RNA–Protein interactions for RNA: ENST00000528805.1

STX3-202, Transcript of syntaxin 3, humanhuman

TSL 1 (best)

Gene STX3, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX3-202ENST00000528805 CHIC1Q5VXU3 224 aa17.17■□□□□ 0.34
STX3-202ENST00000528805 AEBP2Q6ZN18 517 aaPredicted RBP16.93■□□□□ 0.3
STX3-202ENST00000528805 PHF23Q9BUL5 403 aaPredicted RBP15.16■□□□□ 0.02
STX3-202ENST00000528805 SENP3Q9H4L4 574 aaPredicted RBP14.28□□□□□ -0.12
STX3-202ENST00000528805 PLPPR3Q6T4P5 718 aa14.21□□□□□ -0.13
STX3-202ENST00000528805 NISCHQ9Y2I1 1504 aa13.37□□□□□ -0.27
STX3-202ENST00000528805 ADRA2BP18089 450 aa13.26□□□□□ -0.29
STX3-202ENST00000528805 FOXD1Q16676 465 aa13.15□□□□□ -0.3
STX3-202ENST00000528805 PPP6R1Q9UPN7 881 aa13.14□□□□□ -0.31
STX3-202ENST00000528805 ABCC9O60706 1549 aa13.11□□□□□ -0.31
STX3-202ENST00000528805 KCNA4P22459 653 aa13.01□□□□□ -0.33
STX3-202ENST00000528805 DNAJC5BQ9UF47 199 aa12.96□□□□□ -0.33
STX3-202ENST00000528805 EHMT2Q96KQ7 1210 aa12.82□□□□□ -0.36
STX3-202ENST00000528805 PPP4R3CPQ6ZMV5 832 aa12.59□□□□□ -0.39
STX3-202ENST00000528805 PIAS4Q8N2W9 510 aaPredicted RBP12.54□□□□□ -0.4
STX3-202ENST00000528805 SLC4A1APQ9BWU0 796 aaKnown RBP12.49□□□□□ -0.41
STX3-202ENST00000528805 NCBP3Q53F19 620 aaKnown RBP12.45□□□□□ -0.42
STX3-202ENST00000528805 CSRNP3Q8WYN3 585 aa12.45□□□□□ -0.42
STX3-202ENST00000528805 DNAJC5Q9H3Z4 198 aa12.42□□□□□ -0.42
STX3-202ENST00000528805 NPM3O75607 178 aaKnown RBP12.28□□□□□ -0.44
STX3-202ENST00000528805 PABPN1Q86U42 306 aaKnown RBP eCLIP12.26□□□□□ -0.45
STX3-202ENST00000528805 CNKSR2Q8WXI2 1034 aa12.11□□□□□ -0.47
STX3-202ENST00000528805 CCDC180Q9P1Z9 1646 aa12.08□□□□□ -0.48
STX3-202ENST00000528805 DCAF8L2P0C7V8 631 aa12.06□□□□□ -0.48
STX3-202ENST00000528805 SCAF1Q9H7N4 1312 aaKnown RBP12.05□□□□□ -0.48
STX3-202ENST00000528805 RB1CC1Q8TDY2 1594 aa12.02□□□□□ -0.49
STX3-202ENST00000528805 ZBTB22O15209 634 aa12□□□□□ -0.49
STX3-202ENST00000528805 MSH5O43196 834 aa11.9□□□□□ -0.5
STX3-202ENST00000528805 CECR2Q9BXF3 1484 aa11.86□□□□□ -0.51
STX3-202ENST00000528805 FOXD4L1Q9NU39 408 aa11.82□□□□□ -0.52
STX3-202ENST00000528805 TRIM41Q8WV44 630 aa11.77□□□□□ -0.53
STX3-202ENST00000528805 NACADO15069 1562 aa11.75□□□□□ -0.53
STX3-202ENST00000528805 RNF216Q9NWF9 866 aaPredicted RBP11.74□□□□□ -0.53
STX3-202ENST00000528805 MAPK8IP2Q13387 824 aaPredicted RBP11.72□□□□□ -0.53
STX3-202ENST00000528805 CC2D2AQ9P2K1 1620 aa11.65□□□□□ -0.54
STX3-202ENST00000528805 BICRAQ9NZM4 1560 aa11.6□□□□□ -0.55
STX3-202ENST00000528805 HOXD11P31277 338 aaPredicted RBP11.54□□□□□ -0.56
STX3-202ENST00000528805 DMRT2Q9Y5R5 561 aa11.51□□□□□ -0.57
STX3-202ENST00000528805 UNC13AQ9UPW8 1703 aa11.47□□□□□ -0.57
STX3-202ENST00000528805 CUX2O14529 1486 aa11.47□□□□□ -0.57
STX3-202ENST00000528805 EIF4G1Q04637 1599 aaKnown RBP11.45□□□□□ -0.58
STX3-202ENST00000528805 SLC4A2P04920 1241 aa11.44□□□□□ -0.58
STX3-202ENST00000528805 ERCC6Q03468 1493 aa11.41□□□□□ -0.58
STX3-202ENST00000528805 ATXN8OSP0DMR3 200 aa11.38□□□□□ -0.59
STX3-202ENST00000528805 SHROOM4Q9ULL8 1493 aa11.37□□□□□ -0.59
STX3-202ENST00000528805 MYCNP04198 464 aaPredicted RBP11.34□□□□□ -0.59
STX3-202ENST00000528805 AMER1Q5JTC6 1135 aaPredicted RBP11.34□□□□□ -0.59
STX3-202ENST00000528805 RTN4Q9NQC3 1192 aaKnown RBP11.31□□□□□ -0.6
STX3-202ENST00000528805 MYO15BQ96JP2 1530 aa11.28□□□□□ -0.6
STX3-202ENST00000528805 SLC24A1O60721 1099 aa11.25□□□□□ -0.61
STX3-202ENST00000528805 SCRIBQ14160 1630 aa11.24□□□□□ -0.61
STX3-202ENST00000528805 FKBP8Q14318 412 aa11.18□□□□□ -0.62
STX3-202ENST00000528805 TRHP20396 242 aaPredicted RBP11.1□□□□□ -0.63
STX3-202ENST00000528805 OSCARQ8IYS5 282 aa11.07□□□□□ -0.64
STX3-202ENST00000528805 NESP48681 1621 aa11.01□□□□□ -0.65
STX3-202ENST00000528805 ATF5Q9Y2D1 282 aaPredicted RBP10.95□□□□□ -0.66
STX3-202ENST00000528805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.94□□□□□ -0.66
STX3-202ENST00000528805 HNRNPUL2Q1KMD3 747 aaKnown RBP10.94□□□□□ -0.66
STX3-202ENST00000528805 SAMD1Q6SPF0 538 aaPredicted RBP10.93□□□□□ -0.66
STX3-202ENST00000528805 NCAPD3P42695 1498 aa10.92□□□□□ -0.66
STX3-202ENST00000528805 CYB5RLQ6IPT4 315 aa10.91□□□□□ -0.66
STX3-202ENST00000528805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.91□□□□□ -0.66
STX3-202ENST00000528805 SMARCA2P51531 1590 aa10.9□□□□□ -0.67
STX3-202ENST00000528805 DCAF1Q9Y4B6 1507 aa10.89□□□□□ -0.67
STX3-202ENST00000528805 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
STX3-202ENST00000528805 DCAF8L1A6NGE4 600 aa10.86□□□□□ -0.67
STX3-202ENST00000528805 U3KPZ7 1027 aaPredicted RBP10.86□□□□□ -0.67
STX3-202ENST00000528805 PDS5BQ9NTI5 1447 aa10.84□□□□□ -0.67
STX3-202ENST00000528805 THOC2Q8NI27 1593 aaKnown RBP10.84□□□□□ -0.67
STX3-202ENST00000528805 ILDR1Q86SU0 546 aaPredicted RBP10.83□□□□□ -0.68
STX3-202ENST00000528805 ATAD2BQ9ULI0 1458 aa10.81□□□□□ -0.68
STX3-202ENST00000528805 BAZ1AQ9NRL2 1556 aaPredicted RBP10.77□□□□□ -0.68
STX3-202ENST00000528805 RIMBP3CA6NJZ7 1639 aa10.72□□□□□ -0.69
STX3-202ENST00000528805 RIMBP3BA6NNM3 1639 aa10.72□□□□□ -0.69
STX3-202ENST00000528805 RIMBP3Q9UFD9 1639 aa10.72□□□□□ -0.69
STX3-202ENST00000528805 ZNF219Q9P2Y4 722 aaPredicted RBP10.71□□□□□ -0.69
STX3-202ENST00000528805 MRC2Q9UBG0 1479 aa10.71□□□□□ -0.69
STX3-202ENST00000528805 LAMC3Q9Y6N6 1575 aa10.7□□□□□ -0.7
STX3-202ENST00000528805 BAZ1BQ9UIG0 1483 aaKnown RBP10.7□□□□□ -0.7
STX3-202ENST00000528805 APLP2Q06481 763 aa10.68□□□□□ -0.7
STX3-202ENST00000528805 ARHGEF11O15085 1522 aa10.68□□□□□ -0.7
STX3-202ENST00000528805 HMGXB3Q12766 1538 aa10.66□□□□□ -0.7
STX3-202ENST00000528805 FBXO3Q9UK99 471 aa10.65□□□□□ -0.7
STX3-202ENST00000528805 CADPSQ9ULU8 1353 aa10.65□□□□□ -0.71
STX3-202ENST00000528805 KIF21AQ7Z4S6 1674 aa10.64□□□□□ -0.71
STX3-202ENST00000528805 FBLN2P98095 1184 aa10.61□□□□□ -0.71
STX3-202ENST00000528805 WDR62O43379 1518 aa10.61□□□□□ -0.71
STX3-202ENST00000528805 SPDYE4A6NLX3 237 aa10.58□□□□□ -0.72
STX3-202ENST00000528805 PROM2Q8N271 834 aa10.58□□□□□ -0.72
STX3-202ENST00000528805 CEP164Q9UPV0 1460 aa10.55□□□□□ -0.72
STX3-202ENST00000528805 MKRN4PQ13434 485 aaPredicted RBP10.54□□□□□ -0.72
STX3-202ENST00000528805 ARAP1Q96P48 1450 aa10.53□□□□□ -0.72
STX3-202ENST00000528805 SMARCA4P51532 1647 aa10.5□□□□□ -0.73
STX3-202ENST00000528805 FANCD2Q9BXW9 1451 aa10.49□□□□□ -0.73
STX3-202ENST00000528805 VASPP50552 380 aaPredicted RBP10.48□□□□□ -0.73
STX3-202ENST00000528805 PLCB2Q00722 1185 aa10.45□□□□□ -0.74
STX3-202ENST00000528805 ZNF608Q9ULD9 1512 aaPredicted RBP10.43□□□□□ -0.74
STX3-202ENST00000528805 RSF1Q96T23 1441 aaPredicted RBP10.4□□□□□ -0.75
STX3-202ENST00000528805 URB2Q14146 1524 aaKnown RBP10.38□□□□□ -0.75
STX3-202ENST00000528805 IFNLR1Q8IU57 520 aaPredicted RBP10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms