RNA–Protein interactions for RNA: ENST00000521492.1

POLB-211, Transcript of DNA polymerase beta, humanhuman

TSL 2 BASIC

Gene POLB, Length 786 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLB-211ENST00000521492 AEBP2Q6ZN18 517 aaPredicted RBP27.28■■□□□ 1.96
POLB-211ENST00000521492 CHIC1Q5VXU3 224 aa25.85■■□□□ 1.73
POLB-211ENST00000521492 SENP3Q9H4L4 574 aaPredicted RBP23.21■■□□□ 1.31
POLB-211ENST00000521492 PHF23Q9BUL5 403 aaPredicted RBP22.94■■□□□ 1.26
POLB-211ENST00000521492 FOXD1Q16676 465 aa21.68■■□□□ 1.06
POLB-211ENST00000521492 PLPPR3Q6T4P5 718 aa20.61■□□□□ 0.89
POLB-211ENST00000521492 PPP6R1Q9UPN7 881 aa20.28■□□□□ 0.84
POLB-211ENST00000521492 MSH5O43196 834 aa20.25■□□□□ 0.83
POLB-211ENST00000521492 PIAS4Q8N2W9 510 aaPredicted RBP20.21■□□□□ 0.83
POLB-211ENST00000521492 ADRA2BP18089 450 aa20.18■□□□□ 0.82
POLB-211ENST00000521492 NISCHQ9Y2I1 1504 aa19.98■□□□□ 0.79
POLB-211ENST00000521492 POTEDQ86YR6 584 aa19.85■□□□□ 0.77
POLB-211ENST00000521492 MAPK8IP2Q13387 824 aaPredicted RBP18.56■□□□□ 0.56
POLB-211ENST00000521492 DMRT2Q9Y5R5 561 aa18.42■□□□□ 0.54
POLB-211ENST00000521492 SCAF1Q9H7N4 1312 aaKnown RBP18.41■□□□□ 0.54
POLB-211ENST00000521492 PPP4R3CPQ6ZMV5 832 aa18.08■□□□□ 0.48
POLB-211ENST00000521492 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
POLB-211ENST00000521492 HOXD11P31277 338 aaPredicted RBP17.76■□□□□ 0.43
POLB-211ENST00000521492 CNKSR2Q8WXI2 1034 aa17.74■□□□□ 0.43
POLB-211ENST00000521492 ABCC9O60706 1549 aa17.64■□□□□ 0.41
POLB-211ENST00000521492 DCAF8L1A6NGE4 600 aa17.61■□□□□ 0.41
POLB-211ENST00000521492 RNF216Q9NWF9 866 aaPredicted RBP17.59■□□□□ 0.41
POLB-211ENST00000521492 CACNB1Q02641 598 aaPredicted RBP17.39■□□□□ 0.37
POLB-211ENST00000521492 NCBP3Q53F19 620 aaKnown RBP17.33■□□□□ 0.36
POLB-211ENST00000521492 RNF39Q9H2S5 420 aa17.31■□□□□ 0.36
POLB-211ENST00000521492 NPM3O75607 178 aaKnown RBP17.14■□□□□ 0.33
POLB-211ENST00000521492 DNAJC5BQ9UF47 199 aa17.14■□□□□ 0.33
POLB-211ENST00000521492 C1QBPQ07021 282 aaKnown RBP17.03■□□□□ 0.32
POLB-211ENST00000521492 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.85■□□□□ 0.29
POLB-211ENST00000521492 RB1CC1Q8TDY2 1594 aa16.85■□□□□ 0.29
POLB-211ENST00000521492 NACADO15069 1562 aa16.8■□□□□ 0.28
POLB-211ENST00000521492 DCAF8L2P0C7V8 631 aa16.79■□□□□ 0.28
POLB-211ENST00000521492 KCNA4P22459 653 aa16.79■□□□□ 0.28
POLB-211ENST00000521492 MYO15BQ96JP2 1530 aa16.66■□□□□ 0.26
POLB-211ENST00000521492 ZCCHC6Q5VYS8 1495 aaKnown RBP16.61■□□□□ 0.25
POLB-211ENST00000521492 U3KPZ7 1027 aaPredicted RBP16.55■□□□□ 0.24
POLB-211ENST00000521492 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
POLB-211ENST00000521492 PABPN1Q86U42 306 aaKnown RBP eCLIP16.48■□□□□ 0.23
POLB-211ENST00000521492 SLC4A2P04920 1241 aa16.4■□□□□ 0.22
POLB-211ENST00000521492 BICRAQ9NZM4 1560 aa16.37■□□□□ 0.21
POLB-211ENST00000521492 UNC13AQ9UPW8 1703 aa16.36■□□□□ 0.21
POLB-211ENST00000521492 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
POLB-211ENST00000521492 CAPN15O75808 1086 aa16.24■□□□□ 0.19
POLB-211ENST00000521492 SCRIBQ14160 1630 aa16.23■□□□□ 0.19
POLB-211ENST00000521492 DSG3P32926 999 aa16.2■□□□□ 0.18
POLB-211ENST00000521492 SHROOM4Q9ULL8 1493 aa16.18■□□□□ 0.18
POLB-211ENST00000521492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16■□□□□ 0.15
POLB-211ENST00000521492 APLP2Q06481 763 aa16■□□□□ 0.15
POLB-211ENST00000521492 HNRNPUL2Q1KMD3 747 aaKnown RBP16■□□□□ 0.15
POLB-211ENST00000521492 TRHP20396 242 aaPredicted RBP15.99■□□□□ 0.15
POLB-211ENST00000521492 ZNF219Q9P2Y4 722 aaPredicted RBP15.95■□□□□ 0.14
POLB-211ENST00000521492 EIF4G1Q04637 1599 aaKnown RBP15.94■□□□□ 0.14
POLB-211ENST00000521492 SAMD1Q6SPF0 538 aaPredicted RBP15.92■□□□□ 0.14
POLB-211ENST00000521492 CC2D2AQ9P2K1 1620 aa15.91■□□□□ 0.14
POLB-211ENST00000521492 ABCB7O75027 752 aa15.89■□□□□ 0.13
POLB-211ENST00000521492 CECR2Q9BXF3 1484 aa15.87■□□□□ 0.13
POLB-211ENST00000521492 MYCNP04198 464 aaPredicted RBP15.82■□□□□ 0.12
POLB-211ENST00000521492 SLC4A1APQ9BWU0 796 aaKnown RBP15.81■□□□□ 0.12
POLB-211ENST00000521492 FOXD4L1Q9NU39 408 aa15.65■□□□□ 0.1
POLB-211ENST00000521492 POLA2Q14181 598 aa15.57■□□□□ 0.08
POLB-211ENST00000521492 NCAPD3P42695 1498 aa15.54■□□□□ 0.08
POLB-211ENST00000521492 POTEHQ6S545 545 aa15.53■□□□□ 0.08
POLB-211ENST00000521492 ATF5Q9Y2D1 282 aaPredicted RBP15.52■□□□□ 0.08
POLB-211ENST00000521492 ATAD2BQ9ULI0 1458 aa15.52■□□□□ 0.07
POLB-211ENST00000521492 SMARCA4P51532 1647 aa15.51■□□□□ 0.07
POLB-211ENST00000521492 BAZ1AQ9NRL2 1556 aaPredicted RBP15.49■□□□□ 0.07
POLB-211ENST00000521492 ZBTB22O15209 634 aa15.47■□□□□ 0.07
POLB-211ENST00000521492 SMARCA2P51531 1590 aa15.45■□□□□ 0.06
POLB-211ENST00000521492 RBM42Q9BTD8 480 aaKnown RBP15.41■□□□□ 0.06
POLB-211ENST00000521492 HMGXB3Q12766 1538 aa15.41■□□□□ 0.06
POLB-211ENST00000521492 MROH2BQ7Z745 1585 aa15.41■□□□□ 0.06
POLB-211ENST00000521492 PEG3Q9GZU2 1588 aa15.38■□□□□ 0.05
POLB-211ENST00000521492 BAZ1BQ9UIG0 1483 aaKnown RBP15.36■□□□□ 0.05
POLB-211ENST00000521492 NESP48681 1621 aa15.21■□□□□ 0.03
POLB-211ENST00000521492 ZBTB12Q9Y330 459 aaPredicted RBP15.2■□□□□ 0.02
POLB-211ENST00000521492 ERCC6Q03468 1493 aa15.2■□□□□ 0.02
POLB-211ENST00000521492 RSF1Q96T23 1441 aaPredicted RBP15.18■□□□□ 0.02
POLB-211ENST00000521492 WIZO95785 1651 aa15.18■□□□□ 0.02
POLB-211ENST00000521492 ATXN8OSP0DMR3 200 aa15.17■□□□□ 0.02
POLB-211ENST00000521492 CHRDL2Q6WN34 429 aa15.11■□□□□ 0.01
POLB-211ENST00000521492 LAMC3Q9Y6N6 1575 aa15.11■□□□□ 0.01
POLB-211ENST00000521492 CUX2O14529 1486 aa15.1■□□□□ 0.01
POLB-211ENST00000521492 CADPSQ9ULU8 1353 aa15.09■□□□□ 0.01
POLB-211ENST00000521492 OSCARQ8IYS5 282 aa15.07■□□□□ 0
POLB-211ENST00000521492 AKT1S1Q96B36 256 aa15.07■□□□□ 0
POLB-211ENST00000521492 PDS5BQ9NTI5 1447 aa15.05■□□□□ -0
POLB-211ENST00000521492 TOP2AP11388 1531 aaKnown RBP15.04■□□□□ -0
POLB-211ENST00000521492 THOC2Q8NI27 1593 aaKnown RBP14.98□□□□□ -0.01
POLB-211ENST00000521492 CFTRP13569 1480 aa14.95□□□□□ -0.02
POLB-211ENST00000521492 REM2Q8IYK8 340 aaPredicted RBP14.95□□□□□ -0.02
POLB-211ENST00000521492 KIF21AQ7Z4S6 1674 aa14.93□□□□□ -0.02
POLB-211ENST00000521492 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
POLB-211ENST00000521492 DNAJC5Q9H3Z4 198 aa14.9□□□□□ -0.02
POLB-211ENST00000521492 FANCD2Q9BXW9 1451 aa14.89□□□□□ -0.03
POLB-211ENST00000521492 CCDC88BA6NC98 1476 aa14.89□□□□□ -0.03
POLB-211ENST00000521492 CEP164Q9UPV0 1460 aa14.88□□□□□ -0.03
POLB-211ENST00000521492 WDR62O43379 1518 aa14.85□□□□□ -0.03
POLB-211ENST00000521492 FBLN2P98095 1184 aa14.82□□□□□ -0.04
POLB-211ENST00000521492 MKRN4PQ13434 485 aaPredicted RBP14.8□□□□□ -0.04
POLB-211ENST00000521492 PITPNM1O00562 1244 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms