RNA–Protein interactions for RNA: ENST00000523960.1

STK3-217, Transcript of serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene STK3, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STK3-217ENST00000523960 NISCHQ9Y2I1 1504 aa21.88■■□□□ 1.09
STK3-217ENST00000523960 DCAF8L2P0C7V8 631 aa20.27■□□□□ 0.84
STK3-217ENST00000523960 SUPT5HO00267 1087 aaKnown RBP19.48■□□□□ 0.71
STK3-217ENST00000523960 SHROOM4Q9ULL8 1493 aa19.41■□□□□ 0.7
STK3-217ENST00000523960 CCDC180Q9P1Z9 1646 aa18.61■□□□□ 0.57
STK3-217ENST00000523960 APLP2Q06481 763 aa18.4■□□□□ 0.54
STK3-217ENST00000523960 TRIM41Q8WV44 630 aa18.39■□□□□ 0.53
STK3-217ENST00000523960 ZCCHC6Q5VYS8 1495 aaKnown RBP18.29■□□□□ 0.52
STK3-217ENST00000523960 FAM9AQ8IZU1 332 aaPredicted RBP18.23■□□□□ 0.51
STK3-217ENST00000523960 ZEB1P37275 1124 aaPredicted RBP18.21■□□□□ 0.51
STK3-217ENST00000523960 EHMT2Q96KQ7 1210 aa18.08■□□□□ 0.49
STK3-217ENST00000523960 ABCC9O60706 1549 aa18.06■□□□□ 0.48
STK3-217ENST00000523960 CHIC1Q5VXU3 224 aa17.98■□□□□ 0.47
STK3-217ENST00000523960 PCGF6Q9BYE7 350 aa17.98■□□□□ 0.47
STK3-217ENST00000523960 UBTFP17480 764 aaKnown RBP17.9■□□□□ 0.46
STK3-217ENST00000523960 PELP1Q8IZL8 1130 aaKnown RBP17.85■□□□□ 0.45
STK3-217ENST00000523960 DCAF1Q9Y4B6 1507 aa17.84■□□□□ 0.45
STK3-217ENST00000523960 TRIM26Q12899 539 aaPredicted RBP17.81■□□□□ 0.44
STK3-217ENST00000523960 NACADO15069 1562 aa17.71■□□□□ 0.43
STK3-217ENST00000523960 SCRIBQ14160 1630 aa17.71■□□□□ 0.43
STK3-217ENST00000523960 CCER1Q8TC90 406 aaPredicted RBP17.69■□□□□ 0.42
STK3-217ENST00000523960 RB1CC1Q8TDY2 1594 aa17.69■□□□□ 0.42
STK3-217ENST00000523960 CENPBP07199 599 aaPredicted RBP17.54■□□□□ 0.4
STK3-217ENST00000523960 TTBK1Q5TCY1 1321 aaPredicted RBP17.53■□□□□ 0.4
STK3-217ENST00000523960 RANGAP1P46060 587 aaPredicted RBP17.52■□□□□ 0.39
STK3-217ENST00000523960 HRCP23327 699 aa17.5■□□□□ 0.39
STK3-217ENST00000523960 PABPN1Q86U42 306 aaKnown RBP eCLIP17.49■□□□□ 0.39
STK3-217ENST00000523960 ATP1B4Q9UN42 357 aaPredicted RBP17.47■□□□□ 0.39
STK3-217ENST00000523960 LOC105371045A0A1W2PR82 267 aa17.45■□□□□ 0.38
STK3-217ENST00000523960 MYO15BQ96JP2 1530 aa17.43■□□□□ 0.38
STK3-217ENST00000523960 RSF1Q96T23 1441 aaPredicted RBP17.26■□□□□ 0.35
STK3-217ENST00000523960 BAZ1AQ9NRL2 1556 aaPredicted RBP17.21■□□□□ 0.35
STK3-217ENST00000523960 CSRNP3Q8WYN3 585 aa17.2■□□□□ 0.34
STK3-217ENST00000523960 EEA1Q15075 1411 aa17.17■□□□□ 0.34
STK3-217ENST00000523960 PPARGC1BQ86YN6 1023 aaKnown RBP17.15■□□□□ 0.34
STK3-217ENST00000523960 HNRNPUL2Q1KMD3 747 aaKnown RBP17.03■□□□□ 0.32
STK3-217ENST00000523960 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.01■□□□□ 0.31
STK3-217ENST00000523960 NEFLP07196 543 aa17■□□□□ 0.31
STK3-217ENST00000523960 BAZ1BQ9UIG0 1483 aaKnown RBP16.99■□□□□ 0.31
STK3-217ENST00000523960 ITGAEP38570 1179 aa16.94■□□□□ 0.3
STK3-217ENST00000523960 GOLGA3Q08378 1498 aa16.89■□□□□ 0.29
STK3-217ENST00000523960 WRNQ14191 1432 aaPredicted RBP eCLIP16.86■□□□□ 0.29
STK3-217ENST00000523960 SMARCA2P51531 1590 aa16.86■□□□□ 0.29
STK3-217ENST00000523960 FAM50AQ14320 339 aaKnown RBP16.86■□□□□ 0.29
STK3-217ENST00000523960 CECR2Q9BXF3 1484 aa16.8■□□□□ 0.28
STK3-217ENST00000523960 CEP164Q9UPV0 1460 aa16.79■□□□□ 0.28
STK3-217ENST00000523960 TOP2AP11388 1531 aaKnown RBP16.79■□□□□ 0.28
STK3-217ENST00000523960 DIEXFQ68CQ4 756 aaKnown RBP16.79■□□□□ 0.28
STK3-217ENST00000523960 TNIKQ9UKE5 1360 aa16.77■□□□□ 0.27
STK3-217ENST00000523960 CDK11AQ9UQ88 783 aaPredicted RBP16.76■□□□□ 0.27
STK3-217ENST00000523960 MROH2BQ7Z745 1585 aa16.76■□□□□ 0.27
STK3-217ENST00000523960 YTHDC1Q96MU7 727 aaKnown RBP16.76■□□□□ 0.27
STK3-217ENST00000523960 CLIP1P30622 1438 aa16.74■□□□□ 0.27
STK3-217ENST00000523960 KIF27Q86VH2 1401 aa16.72■□□□□ 0.27
STK3-217ENST00000523960 ERICH6Q7L0X2 663 aa16.72■□□□□ 0.27
STK3-217ENST00000523960 MYT1Q01538 1121 aa16.72■□□□□ 0.27
STK3-217ENST00000523960 ACIN1Q9UKV3 1341 aaKnown RBP16.72■□□□□ 0.27
STK3-217ENST00000523960 MYT1LQ9UL68 1186 aa16.7■□□□□ 0.26
STK3-217ENST00000523960 CEP162Q5TB80 1403 aa16.68■□□□□ 0.26
STK3-217ENST00000523960 ZNF316A6NFI3 1004 aaPredicted RBP16.67■□□□□ 0.26
STK3-217ENST00000523960 TRIM52Q96A61 297 aa16.67■□□□□ 0.26
STK3-217ENST00000523960 CCDC88BA6NC98 1476 aa16.65■□□□□ 0.26
STK3-217ENST00000523960 SMARCA4P51532 1647 aa16.63■□□□□ 0.25
STK3-217ENST00000523960 WIZO95785 1651 aa16.57■□□□□ 0.24
STK3-217ENST00000523960 FBLN2P98095 1184 aa16.55■□□□□ 0.24
STK3-217ENST00000523960 P3H3Q8IVL6 736 aa16.52■□□□□ 0.24
STK3-217ENST00000523960 NEUROD1Q13562 356 aa16.51■□□□□ 0.23
STK3-217ENST00000523960 ANP32CO43423 234 aa16.51■□□□□ 0.23
STK3-217ENST00000523960 CLSPNQ9HAW4 1339 aa16.5■□□□□ 0.23
STK3-217ENST00000523960 POLR3GLQ9BT43 218 aa16.46■□□□□ 0.23
STK3-217ENST00000523960 MTUS2Q5JR59 1369 aa16.46■□□□□ 0.23
STK3-217ENST00000523960 FHAD1B1AJZ9 1412 aa16.46■□□□□ 0.23
STK3-217ENST00000523960 ATAD2BQ9ULI0 1458 aa16.44■□□□□ 0.22
STK3-217ENST00000523960 TONSLQ96HA7 1378 aa16.41■□□□□ 0.22
STK3-217ENST00000523960 PDS5BQ9NTI5 1447 aa16.37■□□□□ 0.21
STK3-217ENST00000523960 ABCC8Q09428 1581 aa16.36■□□□□ 0.21
STK3-217ENST00000523960 SOGA1O94964 1423 aa16.35■□□□□ 0.21
STK3-217ENST00000523960 CUX2O14529 1486 aa16.35■□□□□ 0.21
STK3-217ENST00000523960 CHMP7Q8WUX9 453 aaPredicted RBP16.35■□□□□ 0.21
STK3-217ENST00000523960 VPS8Q8N3P4 1428 aa16.34■□□□□ 0.21
STK3-217ENST00000523960 CARMIL1Q5VZK9 1371 aa16.34■□□□□ 0.21
STK3-217ENST00000523960 CADPSQ9ULU8 1353 aa16.29■□□□□ 0.2
STK3-217ENST00000523960 ZNF777Q9ULD5 760 aaPredicted RBP16.28■□□□□ 0.2
STK3-217ENST00000523960 ERCC6Q03468 1493 aa16.26■□□□□ 0.19
STK3-217ENST00000523960 DAXXQ9UER7 740 aaPredicted RBP16.24■□□□□ 0.19
STK3-217ENST00000523960 NPM1P06748 294 aaKnown RBP eCLIP16.23■□□□□ 0.19
STK3-217ENST00000523960 TSPY4P0CV99 314 aa16.23■□□□□ 0.19
STK3-217ENST00000523960 TSPY10P0CW01 314 aa16.23■□□□□ 0.19
STK3-217ENST00000523960 NCAPD3P42695 1498 aa16.21■□□□□ 0.19
STK3-217ENST00000523960 ZNF326Q5BKZ1 582 aaKnown RBP16.2■□□□□ 0.18
STK3-217ENST00000523960 FMN1Q68DA7 1419 aa16.19■□□□□ 0.18
STK3-217ENST00000523960 RAPGEF2Q9Y4G8 1499 aa16.19■□□□□ 0.18
STK3-217ENST00000523960 ARID3CA6NKF2 412 aa16.18■□□□□ 0.18
STK3-217ENST00000523960 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
STK3-217ENST00000523960 TIMELESSQ9UNS1 1208 aa16.18■□□□□ 0.18
STK3-217ENST00000523960 PLEKHD1A6NEE1 506 aa16.17■□□□□ 0.18
STK3-217ENST00000523960 GTF3C3Q9Y5Q9 886 aa16.15■□□□□ 0.18
STK3-217ENST00000523960 SLC4A1APQ9BWU0 796 aaKnown RBP16.15■□□□□ 0.18
STK3-217ENST00000523960 ARHGAP35Q9NRY4 1499 aa16.13■□□□□ 0.17
STK3-217ENST00000523960 HMGXB3Q12766 1538 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 97.7 ms