RNA–Protein interactions for RNA: ENST00000528704.1

ATG13-212, Transcript of autophagy related 13, humanhuman

TSL 5

Gene ATG13, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-212ENST00000528704 AEBP2Q6ZN18 517 aaPredicted RBP20.6■□□□□ 0.89
ATG13-212ENST00000528704 CHIC1Q5VXU3 224 aa19.27■□□□□ 0.68
ATG13-212ENST00000528704 SENP3Q9H4L4 574 aaPredicted RBP17.74■□□□□ 0.43
ATG13-212ENST00000528704 PHF23Q9BUL5 403 aaPredicted RBP17.37■□□□□ 0.37
ATG13-212ENST00000528704 POTEDQ86YR6 584 aa16.98■□□□□ 0.31
ATG13-212ENST00000528704 FOXD1Q16676 465 aa16.62■□□□□ 0.25
ATG13-212ENST00000528704 MSH5O43196 834 aa15.9■□□□□ 0.14
ATG13-212ENST00000528704 PIAS4Q8N2W9 510 aaPredicted RBP15.36■□□□□ 0.05
ATG13-212ENST00000528704 PPP6R1Q9UPN7 881 aa14.87□□□□□ -0.03
ATG13-212ENST00000528704 ADRA2BP18089 450 aa14.79□□□□□ -0.04
ATG13-212ENST00000528704 PLPPR3Q6T4P5 718 aa14.6□□□□□ -0.07
ATG13-212ENST00000528704 CACNB1Q02641 598 aaPredicted RBP14.19□□□□□ -0.14
ATG13-212ENST00000528704 NISCHQ9Y2I1 1504 aa14□□□□□ -0.17
ATG13-212ENST00000528704 DMRT2Q9Y5R5 561 aa13.92□□□□□ -0.18
ATG13-212ENST00000528704 MAPK8IP2Q13387 824 aaPredicted RBP13.83□□□□□ -0.2
ATG13-212ENST00000528704 SCAF1Q9H7N4 1312 aaKnown RBP13.56□□□□□ -0.24
ATG13-212ENST00000528704 DNAJC5Q9H3Z4 198 aa13.51□□□□□ -0.25
ATG13-212ENST00000528704 RNF39Q9H2S5 420 aa13.48□□□□□ -0.25
ATG13-212ENST00000528704 DCAF8L1A6NGE4 600 aa13.44□□□□□ -0.26
ATG13-212ENST00000528704 DNAJC5BQ9UF47 199 aa13.44□□□□□ -0.26
ATG13-212ENST00000528704 C1QBPQ07021 282 aaKnown RBP13.24□□□□□ -0.29
ATG13-212ENST00000528704 POTEHQ6S545 545 aa13.14□□□□□ -0.31
ATG13-212ENST00000528704 HOXD11P31277 338 aaPredicted RBP13.06□□□□□ -0.32
ATG13-212ENST00000528704 RNF216Q9NWF9 866 aaPredicted RBP12.73□□□□□ -0.37
ATG13-212ENST00000528704 PPP4R3CPQ6ZMV5 832 aa12.68□□□□□ -0.38
ATG13-212ENST00000528704 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
ATG13-212ENST00000528704 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.48□□□□□ -0.41
ATG13-212ENST00000528704 ABCC9O60706 1549 aa12.47□□□□□ -0.41
ATG13-212ENST00000528704 DSG3P32926 999 aa12.33□□□□□ -0.44
ATG13-212ENST00000528704 CAPN15O75808 1086 aa12.23□□□□□ -0.45
ATG13-212ENST00000528704 TRIM41Q8WV44 630 aa12.22□□□□□ -0.45
ATG13-212ENST00000528704 SPINK5Q9NQ38 1064 aaPredicted RBP12.18□□□□□ -0.46
ATG13-212ENST00000528704 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
ATG13-212ENST00000528704 CCDC180Q9P1Z9 1646 aa12.04□□□□□ -0.48
ATG13-212ENST00000528704 ILDR1Q86SU0 546 aaPredicted RBP12.01□□□□□ -0.49
ATG13-212ENST00000528704 NCBP3Q53F19 620 aaKnown RBP11.95□□□□□ -0.5
ATG13-212ENST00000528704 SP7Q8TDD2 431 aaPredicted RBP11.92□□□□□ -0.5
ATG13-212ENST00000528704 CHRDL2Q6WN34 429 aa11.89□□□□□ -0.51
ATG13-212ENST00000528704 ABCB7O75027 752 aa11.86□□□□□ -0.51
ATG13-212ENST00000528704 TRHP20396 242 aaPredicted RBP11.83□□□□□ -0.52
ATG13-212ENST00000528704 RBM42Q9BTD8 480 aaKnown RBP11.82□□□□□ -0.52
ATG13-212ENST00000528704 ZCCHC6Q5VYS8 1495 aaKnown RBP11.8□□□□□ -0.52
ATG13-212ENST00000528704 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
ATG13-212ENST00000528704 NPM3O75607 178 aaKnown RBP11.75□□□□□ -0.53
ATG13-212ENST00000528704 APLP2Q06481 763 aa11.7□□□□□ -0.54
ATG13-212ENST00000528704 DCAF1Q9Y4B6 1507 aa11.65□□□□□ -0.54
ATG13-212ENST00000528704 SHROOM4Q9ULL8 1493 aa11.57□□□□□ -0.56
ATG13-212ENST00000528704 DCAF8L2P0C7V8 631 aa11.51□□□□□ -0.57
ATG13-212ENST00000528704 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.47□□□□□ -0.57
ATG13-212ENST00000528704 HAX1O00165 279 aa11.47□□□□□ -0.57
ATG13-212ENST00000528704 HNRNPUL2Q1KMD3 747 aaKnown RBP11.47□□□□□ -0.57
ATG13-212ENST00000528704 SLC4A2P04920 1241 aa11.43□□□□□ -0.58
ATG13-212ENST00000528704 PIP4P2Q8N4L2 257 aa11.42□□□□□ -0.58
ATG13-212ENST00000528704 MYO15BQ96JP2 1530 aa11.41□□□□□ -0.58
ATG13-212ENST00000528704 SUPT5HO00267 1087 aaKnown RBP11.41□□□□□ -0.58
ATG13-212ENST00000528704 SAMD1Q6SPF0 538 aaPredicted RBP11.36□□□□□ -0.59
ATG13-212ENST00000528704 CECR2Q9BXF3 1484 aa11.36□□□□□ -0.59
ATG13-212ENST00000528704 AKT1S1Q96B36 256 aa11.35□□□□□ -0.59
ATG13-212ENST00000528704 CUX2O14529 1486 aa11.35□□□□□ -0.59
ATG13-212ENST00000528704 PABPN1Q86U42 306 aaKnown RBP eCLIP11.34□□□□□ -0.59
ATG13-212ENST00000528704 POLA2Q14181 598 aa11.3□□□□□ -0.6
ATG13-212ENST00000528704 REM2Q8IYK8 340 aaPredicted RBP11.24□□□□□ -0.61
ATG13-212ENST00000528704 EVX2Q03828 476 aa11.22□□□□□ -0.61
ATG13-212ENST00000528704 PLSCR2Q9NRY7 297 aa11.22□□□□□ -0.61
ATG13-212ENST00000528704 NACADO15069 1562 aa11.2□□□□□ -0.62
ATG13-212ENST00000528704 FXR2P51116 673 aaKnown RBP eCLIP11.19□□□□□ -0.62
ATG13-212ENST00000528704 LHX8Q68G74 356 aa11.17□□□□□ -0.62
ATG13-212ENST00000528704 SOCS7O14512 581 aa11.16□□□□□ -0.62
ATG13-212ENST00000528704 PITPNM1O00562 1244 aa11.14□□□□□ -0.63
ATG13-212ENST00000528704 LMTK3Q96Q04 1460 aa11.12□□□□□ -0.63
ATG13-212ENST00000528704 CC2D2AQ9P2K1 1620 aa11.12□□□□□ -0.63
ATG13-212ENST00000528704 ILDR2Q71H61 639 aa11.07□□□□□ -0.64
ATG13-212ENST00000528704 SCRIBQ14160 1630 aa11.02□□□□□ -0.64
ATG13-212ENST00000528704 ZBTB12Q9Y330 459 aaPredicted RBP11.01□□□□□ -0.65
ATG13-212ENST00000528704 RB1CC1Q8TDY2 1594 aa11.01□□□□□ -0.65
ATG13-212ENST00000528704 RSF1Q96T23 1441 aaPredicted RBP10.98□□□□□ -0.65
ATG13-212ENST00000528704 OSCARQ8IYS5 282 aa10.97□□□□□ -0.65
ATG13-212ENST00000528704 GABBR2O75899 941 aa10.93□□□□□ -0.66
ATG13-212ENST00000528704 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
ATG13-212ENST00000528704 C19orf67A6NJJ6 358 aa10.87□□□□□ -0.67
ATG13-212ENST00000528704 PRKAR2AP13861 404 aaKnown RBP10.85□□□□□ -0.67
ATG13-212ENST00000528704 BAZ1AQ9NRL2 1556 aaPredicted RBP10.82□□□□□ -0.68
ATG13-212ENST00000528704 BICRAQ9NZM4 1560 aa10.82□□□□□ -0.68
ATG13-212ENST00000528704 ERCC6Q03468 1493 aa10.79□□□□□ -0.68
ATG13-212ENST00000528704 KCNA4P22459 653 aa10.77□□□□□ -0.69
ATG13-212ENST00000528704 FBXO41Q8TF61 875 aa10.77□□□□□ -0.69
ATG13-212ENST00000528704 UNC13AQ9UPW8 1703 aa10.77□□□□□ -0.69
ATG13-212ENST00000528704 MROH2BQ7Z745 1585 aa10.76□□□□□ -0.69
ATG13-212ENST00000528704 RIMBP3CA6NJZ7 1639 aa10.71□□□□□ -0.69
ATG13-212ENST00000528704 RIMBP3BA6NNM3 1639 aa10.71□□□□□ -0.69
ATG13-212ENST00000528704 RIMBP3Q9UFD9 1639 aa10.71□□□□□ -0.69
ATG13-212ENST00000528704 ATF5Q9Y2D1 282 aaPredicted RBP10.7□□□□□ -0.7
ATG13-212ENST00000528704 POTEIP0CG38 1075 aa10.68□□□□□ -0.7
ATG13-212ENST00000528704 CLEC11AQ9Y240 323 aa10.67□□□□□ -0.7
ATG13-212ENST00000528704 DISP3Q9P2K9 1392 aa10.66□□□□□ -0.7
ATG13-212ENST00000528704 WIZO95785 1651 aa10.66□□□□□ -0.7
ATG13-212ENST00000528704 TOP2AP11388 1531 aaKnown RBP10.64□□□□□ -0.71
ATG13-212ENST00000528704 LOC105371045A0A1W2PR82 267 aa10.64□□□□□ -0.71
ATG13-212ENST00000528704 SMARCA4P51532 1647 aa10.64□□□□□ -0.71
ATG13-212ENST00000528704 SPDYE1Q8NFV5 336 aaPredicted RBP10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms