ENST00000530314 CCER1Q8TC90 406 aaPredicted RBP15.77■□□□□ 0.12
COG4-207ENST00000530314 DIEXFQ68CQ4 756 aaKnown RBP15.75■□□□□ 0.11
COG4-207ENST00000530314 FAM9AQ8IZU1 332 aaPredicted RBP15.72■□□□□ 0.11
COG4-207ENST00000530314 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.65■□□□□ 0.1
COG4-207ENST00000530314 PABPN1Q86U42 306 aaKnown RBP eCLIP15.64■□□□□ 0.091e-7■■■□□ 14.6
COG4-207ENST00000530314 SCRIBQ14160 1630 aa15.63■□□□□ 0.09
COG4-207ENST00000530314 TTBK1Q5TCY1 1321 aaPredicted RBP15.5■□□□□ 0.07
COG4-207ENST00000530314 TRIM41Q8WV44 630 aa15.48■□□□□ 0.07
COG4-207ENST00000530314 NACADO15069 1562 aa15.46■□□□□ 0.07
COG4-207ENST00000530314 RB1CC1Q8TDY2 1594 aa15.44■□□□□ 0.06
COG4-207ENST00000530314 BCL11AQ9H165 835 aa15.44■□□□□ 0.06
COG4-207ENST00000530314 ZNF316A6NFI3 1004 aaPredicted RBP15.3■□□□□ 0.04
COG4-207ENST00000530314 ANP32EQ9BTT0 268 aa15.28■□□□□ 0.04
COG4-207ENST00000530314 MIER1Q8N108 512 aa15.23■□□□□ 0.03
COG4-207ENST00000530314 CECR2Q9BXF3 1484 aa15.19■□□□□ 0.02
COG4-207ENST00000530314 CSRNP3Q8WYN3 585 aa15.12■□□□□ 0.01
COG4-207ENST00000530314 UNC13AQ9UPW8 1703 aa15.09■□□□□ 0.01
COG4-207ENST00000530314 BCANQ96GW7 911 aa15.07■□□□□ 0
COG4-207ENST00000530314 SUPT16HQ9Y5B9 1047 aaKnown RBP15.05■□□□□ -0
COG4-207ENST00000530314 ERICH6Q7L0X2 663 aa15.04■□□□□ -0
COG4-207ENST00000530314 TSHZ2Q9NRE2 1034 aa15.03■□□□□ -0
COG4-207ENST00000530314 BICRAQ9NZM4 1560 aa15.01□□□□□ -0.01
COG4-207ENST00000530314 RSF1Q96T23 1441 aaPredicted RBP15.01□□□□□ -0.01
COG4-207ENST00000530314 HNRNPUL2Q1KMD3 747 aaKnown RBP14.98□□□□□ -0.01
COG4-207ENST00000530314 MROH2BQ7Z745 1585 aa14.98□□□□□ -0.01
COG4-207ENST00000530314 CLSPNQ9HAW4 1339 aa14.96□□□□□ -0.01
COG4-207ENST00000530314 NEFLP07196 543 aa14.92□□□□□ -0.02
COG4-207ENST00000530314 PRKCSHP14314 528 aaPredicted RBP14.88□□□□□ -0.03
COG4-207ENST00000530314 WIZO95785 1651 aa14.84□□□□□ -0.03
COG4-207ENST00000530314 FKBP8Q14318 412 aa14.84□□□□□ -0.03
COG4-207ENST00000530314 UBTFP17480 764 aaKnown RBP14.82□□□□□ -0.04
COG4-207ENST00000530314 APLP2Q06481 763 aa14.78□□□□□ -0.04
COG4-207ENST00000530314 BAZ1AQ9NRL2 1556 aaPredicted RBP14.78□□□□□ -0.04
COG4-207ENST00000530314 RBM19Q9Y4C8 960 aaKnown RBP14.75□□□□□ -0.05
COG4-207ENST00000530314 ITGAEP38570 1179 aa14.74□□□□□ -0.05
COG4-207ENST00000530314 SMARCA4P51532 1647 aa14.73□□□□□ -0.05
COG4-207ENST00000530314 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
COG4-207ENST00000530314 RANGAP1P46060 587 aaPredicted RBP14.65□□□□□ -0.06
COG4-207ENST00000530314 EIF4G1Q04637 1599 aaKnown RBP14.65□□□□□ -0.06
COG4-207ENST00000530314 ATAD2BQ9ULI0 1458 aa14.62□□□□□ -0.07
COG4-207ENST00000530314 CDK11AQ9UQ88 783 aaPredicted RBP14.6□□□□□ -0.07
COG4-207ENST00000530314 BAZ1BQ9UIG0 1483 aaKnown RBP14.59□□□□□ -0.07
COG4-207ENST00000530314 CCDC88BA6NC98 1476 aa14.55□□□□□ -0.08
COG4-207ENST00000530314 DEKP35659 375 aaKnown RBP14.55□□□□□ -0.08
COG4-207ENST00000530314 TRIM52Q96A61 297 aa14.53□□□□□ -0.08
COG4-207ENST00000530314 KCNH8Q96L42 1107 aa14.53□□□□□ -0.08
COG4-207ENST00000530314 MYT1LQ9UL68 1186 aa14.53□□□□□ -0.08
COG4-207ENST00000530314 NBR1Q14596 966 aa14.52□□□□□ -0.09
COG4-207ENST00000530314 CC2D2AQ9P2K1 1620 aa14.49□□□□□ -0.09
COG4-207ENST00000530314 ANO8Q9HCE9 1232 aaPredicted RBP14.49□□□□□ -0.09
COG4-207ENST00000530314 TOP2AP11388 1531 aaKnown RBP14.48□□□□□ -0.09
COG4-207ENST00000530314 DDX10Q13206 875 aaKnown RBP14.47□□□□□ -0.09
COG4-207ENST00000530314 CEP162Q5TB80 1403 aa14.47□□□□□ -0.09
COG4-207ENST00000530314 RTL5Q5HYW3 569 aaPredicted RBP14.47□□□□□ -0.09
COG4-207ENST00000530314 MSH5O43196 834 aa14.46□□□□□ -0.09
COG4-207ENST00000530314 SMARCA2P51531 1590 aa14.45□□□□□ -0.1
COG4-207ENST00000530314 IRX6P78412 446 aaPredicted RBP14.45□□□□□ -0.1
COG4-207ENST00000530314 CCDC136Q96JN2 1154 aa14.39□□□□□ -0.11
COG4-207ENST00000530314 RTN4Q9NQC3 1192 aaKnown RBP14.39□□□□□ -0.11
COG4-207ENST00000530314 NCAPD3P42695 1498 aa14.39□□□□□ -0.11
COG4-207ENST00000530314 ANP32CO43423 234 aa14.38□□□□□ -0.11
COG4-207ENST00000530314 ABCC8Q09428 1581 aa14.37□□□□□ -0.11
COG4-207ENST00000530314 WRNQ14191 1432 aaPredicted RBP eCLIP14.35□□□□□ -0.11
COG4-207ENST00000530314 FANCIQ9NVI1 1328 aa14.34□□□□□ -0.11
COG4-207ENST00000530314 EIF5BO60841 1220 aaKnown RBP14.33□□□□□ -0.12
COG4-207ENST00000530314 PEG3Q9GZU2 1588 aa14.32□□□□□ -0.12
COG4-207ENST00000530314 SALL2Q9Y467 1007 aaPredicted RBP14.32□□□□□ -0.12
COG4-207ENST00000530314 TNIKQ9UKE5 1360 aa14.31□□□□□ -0.12
COG4-207ENST00000530314 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.31□□□□□ -0.12
COG4-207ENST00000530314 HIRIP3Q9BW71 556 aaPredicted RBP14.29□□□□□ -0.12
COG4-207ENST00000530314 NESP48681 1621 aa14.28□□□□□ -0.12
COG4-207ENST00000530314 HNRNPUQ00839 825 aaKnown RBP eCLIP14.28□□□□□ -0.12
COG4-207ENST00000530314 NOP58Q9Y2X3 529 aaKnown RBP14.27□□□□□ -0.13
COG4-207ENST00000530314 ANP32AP39687 249 aaKnown RBP14.23□□□□□ -0.13
COG4-207ENST00000530314 HMGXB3Q12766 1538 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms