RNA–Protein interactions for RNA: ENST00000522001.1

RP1-203, Transcript of RP1, axonemal microtubule associated, humanhuman

TSL 3

Gene RP1, Length 666 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RP1-203ENST00000522001 AEBP2Q6ZN18 517 aaPredicted RBP29.92■■■□□ 2.38
RP1-203ENST00000522001 CHIC1Q5VXU3 224 aa28.63■■■□□ 2.17
RP1-203ENST00000522001 SENP3Q9H4L4 574 aaPredicted RBP25.43■■□□□ 1.66
RP1-203ENST00000522001 PHF23Q9BUL5 403 aaPredicted RBP25.15■■□□□ 1.62
RP1-203ENST00000522001 FOXD1Q16676 465 aa23.7■■□□□ 1.38
RP1-203ENST00000522001 PLPPR3Q6T4P5 718 aa22.96■■□□□ 1.27
RP1-203ENST00000522001 PPP6R1Q9UPN7 881 aa22.37■■□□□ 1.17
RP1-203ENST00000522001 ADRA2BP18089 450 aa22.28■■□□□ 1.16
RP1-203ENST00000522001 PIAS4Q8N2W9 510 aaPredicted RBP22.16■■□□□ 1.14
RP1-203ENST00000522001 MSH5O43196 834 aa22.04■■□□□ 1.12
RP1-203ENST00000522001 NISCHQ9Y2I1 1504 aa21.66■■□□□ 1.06
RP1-203ENST00000522001 POTEDQ86YR6 584 aa21.29■■□□□ 1
RP1-203ENST00000522001 MAPK8IP2Q13387 824 aaPredicted RBP20.39■□□□□ 0.85
RP1-203ENST00000522001 SCAF1Q9H7N4 1312 aaKnown RBP20.33■□□□□ 0.85
RP1-203ENST00000522001 DMRT2Q9Y5R5 561 aa20.23■□□□□ 0.83
RP1-203ENST00000522001 PPP4R3CPQ6ZMV5 832 aa20.16■□□□□ 0.82
RP1-203ENST00000522001 ABCC9O60706 1549 aa19.91■□□□□ 0.78
RP1-203ENST00000522001 CNKSR2Q8WXI2 1034 aa19.73■□□□□ 0.75
RP1-203ENST00000522001 CCDC180Q9P1Z9 1646 aa19.68■□□□□ 0.74
RP1-203ENST00000522001 HOXD11P31277 338 aaPredicted RBP19.6■□□□□ 0.73
RP1-203ENST00000522001 RNF216Q9NWF9 866 aaPredicted RBP19.5■□□□□ 0.71
RP1-203ENST00000522001 NCBP3Q53F19 620 aaKnown RBP19.43■□□□□ 0.7
RP1-203ENST00000522001 DCAF8L1A6NGE4 600 aa19.28■□□□□ 0.68
RP1-203ENST00000522001 NPM3O75607 178 aaKnown RBP19.2■□□□□ 0.66
RP1-203ENST00000522001 DNAJC5BQ9UF47 199 aa19.08■□□□□ 0.64
RP1-203ENST00000522001 KCNA4P22459 653 aa19.06■□□□□ 0.64
RP1-203ENST00000522001 RNF39Q9H2S5 420 aa18.87■□□□□ 0.61
RP1-203ENST00000522001 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
RP1-203ENST00000522001 CACNB1Q02641 598 aaPredicted RBP18.73■□□□□ 0.59
RP1-203ENST00000522001 UNC13AQ9UPW8 1703 aa18.61■□□□□ 0.57
RP1-203ENST00000522001 NACADO15069 1562 aa18.61■□□□□ 0.57
RP1-203ENST00000522001 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.59■□□□□ 0.57
RP1-203ENST00000522001 C1QBPQ07021 282 aaKnown RBP18.58■□□□□ 0.56
RP1-203ENST00000522001 BICRAQ9NZM4 1560 aa18.42■□□□□ 0.54
RP1-203ENST00000522001 PABPN1Q86U42 306 aaKnown RBP eCLIP18.41■□□□□ 0.54
RP1-203ENST00000522001 SLC4A2P04920 1241 aa18.3■□□□□ 0.52
RP1-203ENST00000522001 U3KPZ7 1027 aaPredicted RBP18.29■□□□□ 0.52
RP1-203ENST00000522001 MYO15BQ96JP2 1530 aa18.28■□□□□ 0.52
RP1-203ENST00000522001 DCAF8L2P0C7V8 631 aa18.17■□□□□ 0.5
RP1-203ENST00000522001 CC2D2AQ9P2K1 1620 aa18.05■□□□□ 0.48
RP1-203ENST00000522001 SHROOM4Q9ULL8 1493 aa18.02■□□□□ 0.48
RP1-203ENST00000522001 SLC4A1APQ9BWU0 796 aaKnown RBP18■□□□□ 0.47
RP1-203ENST00000522001 CECR2Q9BXF3 1484 aa17.97■□□□□ 0.47
RP1-203ENST00000522001 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
RP1-203ENST00000522001 EIF4G1Q04637 1599 aaKnown RBP17.91■□□□□ 0.46
RP1-203ENST00000522001 DCAF1Q9Y4B6 1507 aa17.9■□□□□ 0.46
RP1-203ENST00000522001 ZCCHC6Q5VYS8 1495 aaKnown RBP17.89■□□□□ 0.45
RP1-203ENST00000522001 CAPN15O75808 1086 aa17.84■□□□□ 0.45
RP1-203ENST00000522001 SCRIBQ14160 1630 aa17.81■□□□□ 0.44
RP1-203ENST00000522001 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.8■□□□□ 0.44
RP1-203ENST00000522001 HNRNPUL2Q1KMD3 747 aaKnown RBP17.8■□□□□ 0.44
RP1-203ENST00000522001 DSG3P32926 999 aa17.75■□□□□ 0.43
RP1-203ENST00000522001 MYCNP04198 464 aaPredicted RBP17.74■□□□□ 0.43
RP1-203ENST00000522001 APLP2Q06481 763 aa17.74■□□□□ 0.43
RP1-203ENST00000522001 SAMD1Q6SPF0 538 aaPredicted RBP17.73■□□□□ 0.43
RP1-203ENST00000522001 DNAJC5Q9H3Z4 198 aa17.73■□□□□ 0.43
RP1-203ENST00000522001 FOXD4L1Q9NU39 408 aa17.68■□□□□ 0.42
RP1-203ENST00000522001 TRHP20396 242 aaPredicted RBP17.62■□□□□ 0.41
RP1-203ENST00000522001 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
RP1-203ENST00000522001 ZBTB22O15209 634 aa17.56■□□□□ 0.4
RP1-203ENST00000522001 ABCB7O75027 752 aa17.47■□□□□ 0.39
RP1-203ENST00000522001 CUX2O14529 1486 aa17.34■□□□□ 0.37
RP1-203ENST00000522001 ATF5Q9Y2D1 282 aaPredicted RBP17.34■□□□□ 0.37
RP1-203ENST00000522001 POLA2Q14181 598 aa17.24■□□□□ 0.35
RP1-203ENST00000522001 NCAPD3P42695 1498 aa17.19■□□□□ 0.34
RP1-203ENST00000522001 ATXN8OSP0DMR3 200 aa17.14■□□□□ 0.33
RP1-203ENST00000522001 ERCC6Q03468 1493 aa17.13■□□□□ 0.33
RP1-203ENST00000522001 ATAD2BQ9ULI0 1458 aa17.07■□□□□ 0.32
RP1-203ENST00000522001 HMGXB3Q12766 1538 aa17.06■□□□□ 0.32
RP1-203ENST00000522001 NESP48681 1621 aa17.05■□□□□ 0.32
RP1-203ENST00000522001 THOC2Q8NI27 1593 aaKnown RBP17.03■□□□□ 0.32
RP1-203ENST00000522001 SMARCA4P51532 1647 aa17.01■□□□□ 0.31
RP1-203ENST00000522001 SMARCA2P51531 1590 aa16.98■□□□□ 0.31
RP1-203ENST00000522001 CSRNP3Q8WYN3 585 aa16.95■□□□□ 0.3
RP1-203ENST00000522001 ZBTB12Q9Y330 459 aaPredicted RBP16.9■□□□□ 0.3
RP1-203ENST00000522001 KIF21AQ7Z4S6 1674 aa16.9■□□□□ 0.3
RP1-203ENST00000522001 PEG3Q9GZU2 1588 aa16.89■□□□□ 0.29
RP1-203ENST00000522001 RBM42Q9BTD8 480 aaKnown RBP16.88■□□□□ 0.29
RP1-203ENST00000522001 LAMC3Q9Y6N6 1575 aa16.87■□□□□ 0.29
RP1-203ENST00000522001 BAZ1BQ9UIG0 1483 aaKnown RBP16.84■□□□□ 0.29
RP1-203ENST00000522001 BAZ1AQ9NRL2 1556 aaPredicted RBP16.81■□□□□ 0.28
RP1-203ENST00000522001 EHMT2Q96KQ7 1210 aa16.8■□□□□ 0.28
RP1-203ENST00000522001 MROH2BQ7Z745 1585 aa16.7■□□□□ 0.26
RP1-203ENST00000522001 OSCARQ8IYS5 282 aa16.68■□□□□ 0.26
RP1-203ENST00000522001 PDS5BQ9NTI5 1447 aa16.68■□□□□ 0.26
RP1-203ENST00000522001 TRIM41Q8WV44 630 aa16.67■□□□□ 0.26
RP1-203ENST00000522001 WDR62O43379 1518 aa16.65■□□□□ 0.26
RP1-203ENST00000522001 MRC2Q9UBG0 1479 aa16.62■□□□□ 0.25
RP1-203ENST00000522001 POTEHQ6S545 545 aa16.6■□□□□ 0.25
RP1-203ENST00000522001 CADPSQ9ULU8 1353 aa16.59■□□□□ 0.25
RP1-203ENST00000522001 AKT1S1Q96B36 256 aa16.58■□□□□ 0.24
RP1-203ENST00000522001 FBLN2P98095 1184 aa16.57■□□□□ 0.24
RP1-203ENST00000522001 MKRN4PQ13434 485 aaPredicted RBP16.57■□□□□ 0.24
RP1-203ENST00000522001 WIZO95785 1651 aa16.5■□□□□ 0.23
RP1-203ENST00000522001 CEP164Q9UPV0 1460 aa16.45■□□□□ 0.22
RP1-203ENST00000522001 CHRDL2Q6WN34 429 aa16.43■□□□□ 0.22
RP1-203ENST00000522001 REM2Q8IYK8 340 aaPredicted RBP16.42■□□□□ 0.22
RP1-203ENST00000522001 FANCD2Q9BXW9 1451 aa16.42■□□□□ 0.22
RP1-203ENST00000522001 SPDYE2BA6NHP3 402 aa16.41■□□□□ 0.22
RP1-203ENST00000522001 SPDYE6P0CI01 402 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms