RNA–Protein interactions for RNA: ENST00000523914.5

PDZD9-202, Transcript of PDZ domain containing 9, humanhuman

TSL 1 (best)

Gene PDZD9, Length 1,331 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD9-202ENST00000523914 AEBP2Q6ZN18 517 aaPredicted RBP26.79■■□□□ 1.88
PDZD9-202ENST00000523914 CHIC1Q5VXU3 224 aa25.78■■□□□ 1.72
PDZD9-202ENST00000523914 PHF23Q9BUL5 403 aaPredicted RBP22.69■■□□□ 1.22
PDZD9-202ENST00000523914 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
PDZD9-202ENST00000523914 FOXD1Q16676 465 aa21.15■□□□□ 0.98
PDZD9-202ENST00000523914 PLPPR3Q6T4P5 718 aa20.74■□□□□ 0.91
PDZD9-202ENST00000523914 PPP6R1Q9UPN7 881 aa20.13■□□□□ 0.81
PDZD9-202ENST00000523914 ADRA2BP18089 450 aa20.06■□□□□ 0.8
PDZD9-202ENST00000523914 PIAS4Q8N2W9 510 aaPredicted RBP19.82■□□□□ 0.76
PDZD9-202ENST00000523914 MSH5O43196 834 aa19.57■□□□□ 0.72
PDZD9-202ENST00000523914 NISCHQ9Y2I1 1504 aa18.61■□□□□ 0.57
PDZD9-202ENST00000523914 POTEDQ86YR6 584 aa18.47■□□□□ 0.55
PDZD9-202ENST00000523914 MAPK8IP2Q13387 824 aaPredicted RBP18.32■□□□□ 0.52
PDZD9-202ENST00000523914 PPP4R3CPQ6ZMV5 832 aa18.26■□□□□ 0.51
PDZD9-202ENST00000523914 SCAF1Q9H7N4 1312 aaKnown RBP18.25■□□□□ 0.51
PDZD9-202ENST00000523914 DMRT2Q9Y5R5 561 aa18.09■□□□□ 0.49
PDZD9-202ENST00000523914 CNKSR2Q8WXI2 1034 aa17.8■□□□□ 0.44
PDZD9-202ENST00000523914 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
PDZD9-202ENST00000523914 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
PDZD9-202ENST00000523914 RNF216Q9NWF9 866 aaPredicted RBP17.55■□□□□ 0.4
PDZD9-202ENST00000523914 KCNA4P22459 653 aa17.48■□□□□ 0.39
PDZD9-202ENST00000523914 NPM3O75607 178 aaKnown RBP17.44■□□□□ 0.38
PDZD9-202ENST00000523914 DCAF8L1A6NGE4 600 aa17.27■□□□□ 0.36
PDZD9-202ENST00000523914 ABCC9O60706 1549 aa17.14■□□□□ 0.33
PDZD9-202ENST00000523914 DNAJC5BQ9UF47 199 aa16.98■□□□□ 0.31
PDZD9-202ENST00000523914 RNF39Q9H2S5 420 aa16.79■□□□□ 0.28
PDZD9-202ENST00000523914 CCDC180Q9P1Z9 1646 aa16.72■□□□□ 0.27
PDZD9-202ENST00000523914 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.71■□□□□ 0.27
PDZD9-202ENST00000523914 SLC4A2P04920 1241 aa16.58■□□□□ 0.24
PDZD9-202ENST00000523914 CACNB1Q02641 598 aaPredicted RBP16.55■□□□□ 0.24
PDZD9-202ENST00000523914 SLC4A1APQ9BWU0 796 aaKnown RBP16.54■□□□□ 0.24
PDZD9-202ENST00000523914 C1QBPQ07021 282 aaKnown RBP16.52■□□□□ 0.24
PDZD9-202ENST00000523914 U3KPZ7 1027 aaPredicted RBP16.46■□□□□ 0.23
PDZD9-202ENST00000523914 FOXD4L1Q9NU39 408 aa16.15■□□□□ 0.18
PDZD9-202ENST00000523914 ZBTB22O15209 634 aa16.12■□□□□ 0.17
PDZD9-202ENST00000523914 SPINK5Q9NQ38 1064 aaPredicted RBP16.11■□□□□ 0.17
PDZD9-202ENST00000523914 RB1CC1Q8TDY2 1594 aa16.1■□□□□ 0.17
PDZD9-202ENST00000523914 DCAF8L2P0C7V8 631 aa16.1■□□□□ 0.17
PDZD9-202ENST00000523914 MYCNP04198 464 aaPredicted RBP16.08■□□□□ 0.16
PDZD9-202ENST00000523914 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.04■□□□□ 0.16
PDZD9-202ENST00000523914 HNRNPUL2Q1KMD3 747 aaKnown RBP16.04■□□□□ 0.16
PDZD9-202ENST00000523914 CAPN15O75808 1086 aa16■□□□□ 0.15
PDZD9-202ENST00000523914 SAMD1Q6SPF0 538 aaPredicted RBP15.99■□□□□ 0.15
PDZD9-202ENST00000523914 PABPN1Q86U42 306 aaKnown RBP eCLIP15.99■□□□□ 0.15
PDZD9-202ENST00000523914 APLP2Q06481 763 aa15.93■□□□□ 0.14
PDZD9-202ENST00000523914 NACADO15069 1562 aa15.91■□□□□ 0.14
PDZD9-202ENST00000523914 TRHP20396 242 aaPredicted RBP15.86■□□□□ 0.13
PDZD9-202ENST00000523914 DSG3P32926 999 aa15.86■□□□□ 0.13
PDZD9-202ENST00000523914 ZNF219Q9P2Y4 722 aaPredicted RBP15.82■□□□□ 0.12
PDZD9-202ENST00000523914 ATF5Q9Y2D1 282 aaPredicted RBP15.76■□□□□ 0.11
PDZD9-202ENST00000523914 CSRNP3Q8WYN3 585 aa15.71■□□□□ 0.11
PDZD9-202ENST00000523914 ABCB7O75027 752 aa15.7■□□□□ 0.1
PDZD9-202ENST00000523914 UNC13AQ9UPW8 1703 aa15.7■□□□□ 0.1
PDZD9-202ENST00000523914 EHMT2Q96KQ7 1210 aa15.69■□□□□ 0.1
PDZD9-202ENST00000523914 BICRAQ9NZM4 1560 aa15.61■□□□□ 0.09
PDZD9-202ENST00000523914 ATXN8OSP0DMR3 200 aa15.6■□□□□ 0.09
PDZD9-202ENST00000523914 POLA2Q14181 598 aa15.53■□□□□ 0.08
PDZD9-202ENST00000523914 MYO15BQ96JP2 1530 aa15.53■□□□□ 0.08
PDZD9-202ENST00000523914 CECR2Q9BXF3 1484 aa15.43■□□□□ 0.06
PDZD9-202ENST00000523914 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
PDZD9-202ENST00000523914 SCRIBQ14160 1630 aa15.35■□□□□ 0.05
PDZD9-202ENST00000523914 DNAJC5Q9H3Z4 198 aa15.35■□□□□ 0.05
PDZD9-202ENST00000523914 ZCCHC6Q5VYS8 1495 aaKnown RBP15.34■□□□□ 0.05
PDZD9-202ENST00000523914 SHROOM4Q9ULL8 1493 aa15.3■□□□□ 0.04
PDZD9-202ENST00000523914 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
PDZD9-202ENST00000523914 DCAF1Q9Y4B6 1507 aa15.26■□□□□ 0.03
PDZD9-202ENST00000523914 ZBTB12Q9Y330 459 aaPredicted RBP15.19■□□□□ 0.02
PDZD9-202ENST00000523914 MKRN4PQ13434 485 aaPredicted RBP15.05■□□□□ -0
PDZD9-202ENST00000523914 RBM42Q9BTD8 480 aaKnown RBP15.05■□□□□ -0
PDZD9-202ENST00000523914 OSCARQ8IYS5 282 aa15.04■□□□□ -0
PDZD9-202ENST00000523914 FBLN2P98095 1184 aa15.01□□□□□ -0.01
PDZD9-202ENST00000523914 AKT1S1Q96B36 256 aa14.83□□□□□ -0.04
PDZD9-202ENST00000523914 ERCC6Q03468 1493 aa14.82□□□□□ -0.04
PDZD9-202ENST00000523914 SPDYE2BA6NHP3 402 aa14.79□□□□□ -0.04
PDZD9-202ENST00000523914 SPDYE6P0CI01 402 aa14.79□□□□□ -0.04
PDZD9-202ENST00000523914 SPDYE2Q495Y8 402 aa14.79□□□□□ -0.04
PDZD9-202ENST00000523914 CUX2O14529 1486 aa14.76□□□□□ -0.05
PDZD9-202ENST00000523914 REM2Q8IYK8 340 aaPredicted RBP14.71□□□□□ -0.05
PDZD9-202ENST00000523914 NCAPD3P42695 1498 aa14.71□□□□□ -0.06
PDZD9-202ENST00000523914 ZNF692Q9BU19 519 aaPredicted RBP14.68□□□□□ -0.06
PDZD9-202ENST00000523914 SSUH2Q9Y2M2 353 aa14.68□□□□□ -0.06
PDZD9-202ENST00000523914 ATAD2BQ9ULI0 1458 aa14.66□□□□□ -0.06
PDZD9-202ENST00000523914 NESP48681 1621 aa14.63□□□□□ -0.07
PDZD9-202ENST00000523914 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
PDZD9-202ENST00000523914 SMARCA2P51531 1590 aa14.57□□□□□ -0.08
PDZD9-202ENST00000523914 SMARCA4P51532 1647 aa14.56□□□□□ -0.08
PDZD9-202ENST00000523914 PITPNM1O00562 1244 aa14.55□□□□□ -0.08
PDZD9-202ENST00000523914 HMGXB3Q12766 1538 aa14.54□□□□□ -0.08
PDZD9-202ENST00000523914 POTEHQ6S545 545 aa14.53□□□□□ -0.08
PDZD9-202ENST00000523914 BAZ1BQ9UIG0 1483 aaKnown RBP14.52□□□□□ -0.08
PDZD9-202ENST00000523914 TRIM41Q8WV44 630 aa14.5□□□□□ -0.09
PDZD9-202ENST00000523914 SPDYE4A6NLX3 237 aa14.49□□□□□ -0.09
PDZD9-202ENST00000523914 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
PDZD9-202ENST00000523914 SPDYE1Q8NFV5 336 aaPredicted RBP14.43□□□□□ -0.1
PDZD9-202ENST00000523914 THOC2Q8NI27 1593 aaKnown RBP14.43□□□□□ -0.1
PDZD9-202ENST00000523914 LAMC3Q9Y6N6 1575 aa14.4□□□□□ -0.1
PDZD9-202ENST00000523914 PDS5BQ9NTI5 1447 aa14.39□□□□□ -0.11
PDZD9-202ENST00000523914 KIF21AQ7Z4S6 1674 aa14.38□□□□□ -0.11
PDZD9-202ENST00000523914 CLEC11AQ9Y240 323 aa14.38□□□□□ -0.11
PDZD9-202ENST00000523914 PIP4P2Q8N4L2 257 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms