RNA–Protein interactions for RNA: ENST00000520966.1

GRIA1-212, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 4

Gene GRIA1, Length 560 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-212ENST00000520966 AEBP2Q6ZN18 517 aaPredicted RBP20.47■□□□□ 0.87
GRIA1-212ENST00000520966 CHIC1Q5VXU3 224 aa19.88■□□□□ 0.77
GRIA1-212ENST00000520966 SENP3Q9H4L4 574 aaPredicted RBP17.56■□□□□ 0.4
GRIA1-212ENST00000520966 PHF23Q9BUL5 403 aaPredicted RBP17.38■□□□□ 0.37
GRIA1-212ENST00000520966 FOXD1Q16676 465 aa16.21■□□□□ 0.19
GRIA1-212ENST00000520966 PLPPR3Q6T4P5 718 aa16.09■□□□□ 0.17
GRIA1-212ENST00000520966 NISCHQ9Y2I1 1504 aa15.43■□□□□ 0.06
GRIA1-212ENST00000520966 PPP6R1Q9UPN7 881 aa15.37■□□□□ 0.05
GRIA1-212ENST00000520966 ADRA2BP18089 450 aa15.34■□□□□ 0.05
GRIA1-212ENST00000520966 PIAS4Q8N2W9 510 aaPredicted RBP15.24■□□□□ 0.03
GRIA1-212ENST00000520966 MSH5O43196 834 aa15.17■□□□□ 0.02
GRIA1-212ENST00000520966 SCAF1Q9H7N4 1312 aaKnown RBP14.24□□□□□ -0.13
GRIA1-212ENST00000520966 PPP4R3CPQ6ZMV5 832 aa14.08□□□□□ -0.16
GRIA1-212ENST00000520966 POTEDQ86YR6 584 aa14.08□□□□□ -0.16
GRIA1-212ENST00000520966 DMRT2Q9Y5R5 561 aa13.96□□□□□ -0.17
GRIA1-212ENST00000520966 MAPK8IP2Q13387 824 aaPredicted RBP13.95□□□□□ -0.18
GRIA1-212ENST00000520966 CCDC180Q9P1Z9 1646 aa13.83□□□□□ -0.2
GRIA1-212ENST00000520966 CNKSR2Q8WXI2 1034 aa13.8□□□□□ -0.2
GRIA1-212ENST00000520966 NCBP3Q53F19 620 aaKnown RBP13.75□□□□□ -0.21
GRIA1-212ENST00000520966 HOXD11P31277 338 aaPredicted RBP13.61□□□□□ -0.23
GRIA1-212ENST00000520966 RNF216Q9NWF9 866 aaPredicted RBP13.6□□□□□ -0.23
GRIA1-212ENST00000520966 KCNA4P22459 653 aa13.44□□□□□ -0.26
GRIA1-212ENST00000520966 NPM3O75607 178 aaKnown RBP13.43□□□□□ -0.26
GRIA1-212ENST00000520966 DNAJC5BQ9UF47 199 aa13.31□□□□□ -0.28
GRIA1-212ENST00000520966 DCAF8L1A6NGE4 600 aa13.22□□□□□ -0.29
GRIA1-212ENST00000520966 ABCC9O60706 1549 aa13.12□□□□□ -0.31
GRIA1-212ENST00000520966 RNF39Q9H2S5 420 aa12.93□□□□□ -0.34
GRIA1-212ENST00000520966 ZCCHC6Q5VYS8 1495 aaKnown RBP12.91□□□□□ -0.34
GRIA1-212ENST00000520966 MYO15BQ96JP2 1530 aa12.89□□□□□ -0.35
GRIA1-212ENST00000520966 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.89□□□□□ -0.35
GRIA1-212ENST00000520966 DCAF1Q9Y4B6 1507 aa12.88□□□□□ -0.35
GRIA1-212ENST00000520966 NACADO15069 1562 aa12.86□□□□□ -0.35
GRIA1-212ENST00000520966 RB1CC1Q8TDY2 1594 aa12.82□□□□□ -0.36
GRIA1-212ENST00000520966 C1QBPQ07021 282 aaKnown RBP12.82□□□□□ -0.36
GRIA1-212ENST00000520966 SLC4A1APQ9BWU0 796 aaKnown RBP12.81□□□□□ -0.36
GRIA1-212ENST00000520966 UNC13AQ9UPW8 1703 aa12.74□□□□□ -0.37
GRIA1-212ENST00000520966 SLC4A2P04920 1241 aa12.72□□□□□ -0.37
GRIA1-212ENST00000520966 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
GRIA1-212ENST00000520966 U3KPZ7 1027 aaPredicted RBP12.65□□□□□ -0.38
GRIA1-212ENST00000520966 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.57□□□□□ -0.4
GRIA1-212ENST00000520966 HNRNPUL2Q1KMD3 747 aaKnown RBP12.57□□□□□ -0.4
GRIA1-212ENST00000520966 APLP2Q06481 763 aa12.52□□□□□ -0.41
GRIA1-212ENST00000520966 FOXD4L1Q9NU39 408 aa12.52□□□□□ -0.41
GRIA1-212ENST00000520966 DCAF8L2P0C7V8 631 aa12.5□□□□□ -0.41
GRIA1-212ENST00000520966 MYCNP04198 464 aaPredicted RBP12.49□□□□□ -0.41
GRIA1-212ENST00000520966 BICRAQ9NZM4 1560 aa12.48□□□□□ -0.41
GRIA1-212ENST00000520966 SAMD1Q6SPF0 538 aaPredicted RBP12.47□□□□□ -0.41
GRIA1-212ENST00000520966 SCRIBQ14160 1630 aa12.44□□□□□ -0.42
GRIA1-212ENST00000520966 SHROOM4Q9ULL8 1493 aa12.39□□□□□ -0.43
GRIA1-212ENST00000520966 ZBTB22O15209 634 aa12.33□□□□□ -0.44
GRIA1-212ENST00000520966 CAPN15O75808 1086 aa12.3□□□□□ -0.44
GRIA1-212ENST00000520966 SPINK5Q9NQ38 1064 aaPredicted RBP12.3□□□□□ -0.44
GRIA1-212ENST00000520966 ZNF219Q9P2Y4 722 aaPredicted RBP12.29□□□□□ -0.44
GRIA1-212ENST00000520966 ATXN8OSP0DMR3 200 aa12.22□□□□□ -0.45
GRIA1-212ENST00000520966 DSG3P32926 999 aa12.19□□□□□ -0.46
GRIA1-212ENST00000520966 PABPN1Q86U42 306 aaKnown RBP eCLIP12.17□□□□□ -0.46
GRIA1-212ENST00000520966 TRHP20396 242 aaPredicted RBP12.16□□□□□ -0.46
GRIA1-212ENST00000520966 CSRNP3Q8WYN3 585 aa12.12□□□□□ -0.47
GRIA1-212ENST00000520966 EIF4G1Q04637 1599 aaKnown RBP12.09□□□□□ -0.47
GRIA1-212ENST00000520966 EHMT2Q96KQ7 1210 aa12.06□□□□□ -0.48
GRIA1-212ENST00000520966 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
GRIA1-212ENST00000520966 CC2D2AQ9P2K1 1620 aa12□□□□□ -0.49
GRIA1-212ENST00000520966 SMARCA4P51532 1647 aa12□□□□□ -0.49
GRIA1-212ENST00000520966 ABCB7O75027 752 aa11.97□□□□□ -0.49
GRIA1-212ENST00000520966 BAZ1AQ9NRL2 1556 aaPredicted RBP11.96□□□□□ -0.49
GRIA1-212ENST00000520966 POLA2Q14181 598 aa11.96□□□□□ -0.49
GRIA1-212ENST00000520966 PEG3Q9GZU2 1588 aa11.94□□□□□ -0.5
GRIA1-212ENST00000520966 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
GRIA1-212ENST00000520966 ZBTB12Q9Y330 459 aaPredicted RBP11.9□□□□□ -0.5
GRIA1-212ENST00000520966 MROH2BQ7Z745 1585 aa11.87□□□□□ -0.51
GRIA1-212ENST00000520966 SMARCA2P51531 1590 aa11.86□□□□□ -0.51
GRIA1-212ENST00000520966 HMGXB3Q12766 1538 aa11.84□□□□□ -0.51
GRIA1-212ENST00000520966 NCAPD3P42695 1498 aa11.82□□□□□ -0.52
GRIA1-212ENST00000520966 ATAD2BQ9ULI0 1458 aa11.81□□□□□ -0.52
GRIA1-212ENST00000520966 WIZO95785 1651 aa11.81□□□□□ -0.52
GRIA1-212ENST00000520966 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
GRIA1-212ENST00000520966 RBM42Q9BTD8 480 aaKnown RBP11.73□□□□□ -0.53
GRIA1-212ENST00000520966 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
GRIA1-212ENST00000520966 FBLN2P98095 1184 aa11.69□□□□□ -0.54
GRIA1-212ENST00000520966 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
GRIA1-212ENST00000520966 PRDM2Q13029 1718 aa11.62□□□□□ -0.55
GRIA1-212ENST00000520966 LAMC3Q9Y6N6 1575 aa11.54□□□□□ -0.56
GRIA1-212ENST00000520966 MKRN4PQ13434 485 aaPredicted RBP11.53□□□□□ -0.56
GRIA1-212ENST00000520966 OSCARQ8IYS5 282 aa11.52□□□□□ -0.57
GRIA1-212ENST00000520966 SPDYE2BA6NHP3 402 aa11.51□□□□□ -0.57
GRIA1-212ENST00000520966 SPDYE6P0CI01 402 aa11.51□□□□□ -0.57
GRIA1-212ENST00000520966 SPDYE2Q495Y8 402 aa11.51□□□□□ -0.57
GRIA1-212ENST00000520966 AKT1S1Q96B36 256 aa11.5□□□□□ -0.57
GRIA1-212ENST00000520966 KIF21AQ7Z4S6 1674 aa11.47□□□□□ -0.57
GRIA1-212ENST00000520966 CCDC88BA6NC98 1476 aa11.46□□□□□ -0.57
GRIA1-212ENST00000520966 CFTRP13569 1480 aa11.44□□□□□ -0.58
GRIA1-212ENST00000520966 NESP48681 1621 aa11.43□□□□□ -0.58
GRIA1-212ENST00000520966 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
GRIA1-212ENST00000520966 THOC2Q8NI27 1593 aaKnown RBP11.38□□□□□ -0.59
GRIA1-212ENST00000520966 SSUH2Q9Y2M2 353 aa11.36□□□□□ -0.59
GRIA1-212ENST00000520966 ZNF692Q9BU19 519 aaPredicted RBP11.35□□□□□ -0.59
GRIA1-212ENST00000520966 PDS5BQ9NTI5 1447 aa11.34□□□□□ -0.59
GRIA1-212ENST00000520966 SUPT5HO00267 1087 aaKnown RBP11.32□□□□□ -0.6
GRIA1-212ENST00000520966 REM2Q8IYK8 340 aaPredicted RBP11.32□□□□□ -0.6
GRIA1-212ENST00000520966 FANCD2Q9BXW9 1451 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms