RNA–Protein interactions for RNA: ENST00000527805.5

ATM-212, Transcript of ATM serine/threonine kinase, humanhuman

TSL 1 (best)

Gene ATM, Length 4,841 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-212ENST00000527805 NISCHQ9Y2I1 1504 aa28.57■■■□□ 2.16
ATM-212ENST00000527805 DCAF8L2P0C7V8 631 aa27.37■■□□□ 1.97
ATM-212ENST00000527805 SHROOM4Q9ULL8 1493 aa25.81■■□□□ 1.72
ATM-212ENST00000527805 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
ATM-212ENST00000527805 ABCC9O60706 1549 aa24.58■■□□□ 1.53
ATM-212ENST00000527805 EHMT2Q96KQ7 1210 aa24.26■■□□□ 1.47
ATM-212ENST00000527805 FAM9AQ8IZU1 332 aaPredicted RBP24■■□□□ 1.43
ATM-212ENST00000527805 PABPN1Q86U42 306 aaKnown RBP eCLIP23.98■■□□□ 1.43
ATM-212ENST00000527805 CCDC180Q9P1Z9 1646 aa23.93■■□□□ 1.42
ATM-212ENST00000527805 TRIM41Q8WV44 630 aa23.85■■□□□ 1.41
ATM-212ENST00000527805 ZCCHC6Q5VYS8 1495 aaKnown RBP23.71■■□□□ 1.39
ATM-212ENST00000527805 APLP2Q06481 763 aa23.51■■□□□ 1.35
ATM-212ENST00000527805 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
ATM-212ENST00000527805 SCRIBQ14160 1630 aa23.37■■□□□ 1.33
ATM-212ENST00000527805 UBTFP17480 764 aaKnown RBP23.34■■□□□ 1.33
ATM-212ENST00000527805 TTBK1Q5TCY1 1321 aaPredicted RBP23.26■■□□□ 1.31
ATM-212ENST00000527805 CHIC1Q5VXU3 224 aa23.25■■□□□ 1.31
ATM-212ENST00000527805 RB1CC1Q8TDY2 1594 aa23.17■■□□□ 1.3
ATM-212ENST00000527805 ATP1B4Q9UN42 357 aaPredicted RBP23.11■■□□□ 1.29
ATM-212ENST00000527805 NACADO15069 1562 aa23.07■■□□□ 1.28
ATM-212ENST00000527805 PCGF6Q9BYE7 350 aa22.95■■□□□ 1.26
ATM-212ENST00000527805 LOC105371045A0A1W2PR82 267 aa22.92■■□□□ 1.26
ATM-212ENST00000527805 DCAF1Q9Y4B6 1507 aa22.86■■□□□ 1.25
ATM-212ENST00000527805 PPARGC1BQ86YN6 1023 aaKnown RBP22.75■■□□□ 1.23
ATM-212ENST00000527805 RSF1Q96T23 1441 aaPredicted RBP22.59■■□□□ 1.21
ATM-212ENST00000527805 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.55■■□□□ 1.2
ATM-212ENST00000527805 HNRNPUL2Q1KMD3 747 aaKnown RBP22.55■■□□□ 1.2
ATM-212ENST00000527805 CCER1Q8TC90 406 aaPredicted RBP22.45■■□□□ 1.18
ATM-212ENST00000527805 CECR2Q9BXF3 1484 aa22.44■■□□□ 1.18
ATM-212ENST00000527805 FBLN2P98095 1184 aa22.42■■□□□ 1.18
ATM-212ENST00000527805 MYO15BQ96JP2 1530 aa22.41■■□□□ 1.18
ATM-212ENST00000527805 CSRNP3Q8WYN3 585 aa22.37■■□□□ 1.17
ATM-212ENST00000527805 TRIM26Q12899 539 aaPredicted RBP22.34■■□□□ 1.17
ATM-212ENST00000527805 BAZ1AQ9NRL2 1556 aaPredicted RBP22.33■■□□□ 1.16
ATM-212ENST00000527805 BAZ1BQ9UIG0 1483 aaKnown RBP22.33■■□□□ 1.16
ATM-212ENST00000527805 ITGAEP38570 1179 aa22.31■■□□□ 1.16
ATM-212ENST00000527805 ZEB1P37275 1124 aaPredicted RBP22.2■■□□□ 1.14
ATM-212ENST00000527805 MYT1LQ9UL68 1186 aa22.15■■□□□ 1.14
ATM-212ENST00000527805 MROH2BQ7Z745 1585 aa22.13■■□□□ 1.13
ATM-212ENST00000527805 P3H3Q8IVL6 736 aa22.11■■□□□ 1.13
ATM-212ENST00000527805 FAM50AQ14320 339 aaKnown RBP21.96■■□□□ 1.11
ATM-212ENST00000527805 WRNQ14191 1432 aaPredicted RBP eCLIP21.95■■□□□ 1.1
ATM-212ENST00000527805 ARID3CA6NKF2 412 aa21.93■■□□□ 1.1
ATM-212ENST00000527805 SMARCA2P51531 1590 aa21.9■■□□□ 1.1
ATM-212ENST00000527805 CCDC88BA6NC98 1476 aa21.84■■□□□ 1.09
ATM-212ENST00000527805 CHMP7Q8WUX9 453 aaPredicted RBP21.81■■□□□ 1.08
ATM-212ENST00000527805 ERCC6Q03468 1493 aa21.78■■□□□ 1.08
ATM-212ENST00000527805 WIZO95785 1651 aa21.78■■□□□ 1.08
ATM-212ENST00000527805 ATAD2BQ9ULI0 1458 aa21.76■■□□□ 1.07
ATM-212ENST00000527805 EEA1Q15075 1411 aa21.7■■□□□ 1.06
ATM-212ENST00000527805 SMARCA4P51532 1647 aa21.7■■□□□ 1.06
ATM-212ENST00000527805 TOP2AP11388 1531 aaKnown RBP21.68■■□□□ 1.06
ATM-212ENST00000527805 CDK11AQ9UQ88 783 aaPredicted RBP21.68■■□□□ 1.06
ATM-212ENST00000527805 KIF27Q86VH2 1401 aa21.68■■□□□ 1.06
ATM-212ENST00000527805 TRIM52Q96A61 297 aa21.65■■□□□ 1.06
ATM-212ENST00000527805 HRCP23327 699 aa21.65■■□□□ 1.06
ATM-212ENST00000527805 PDS5BQ9NTI5 1447 aa21.59■■□□□ 1.05
ATM-212ENST00000527805 ZNF777Q9ULD5 760 aaPredicted RBP21.58■■□□□ 1.05
ATM-212ENST00000527805 CADPSQ9ULU8 1353 aa21.58■■□□□ 1.05
ATM-212ENST00000527805 CLIP1P30622 1438 aa21.57■■□□□ 1.04
ATM-212ENST00000527805 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
ATM-212ENST00000527805 NPM1P06748 294 aaKnown RBP eCLIP21.52■■□□□ 1.04
ATM-212ENST00000527805 ABCC8Q09428 1581 aa21.52■■□□□ 1.03
ATM-212ENST00000527805 SOGA1O94964 1423 aa21.5■■□□□ 1.03
ATM-212ENST00000527805 CUX2O14529 1486 aa21.5■■□□□ 1.03
ATM-212ENST00000527805 POLR3GLQ9BT43 218 aa21.46■■□□□ 1.03
ATM-212ENST00000527805 CEP164Q9UPV0 1460 aa21.45■■□□□ 1.02
ATM-212ENST00000527805 NEUROD1Q13562 356 aa21.44■■□□□ 1.02
ATM-212ENST00000527805 CEP162Q5TB80 1403 aa21.44■■□□□ 1.02
ATM-212ENST00000527805 EIF4G1Q04637 1599 aaKnown RBP21.43■■□□□ 1.02
ATM-212ENST00000527805 CARMIL1Q5VZK9 1371 aa21.4■■□□□ 1.02
ATM-212ENST00000527805 TNIKQ9UKE5 1360 aa21.4■■□□□ 1.02
ATM-212ENST00000527805 NCAPD3P42695 1498 aa21.38■■□□□ 1.01
ATM-212ENST00000527805 TDRD9Q8NDG6 1382 aaKnown RBP21.37■■□□□ 1.01
ATM-212ENST00000527805 MTUS2Q5JR59 1369 aa21.37■■□□□ 1.01
ATM-212ENST00000527805 CENPBP07199 599 aaPredicted RBP21.34■■□□□ 1.01
ATM-212ENST00000527805 YTHDC1Q96MU7 727 aaKnown RBP21.29■■□□□ 1
ATM-212ENST00000527805 FANCD2Q9BXW9 1451 aa21.27■□□□□ 0.99
ATM-212ENST00000527805 PELP1Q8IZL8 1130 aaKnown RBP21.25■□□□□ 0.99
ATM-212ENST00000527805 CHIC2Q9UKJ5 165 aa21.24■□□□□ 0.99
ATM-212ENST00000527805 ZNF326Q5BKZ1 582 aaKnown RBP21.24■□□□□ 0.99
ATM-212ENST00000527805 CNGB1Q14028 1251 aaPredicted RBP21.23■□□□□ 0.99
ATM-212ENST00000527805 PLEKHD1A6NEE1 506 aa21.23■□□□□ 0.99
ATM-212ENST00000527805 KCNH8Q96L42 1107 aa21.23■□□□□ 0.99
ATM-212ENST00000527805 BICRAQ9NZM4 1560 aa21.21■□□□□ 0.99
ATM-212ENST00000527805 TSPY4P0CV99 314 aa21.16■□□□□ 0.98
ATM-212ENST00000527805 TSPY10P0CW01 314 aa21.16■□□□□ 0.98
ATM-212ENST00000527805 CC2D2AQ9P2K1 1620 aa21.11■□□□□ 0.97
ATM-212ENST00000527805 SLC4A1APQ9BWU0 796 aaKnown RBP21.1■□□□□ 0.97
ATM-212ENST00000527805 ESF1Q9H501 851 aaKnown RBP21.05■□□□□ 0.96
ATM-212ENST00000527805 GRWD1Q9BQ67 446 aaKnown RBP eCLIP21.03■□□□□ 0.962e-8■■■□□ 16.5
ATM-212ENST00000527805 FHAD1B1AJZ9 1412 aa21.03■□□□□ 0.96
ATM-212ENST00000527805 DIEXFQ68CQ4 756 aaKnown RBP21.02■□□□□ 0.96
ATM-212ENST00000527805 CFDP1Q9UEE9 299 aaPredicted RBP21.02■□□□□ 0.96
ATM-212ENST00000527805 RUSC2Q8N2Y8 1516 aa21.01■□□□□ 0.95
ATM-212ENST00000527805 RRP7BPQ9NSQ0 103 aa21■□□□□ 0.95
ATM-212ENST00000527805 HMGXB3Q12766 1538 aa20.98■□□□□ 0.95
ATM-212ENST00000527805 DNAJC5BQ9UF47 199 aa20.98■□□□□ 0.95
ATM-212ENST00000527805 RAPGEF2Q9Y4G8 1499 aa20.98■□□□□ 0.95
ATM-212ENST00000527805 CFTRP13569 1480 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms