RNA–Protein interactions for RNA: ENST00000519486.5

SLIT3-205, Transcript of slit guidance ligand 3, humanhuman

TSL 1 (best)

Gene SLIT3, Length 4,228 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-205ENST00000519486 NISCHQ9Y2I1 1504 aa14.52□□□□□ -0.08
SLIT3-205ENST00000519486 DCAF8L2P0C7V8 631 aa14.25□□□□□ -0.13
SLIT3-205ENST00000519486 ABCC9O60706 1549 aa13.3□□□□□ -0.28
SLIT3-205ENST00000519486 SHROOM4Q9ULL8 1493 aa13.23□□□□□ -0.29
SLIT3-205ENST00000519486 SUPT5HO00267 1087 aaKnown RBP13.19□□□□□ -0.3
SLIT3-205ENST00000519486 PELP1Q8IZL8 1130 aaKnown RBP12.88□□□□□ -0.35
SLIT3-205ENST00000519486 PABPN1Q86U42 306 aaKnown RBP eCLIP12.78□□□□□ -0.36
SLIT3-205ENST00000519486 MYT1Q01538 1121 aa12.64□□□□□ -0.39
SLIT3-205ENST00000519486 FAM9AQ8IZU1 332 aaPredicted RBP12.63□□□□□ -0.39
SLIT3-205ENST00000519486 CCDC180Q9P1Z9 1646 aa12.55□□□□□ -0.4
SLIT3-205ENST00000519486 RB1CC1Q8TDY2 1594 aa12.51□□□□□ -0.41
SLIT3-205ENST00000519486 EHMT2Q96KQ7 1210 aa12.45□□□□□ -0.42
SLIT3-205ENST00000519486 PCGF6Q9BYE7 350 aa12.42□□□□□ -0.42
SLIT3-205ENST00000519486 CHIC1Q5VXU3 224 aa12.33□□□□□ -0.44
SLIT3-205ENST00000519486 HRCP23327 699 aa12.33□□□□□ -0.44
SLIT3-205ENST00000519486 NACADO15069 1562 aa12.31□□□□□ -0.44
SLIT3-205ENST00000519486 LOC105371045A0A1W2PR82 267 aa12.2□□□□□ -0.46
SLIT3-205ENST00000519486 TRIM41Q8WV44 630 aa12.17□□□□□ -0.46
SLIT3-205ENST00000519486 SCRIBQ14160 1630 aa12.14□□□□□ -0.47
SLIT3-205ENST00000519486 ZCCHC6Q5VYS8 1495 aaKnown RBP12.12□□□□□ -0.47
SLIT3-205ENST00000519486 ERCC6Q03468 1493 aa12.06□□□□□ -0.48
SLIT3-205ENST00000519486 PPARGC1BQ86YN6 1023 aaKnown RBP12.02□□□□□ -0.48
SLIT3-205ENST00000519486 TTBK1Q5TCY1 1321 aaPredicted RBP12.02□□□□□ -0.49
SLIT3-205ENST00000519486 FBLN2P98095 1184 aa12.01□□□□□ -0.49
SLIT3-205ENST00000519486 TRIM26Q12899 539 aaPredicted RBP11.95□□□□□ -0.5
SLIT3-205ENST00000519486 CECR2Q9BXF3 1484 aa11.94□□□□□ -0.5
SLIT3-205ENST00000519486 MYO15BQ96JP2 1530 aa11.87□□□□□ -0.51
SLIT3-205ENST00000519486 CENPBP07199 599 aaPredicted RBP11.87□□□□□ -0.51
SLIT3-205ENST00000519486 NPM1P06748 294 aaKnown RBP eCLIP11.87□□□□□ -0.51
SLIT3-205ENST00000519486 ZEB1P37275 1124 aaPredicted RBP11.87□□□□□ -0.51
SLIT3-205ENST00000519486 CCER1Q8TC90 406 aaPredicted RBP11.81□□□□□ -0.52
SLIT3-205ENST00000519486 RANGAP1P46060 587 aaPredicted RBP11.79□□□□□ -0.52
SLIT3-205ENST00000519486 UBTFP17480 764 aaKnown RBP11.78□□□□□ -0.52
SLIT3-205ENST00000519486 APLP2Q06481 763 aa11.78□□□□□ -0.52
SLIT3-205ENST00000519486 MYT1LQ9UL68 1186 aa11.78□□□□□ -0.52
SLIT3-205ENST00000519486 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.76□□□□□ -0.53
SLIT3-205ENST00000519486 HNRNPUL2Q1KMD3 747 aaKnown RBP11.76□□□□□ -0.53
SLIT3-205ENST00000519486 TRHP20396 242 aaPredicted RBP11.75□□□□□ -0.53
SLIT3-205ENST00000519486 ATP1B4Q9UN42 357 aaPredicted RBP11.75□□□□□ -0.53
SLIT3-205ENST00000519486 DCAF1Q9Y4B6 1507 aa11.74□□□□□ -0.53
SLIT3-205ENST00000519486 SCAF1Q9H7N4 1312 aaKnown RBP11.73□□□□□ -0.53
SLIT3-205ENST00000519486 BAZ1BQ9UIG0 1483 aaKnown RBP11.72□□□□□ -0.53
SLIT3-205ENST00000519486 PDS5BQ9NTI5 1447 aa11.72□□□□□ -0.53
SLIT3-205ENST00000519486 CHMP7Q8WUX9 453 aaPredicted RBP11.69□□□□□ -0.54
SLIT3-205ENST00000519486 DNAJC5BQ9UF47 199 aa11.67□□□□□ -0.54
SLIT3-205ENST00000519486 AEBP2Q6ZN18 517 aaPredicted RBP11.63□□□□□ -0.55
SLIT3-205ENST00000519486 GTF3C3Q9Y5Q9 886 aa11.6□□□□□ -0.55
SLIT3-205ENST00000519486 RSF1Q96T23 1441 aaPredicted RBP11.6□□□□□ -0.55
SLIT3-205ENST00000519486 SMARCA2P51531 1590 aa11.58□□□□□ -0.56
SLIT3-205ENST00000519486 ACIN1Q9UKV3 1341 aaKnown RBP11.58□□□□□ -0.56
SLIT3-205ENST00000519486 OSCARQ8IYS5 282 aa11.56□□□□□ -0.56
SLIT3-205ENST00000519486 BAZ1AQ9NRL2 1556 aaPredicted RBP11.53□□□□□ -0.56
SLIT3-205ENST00000519486 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
SLIT3-205ENST00000519486 YTHDC1Q96MU7 727 aaKnown RBP11.48□□□□□ -0.57
SLIT3-205ENST00000519486 EIF4G1Q04637 1599 aaKnown RBP11.46□□□□□ -0.57
SLIT3-205ENST00000519486 NEUROD1Q13562 356 aa11.42□□□□□ -0.58
SLIT3-205ENST00000519486 CADPSQ9ULU8 1353 aa11.41□□□□□ -0.58
SLIT3-205ENST00000519486 CSRNP3Q8WYN3 585 aa11.41□□□□□ -0.58
SLIT3-205ENST00000519486 CC2D2AQ9P2K1 1620 aa11.4□□□□□ -0.58
SLIT3-205ENST00000519486 DIEXFQ68CQ4 756 aaKnown RBP11.4□□□□□ -0.59
SLIT3-205ENST00000519486 ITGAEP38570 1179 aa11.37□□□□□ -0.59
SLIT3-205ENST00000519486 ERICH6Q7L0X2 663 aa11.36□□□□□ -0.59
SLIT3-205ENST00000519486 ATAD2BQ9ULI0 1458 aa11.36□□□□□ -0.59
SLIT3-205ENST00000519486 CEP164Q9UPV0 1460 aa11.36□□□□□ -0.59
SLIT3-205ENST00000519486 BCL11AQ9H165 835 aa11.35□□□□□ -0.59
SLIT3-205ENST00000519486 CDK11AQ9UQ88 783 aaPredicted RBP11.35□□□□□ -0.59
SLIT3-205ENST00000519486 CYB5RLQ6IPT4 315 aa11.35□□□□□ -0.59
SLIT3-205ENST00000519486 NCAPD3P42695 1498 aa11.33□□□□□ -0.6
SLIT3-205ENST00000519486 MROH2BQ7Z745 1585 aa11.3□□□□□ -0.6
SLIT3-205ENST00000519486 ABCC8Q09428 1581 aa11.25□□□□□ -0.61
SLIT3-205ENST00000519486 ARID4BQ4LE39 1312 aaPredicted RBP11.24□□□□□ -0.61
SLIT3-205ENST00000519486 PLPPR3Q6T4P5 718 aa11.23□□□□□ -0.61
SLIT3-205ENST00000519486 FANCD2Q9BXW9 1451 aa11.2□□□□□ -0.62
SLIT3-205ENST00000519486 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
SLIT3-205ENST00000519486 DNAJC5Q9H3Z4 198 aa11.19□□□□□ -0.62
SLIT3-205ENST00000519486 CUX2O14529 1486 aa11.19□□□□□ -0.62
SLIT3-205ENST00000519486 CEP162Q5TB80 1403 aa11.18□□□□□ -0.62
SLIT3-205ENST00000519486 ANP32EQ9BTT0 268 aa11.18□□□□□ -0.62
SLIT3-205ENST00000519486 WIZO95785 1651 aa11.18□□□□□ -0.62
SLIT3-205ENST00000519486 MRC2Q9UBG0 1479 aa11.17□□□□□ -0.62
SLIT3-205ENST00000519486 SOGA1O94964 1423 aa11.17□□□□□ -0.62
SLIT3-205ENST00000519486 WRNQ14191 1432 aaPredicted RBP eCLIP11.16□□□□□ -0.62
SLIT3-205ENST00000519486 ARID3CA6NKF2 412 aa11.14□□□□□ -0.63
SLIT3-205ENST00000519486 KCNH8Q96L42 1107 aa11.14□□□□□ -0.63
SLIT3-205ENST00000519486 BICRAQ9NZM4 1560 aa11.13□□□□□ -0.63
SLIT3-205ENST00000519486 SMARCA4P51532 1647 aa11.13□□□□□ -0.63
SLIT3-205ENST00000519486 CARMIL2Q6F5E8 1435 aa11.13□□□□□ -0.63
SLIT3-205ENST00000519486 CCDC88BA6NC98 1476 aa11.12□□□□□ -0.63
SLIT3-205ENST00000519486 TDRD9Q8NDG6 1382 aaKnown RBP11.11□□□□□ -0.63
SLIT3-205ENST00000519486 BCANQ96GW7 911 aa11.11□□□□□ -0.63
SLIT3-205ENST00000519486 FAM50AQ14320 339 aaKnown RBP11.11□□□□□ -0.63
SLIT3-205ENST00000519486 P3H3Q8IVL6 736 aa11.11□□□□□ -0.63
SLIT3-205ENST00000519486 HMGXB3Q12766 1538 aa11.1□□□□□ -0.63
SLIT3-205ENST00000519486 TNIKQ9UKE5 1360 aa11.1□□□□□ -0.63
SLIT3-205ENST00000519486 PLEKHD1A6NEE1 506 aa11.1□□□□□ -0.63
SLIT3-205ENST00000519486 CLIP1P30622 1438 aa11.09□□□□□ -0.63
SLIT3-205ENST00000519486 KIF27Q86VH2 1401 aa11.08□□□□□ -0.64
SLIT3-205ENST00000519486 NEFLP07196 543 aa11.07□□□□□ -0.64
SLIT3-205ENST00000519486 GOLGA3Q08378 1498 aa11.07□□□□□ -0.64
SLIT3-205ENST00000519486 EEA1Q15075 1411 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms