RNA–Protein interactions for RNA: ENST00000519920.1

EFR3A-203, Transcript of EFR3 homolog A, humanhuman

TSL 5

Gene EFR3A, Length 770 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFR3A-203ENST00000519920 AEBP2Q6ZN18 517 aaPredicted RBP20.06■□□□□ 0.8
EFR3A-203ENST00000519920 CHIC1Q5VXU3 224 aa18.86■□□□□ 0.61
EFR3A-203ENST00000519920 SENP3Q9H4L4 574 aaPredicted RBP17.15■□□□□ 0.34
EFR3A-203ENST00000519920 PHF23Q9BUL5 403 aaPredicted RBP16.88■□□□□ 0.29
EFR3A-203ENST00000519920 FOXD1Q16676 465 aa16■□□□□ 0.15
EFR3A-203ENST00000519920 MSH5O43196 834 aa15.06■□□□□ 0
EFR3A-203ENST00000519920 POTEDQ86YR6 584 aa15.02■□□□□ -0
EFR3A-203ENST00000519920 PLPPR3Q6T4P5 718 aa14.98□□□□□ -0.01
EFR3A-203ENST00000519920 PIAS4Q8N2W9 510 aaPredicted RBP14.91□□□□□ -0.02
EFR3A-203ENST00000519920 PPP6R1Q9UPN7 881 aa14.8□□□□□ -0.04
EFR3A-203ENST00000519920 ADRA2BP18089 450 aa14.74□□□□□ -0.05
EFR3A-203ENST00000519920 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
EFR3A-203ENST00000519920 DMRT2Q9Y5R5 561 aa13.57□□□□□ -0.24
EFR3A-203ENST00000519920 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
EFR3A-203ENST00000519920 NISCHQ9Y2I1 1504 aa13.14□□□□□ -0.31
EFR3A-203ENST00000519920 PPP4R3CPQ6ZMV5 832 aa13.1□□□□□ -0.31
EFR3A-203ENST00000519920 CACNB1Q02641 598 aaPredicted RBP13.02□□□□□ -0.33
EFR3A-203ENST00000519920 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
EFR3A-203ENST00000519920 HOXD11P31277 338 aaPredicted RBP12.99□□□□□ -0.33
EFR3A-203ENST00000519920 CNKSR2Q8WXI2 1034 aa12.9□□□□□ -0.34
EFR3A-203ENST00000519920 RNF216Q9NWF9 866 aaPredicted RBP12.84□□□□□ -0.35
EFR3A-203ENST00000519920 RNF39Q9H2S5 420 aa12.83□□□□□ -0.36
EFR3A-203ENST00000519920 C1QBPQ07021 282 aaKnown RBP12.62□□□□□ -0.39
EFR3A-203ENST00000519920 DNAJC5BQ9UF47 199 aa12.58□□□□□ -0.4
EFR3A-203ENST00000519920 NCBP3Q53F19 620 aaKnown RBP12.53□□□□□ -0.4
EFR3A-203ENST00000519920 NPM3O75607 178 aaKnown RBP12.36□□□□□ -0.43
EFR3A-203ENST00000519920 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.36□□□□□ -0.43
EFR3A-203ENST00000519920 ABCC9O60706 1549 aa12.16□□□□□ -0.46
EFR3A-203ENST00000519920 U3KPZ7 1027 aaPredicted RBP12.1□□□□□ -0.47
EFR3A-203ENST00000519920 SPINK5Q9NQ38 1064 aaPredicted RBP11.98□□□□□ -0.49
EFR3A-203ENST00000519920 CAPN15O75808 1086 aa11.96□□□□□ -0.49
EFR3A-203ENST00000519920 KCNA4P22459 653 aa11.95□□□□□ -0.5
EFR3A-203ENST00000519920 DSG3P32926 999 aa11.94□□□□□ -0.5
EFR3A-203ENST00000519920 SLC4A2P04920 1241 aa11.85□□□□□ -0.51
EFR3A-203ENST00000519920 APLP2Q06481 763 aa11.74□□□□□ -0.53
EFR3A-203ENST00000519920 POTEHQ6S545 545 aa11.73□□□□□ -0.53
EFR3A-203ENST00000519920 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
EFR3A-203ENST00000519920 TRHP20396 242 aaPredicted RBP11.72□□□□□ -0.53
EFR3A-203ENST00000519920 ZNF219Q9P2Y4 722 aaPredicted RBP11.71□□□□□ -0.53
EFR3A-203ENST00000519920 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.68□□□□□ -0.54
EFR3A-203ENST00000519920 HNRNPUL2Q1KMD3 747 aaKnown RBP11.68□□□□□ -0.54
EFR3A-203ENST00000519920 ABCB7O75027 752 aa11.67□□□□□ -0.54
EFR3A-203ENST00000519920 SAMD1Q6SPF0 538 aaPredicted RBP11.61□□□□□ -0.55
EFR3A-203ENST00000519920 MYCNP04198 464 aaPredicted RBP11.45□□□□□ -0.58
EFR3A-203ENST00000519920 PABPN1Q86U42 306 aaKnown RBP eCLIP11.41□□□□□ -0.58
EFR3A-203ENST00000519920 RBM42Q9BTD8 480 aaKnown RBP11.41□□□□□ -0.58
EFR3A-203ENST00000519920 DCAF8L2P0C7V8 631 aa11.4□□□□□ -0.58
EFR3A-203ENST00000519920 RB1CC1Q8TDY2 1594 aa11.38□□□□□ -0.59
EFR3A-203ENST00000519920 POLA2Q14181 598 aa11.35□□□□□ -0.59
EFR3A-203ENST00000519920 NACADO15069 1562 aa11.27□□□□□ -0.61
EFR3A-203ENST00000519920 SLC4A1APQ9BWU0 796 aaKnown RBP11.24□□□□□ -0.61
EFR3A-203ENST00000519920 CHRDL2Q6WN34 429 aa11.23□□□□□ -0.61
EFR3A-203ENST00000519920 FOXD4L1Q9NU39 408 aa11.22□□□□□ -0.61
EFR3A-203ENST00000519920 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
EFR3A-203ENST00000519920 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
EFR3A-203ENST00000519920 AKT1S1Q96B36 256 aa11.1□□□□□ -0.63
EFR3A-203ENST00000519920 BICRAQ9NZM4 1560 aa11.07□□□□□ -0.64
EFR3A-203ENST00000519920 MYO15BQ96JP2 1530 aa11.04□□□□□ -0.64
EFR3A-203ENST00000519920 OSCARQ8IYS5 282 aa11.03□□□□□ -0.64
EFR3A-203ENST00000519920 ZBTB22O15209 634 aa10.99□□□□□ -0.65
EFR3A-203ENST00000519920 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
EFR3A-203ENST00000519920 CECR2Q9BXF3 1484 aa10.99□□□□□ -0.65
EFR3A-203ENST00000519920 DNAJC5Q9H3Z4 198 aa10.98□□□□□ -0.65
EFR3A-203ENST00000519920 UNC13AQ9UPW8 1703 aa10.98□□□□□ -0.65
EFR3A-203ENST00000519920 PIP4P2Q8N4L2 257 aa10.92□□□□□ -0.66
EFR3A-203ENST00000519920 SP7Q8TDD2 431 aaPredicted RBP10.91□□□□□ -0.66
EFR3A-203ENST00000519920 CC2D2AQ9P2K1 1620 aa10.89□□□□□ -0.67
EFR3A-203ENST00000519920 PITPNM1O00562 1244 aa10.89□□□□□ -0.67
EFR3A-203ENST00000519920 ATXN8OSP0DMR3 200 aa10.89□□□□□ -0.67
EFR3A-203ENST00000519920 SHROOM4Q9ULL8 1493 aa10.87□□□□□ -0.67
EFR3A-203ENST00000519920 FXR2P51116 673 aaKnown RBP eCLIP10.82□□□□□ -0.68
EFR3A-203ENST00000519920 EIF4G1Q04637 1599 aaKnown RBP10.82□□□□□ -0.68
EFR3A-203ENST00000519920 DCAF1Q9Y4B6 1507 aa10.8□□□□□ -0.68
EFR3A-203ENST00000519920 ZCCHC6Q5VYS8 1495 aaKnown RBP10.8□□□□□ -0.68
EFR3A-203ENST00000519920 FBLN2P98095 1184 aa10.77□□□□□ -0.69
EFR3A-203ENST00000519920 SCRIBQ14160 1630 aa10.76□□□□□ -0.69
EFR3A-203ENST00000519920 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
EFR3A-203ENST00000519920 HAX1O00165 279 aa10.76□□□□□ -0.69
EFR3A-203ENST00000519920 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
EFR3A-203ENST00000519920 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
EFR3A-203ENST00000519920 MKRN4PQ13434 485 aaPredicted RBP10.67□□□□□ -0.7
EFR3A-203ENST00000519920 SPDYE1Q8NFV5 336 aaPredicted RBP10.62□□□□□ -0.71
EFR3A-203ENST00000519920 EVX2Q03828 476 aa10.61□□□□□ -0.71
EFR3A-203ENST00000519920 SSUH2Q9Y2M2 353 aa10.61□□□□□ -0.71
EFR3A-203ENST00000519920 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
EFR3A-203ENST00000519920 PRKAR2AP13861 404 aaKnown RBP10.59□□□□□ -0.71
EFR3A-203ENST00000519920 ZNF692Q9BU19 519 aaPredicted RBP10.59□□□□□ -0.71
EFR3A-203ENST00000519920 CUX2O14529 1486 aa10.55□□□□□ -0.72
EFR3A-203ENST00000519920 ERCC6Q03468 1493 aa10.51□□□□□ -0.73
EFR3A-203ENST00000519920 NCAPD3P42695 1498 aa10.49□□□□□ -0.73
EFR3A-203ENST00000519920 C19orf67A6NJJ6 358 aa10.48□□□□□ -0.73
EFR3A-203ENST00000519920 CHADLQ6NUI6 762 aa10.43□□□□□ -0.74
EFR3A-203ENST00000519920 ATAD2BQ9ULI0 1458 aa10.41□□□□□ -0.74
EFR3A-203ENST00000519920 PRR29P0C7W0 189 aa10.4□□□□□ -0.74
EFR3A-203ENST00000519920 TRIM41Q8WV44 630 aa10.39□□□□□ -0.75
EFR3A-203ENST00000519920 NESP48681 1621 aa10.37□□□□□ -0.75
EFR3A-203ENST00000519920 GABBR2O75899 941 aa10.37□□□□□ -0.75
EFR3A-203ENST00000519920 CSRNP3Q8WYN3 585 aa10.3□□□□□ -0.76
EFR3A-203ENST00000519920 SMARCA2P51531 1590 aa10.3□□□□□ -0.76
EFR3A-203ENST00000519920 HMGXB3Q12766 1538 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms