RNA–Protein interactions for RNA: ENST00000519890.5

EBF1-207, Transcript of early B cell factor 1, humanhuman

TSL 5

Gene EBF1, Length 4,695 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-207ENST00000519890 NISCHQ9Y2I1 1504 aa14.87□□□□□ -0.03
EBF1-207ENST00000519890 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
EBF1-207ENST00000519890 SHROOM4Q9ULL8 1493 aa13.3□□□□□ -0.28
EBF1-207ENST00000519890 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
EBF1-207ENST00000519890 ABCC9O60706 1549 aa13.13□□□□□ -0.31
EBF1-207ENST00000519890 PABPN1Q86U42 306 aaKnown RBP eCLIP12.74□□□□□ -0.37
EBF1-207ENST00000519890 FAM9AQ8IZU1 332 aaPredicted RBP12.67□□□□□ -0.38
EBF1-207ENST00000519890 CCDC180Q9P1Z9 1646 aa12.6□□□□□ -0.39
EBF1-207ENST00000519890 EHMT2Q96KQ7 1210 aa12.46□□□□□ -0.41
EBF1-207ENST00000519890 APLP2Q06481 763 aa12.37□□□□□ -0.43
EBF1-207ENST00000519890 RB1CC1Q8TDY2 1594 aa12.37□□□□□ -0.43
EBF1-207ENST00000519890 TRIM41Q8WV44 630 aa12.35□□□□□ -0.43
EBF1-207ENST00000519890 SCRIBQ14160 1630 aa12.28□□□□□ -0.44
EBF1-207ENST00000519890 ZCCHC6Q5VYS8 1495 aaKnown RBP12.28□□□□□ -0.44
EBF1-207ENST00000519890 NACADO15069 1562 aa12.25□□□□□ -0.45
EBF1-207ENST00000519890 RANGAP1P46060 587 aaPredicted RBP12.22□□□□□ -0.45
EBF1-207ENST00000519890 ATP1B4Q9UN42 357 aaPredicted RBP12.18□□□□□ -0.46
EBF1-207ENST00000519890 UBTFP17480 764 aaKnown RBP12.17□□□□□ -0.46
EBF1-207ENST00000519890 TTBK1Q5TCY1 1321 aaPredicted RBP12.05□□□□□ -0.48
EBF1-207ENST00000519890 FBLN2P98095 1184 aa12.01□□□□□ -0.49
EBF1-207ENST00000519890 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.01□□□□□ -0.49
EBF1-207ENST00000519890 HNRNPUL2Q1KMD3 747 aaKnown RBP12.01□□□□□ -0.49
EBF1-207ENST00000519890 DCAF1Q9Y4B6 1507 aa11.94□□□□□ -0.5
EBF1-207ENST00000519890 MYT1LQ9UL68 1186 aa11.91□□□□□ -0.5
EBF1-207ENST00000519890 MYO15BQ96JP2 1530 aa11.81□□□□□ -0.52
EBF1-207ENST00000519890 BAZ1BQ9UIG0 1483 aaKnown RBP11.81□□□□□ -0.52
EBF1-207ENST00000519890 ERCC6Q03468 1493 aa11.79□□□□□ -0.52
EBF1-207ENST00000519890 CHIC1Q5VXU3 224 aa11.75□□□□□ -0.53
EBF1-207ENST00000519890 BAZ1AQ9NRL2 1556 aaPredicted RBP11.72□□□□□ -0.53
EBF1-207ENST00000519890 NPM1P06748 294 aaKnown RBP eCLIP11.71□□□□□ -0.54
EBF1-207ENST00000519890 CHMP7Q8WUX9 453 aaPredicted RBP11.68□□□□□ -0.54
EBF1-207ENST00000519890 CECR2Q9BXF3 1484 aa11.67□□□□□ -0.54
EBF1-207ENST00000519890 RSF1Q96T23 1441 aaPredicted RBP11.65□□□□□ -0.54
EBF1-207ENST00000519890 SMARCA2P51531 1590 aa11.61□□□□□ -0.55
EBF1-207ENST00000519890 CSRNP3Q8WYN3 585 aa11.6□□□□□ -0.55
EBF1-207ENST00000519890 PDS5BQ9NTI5 1447 aa11.58□□□□□ -0.56
EBF1-207ENST00000519890 CDK11AQ9UQ88 783 aaPredicted RBP11.56□□□□□ -0.56
EBF1-207ENST00000519890 ITGAEP38570 1179 aa11.55□□□□□ -0.56
EBF1-207ENST00000519890 P3H3Q8IVL6 736 aa11.54□□□□□ -0.56
EBF1-207ENST00000519890 LOC105371045A0A1W2PR82 267 aa11.53□□□□□ -0.56
EBF1-207ENST00000519890 PCGF6Q9BYE7 350 aa11.52□□□□□ -0.57
EBF1-207ENST00000519890 PPARGC1BQ86YN6 1023 aaKnown RBP11.51□□□□□ -0.57
EBF1-207ENST00000519890 ARID3CA6NKF2 412 aa11.5□□□□□ -0.57
EBF1-207ENST00000519890 MROH2BQ7Z745 1585 aa11.44□□□□□ -0.58
EBF1-207ENST00000519890 WRNQ14191 1432 aaPredicted RBP eCLIP11.44□□□□□ -0.58
EBF1-207ENST00000519890 ATAD2BQ9ULI0 1458 aa11.44□□□□□ -0.58
EBF1-207ENST00000519890 ESF1Q9H501 851 aaKnown RBP11.43□□□□□ -0.58
EBF1-207ENST00000519890 CADPSQ9ULU8 1353 aa11.43□□□□□ -0.58
EBF1-207ENST00000519890 FAM50AQ14320 339 aaKnown RBP11.43□□□□□ -0.58
EBF1-207ENST00000519890 CCER1Q8TC90 406 aaPredicted RBP11.43□□□□□ -0.58
EBF1-207ENST00000519890 KIF27Q86VH2 1401 aa11.38□□□□□ -0.59
EBF1-207ENST00000519890 ZNF777Q9ULD5 760 aaPredicted RBP11.37□□□□□ -0.59
EBF1-207ENST00000519890 EIF4G1Q04637 1599 aaKnown RBP11.36□□□□□ -0.59
EBF1-207ENST00000519890 TRHP20396 242 aaPredicted RBP11.34□□□□□ -0.59
EBF1-207ENST00000519890 SMARCA4P51532 1647 aa11.33□□□□□ -0.6
EBF1-207ENST00000519890 CEP164Q9UPV0 1460 aa11.33□□□□□ -0.6
EBF1-207ENST00000519890 TRIM52Q96A61 297 aa11.32□□□□□ -0.6
EBF1-207ENST00000519890 CCDC88BA6NC98 1476 aa11.31□□□□□ -0.6
EBF1-207ENST00000519890 NCAPD3P42695 1498 aa11.31□□□□□ -0.6
EBF1-207ENST00000519890 EEA1Q15075 1411 aa11.3□□□□□ -0.6
EBF1-207ENST00000519890 SOGA1O94964 1423 aa11.29□□□□□ -0.6
EBF1-207ENST00000519890 TOP2AP11388 1531 aaKnown RBP11.29□□□□□ -0.6
EBF1-207ENST00000519890 PLEKHD1A6NEE1 506 aa11.28□□□□□ -0.6
EBF1-207ENST00000519890 KCNH8Q96L42 1107 aa11.27□□□□□ -0.6
EBF1-207ENST00000519890 CUX2O14529 1486 aa11.27□□□□□ -0.6
EBF1-207ENST00000519890 TDRD9Q8NDG6 1382 aaKnown RBP11.26□□□□□ -0.61
EBF1-207ENST00000519890 TRIM26Q12899 539 aaPredicted RBP11.26□□□□□ -0.61
EBF1-207ENST00000519890 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
EBF1-207ENST00000519890 DNAJC5BQ9UF47 199 aa11.25□□□□□ -0.61
EBF1-207ENST00000519890 FANCD2Q9BXW9 1451 aa11.25□□□□□ -0.61
EBF1-207ENST00000519890 BCANQ96GW7 911 aa11.24□□□□□ -0.61
EBF1-207ENST00000519890 PLPPR3Q6T4P5 718 aa11.24□□□□□ -0.61
EBF1-207ENST00000519890 ABCC8Q09428 1581 aa11.23□□□□□ -0.61
EBF1-207ENST00000519890 OSCARQ8IYS5 282 aa11.23□□□□□ -0.61
EBF1-207ENST00000519890 CC2D2AQ9P2K1 1620 aa11.23□□□□□ -0.61
EBF1-207ENST00000519890 WIZO95785 1651 aa11.22□□□□□ -0.61
EBF1-207ENST00000519890 CARMIL1Q5VZK9 1371 aa11.21□□□□□ -0.62
EBF1-207ENST00000519890 TSPY4P0CV99 314 aa11.2□□□□□ -0.62
EBF1-207ENST00000519890 TSPY10P0CW01 314 aa11.2□□□□□ -0.62
EBF1-207ENST00000519890 MTUS2Q5JR59 1369 aa11.2□□□□□ -0.62
EBF1-207ENST00000519890 STAG3Q9UJ98 1225 aa11.19□□□□□ -0.62
EBF1-207ENST00000519890 CARMIL2Q6F5E8 1435 aa11.18□□□□□ -0.62
EBF1-207ENST00000519890 POLR3GLQ9BT43 218 aa11.16□□□□□ -0.62
EBF1-207ENST00000519890 ARID4BQ4LE39 1312 aaPredicted RBP11.16□□□□□ -0.62
EBF1-207ENST00000519890 SLC4A1APQ9BWU0 796 aaKnown RBP11.14□□□□□ -0.63
EBF1-207ENST00000519890 GOLGA3Q08378 1498 aa11.14□□□□□ -0.63
EBF1-207ENST00000519890 CLIP1P30622 1438 aa11.14□□□□□ -0.63
EBF1-207ENST00000519890 BICRAQ9NZM4 1560 aa11.11□□□□□ -0.63
EBF1-207ENST00000519890 CHGAP10645 457 aaKnown RBP11.1□□□□□ -0.63
EBF1-207ENST00000519890 CYB5RLQ6IPT4 315 aa11.1□□□□□ -0.63
EBF1-207ENST00000519890 HMGXB3Q12766 1538 aa11.09□□□□□ -0.63
EBF1-207ENST00000519890 JPH4Q96JJ6 628 aa11.07□□□□□ -0.64
EBF1-207ENST00000519890 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.06□□□□□ -0.64
EBF1-207ENST00000519890 CFDP1Q9UEE9 299 aaPredicted RBP11.06□□□□□ -0.64
EBF1-207ENST00000519890 ZNF326Q5BKZ1 582 aaKnown RBP11.06□□□□□ -0.64
EBF1-207ENST00000519890 MRC2Q9UBG0 1479 aa11.05□□□□□ -0.64
EBF1-207ENST00000519890 NESP48681 1621 aa11.04□□□□□ -0.64
EBF1-207ENST00000519890 CHIC2Q9UKJ5 165 aa11.03□□□□□ -0.64
EBF1-207ENST00000519890 NEUROD1Q13562 356 aa11.02□□□□□ -0.65
EBF1-207ENST00000519890 FHAD1B1AJZ9 1412 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms