RNA–Protein interactions for RNA: ENST00000519312.5

CDKL3-203, Transcript of cyclin dependent kinase like 3, humanhuman

TSL 1 (best)

Gene CDKL3, Length 1,198 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-203ENST00000519312 AEBP2Q6ZN18 517 aaPredicted RBP27.63■■■□□ 2.01
CDKL3-203ENST00000519312 CHIC1Q5VXU3 224 aa26.49■■□□□ 1.83
CDKL3-203ENST00000519312 SENP3Q9H4L4 574 aaPredicted RBP23.48■■□□□ 1.35
CDKL3-203ENST00000519312 PHF23Q9BUL5 403 aaPredicted RBP23.27■■□□□ 1.32
CDKL3-203ENST00000519312 FOXD1Q16676 465 aa21.88■■□□□ 1.09
CDKL3-203ENST00000519312 PLPPR3Q6T4P5 718 aa21.28■■□□□ 1
CDKL3-203ENST00000519312 PPP6R1Q9UPN7 881 aa20.71■□□□□ 0.91
CDKL3-203ENST00000519312 ADRA2BP18089 450 aa20.67■□□□□ 0.9
CDKL3-203ENST00000519312 PIAS4Q8N2W9 510 aaPredicted RBP20.52■□□□□ 0.88
CDKL3-203ENST00000519312 MSH5O43196 834 aa20.31■□□□□ 0.84
CDKL3-203ENST00000519312 POTEDQ86YR6 584 aa19.65■□□□□ 0.74
CDKL3-203ENST00000519312 NISCHQ9Y2I1 1504 aa19.64■□□□□ 0.73
CDKL3-203ENST00000519312 MAPK8IP2Q13387 824 aaPredicted RBP18.89■□□□□ 0.61
CDKL3-203ENST00000519312 SCAF1Q9H7N4 1312 aaKnown RBP18.82■□□□□ 0.6
CDKL3-203ENST00000519312 PPP4R3CPQ6ZMV5 832 aa18.72■□□□□ 0.59
CDKL3-203ENST00000519312 DMRT2Q9Y5R5 561 aa18.68■□□□□ 0.58
CDKL3-203ENST00000519312 CNKSR2Q8WXI2 1034 aa18.27■□□□□ 0.52
CDKL3-203ENST00000519312 HOXD11P31277 338 aaPredicted RBP18.08■□□□□ 0.48
CDKL3-203ENST00000519312 NCBP3Q53F19 620 aaKnown RBP18.05■□□□□ 0.48
CDKL3-203ENST00000519312 RNF216Q9NWF9 866 aaPredicted RBP18.02■□□□□ 0.48
CDKL3-203ENST00000519312 DCAF8L1A6NGE4 600 aa17.93■□□□□ 0.46
CDKL3-203ENST00000519312 NPM3O75607 178 aaKnown RBP17.84■□□□□ 0.45
CDKL3-203ENST00000519312 ABCC9O60706 1549 aa17.8■□□□□ 0.44
CDKL3-203ENST00000519312 KCNA4P22459 653 aa17.79■□□□□ 0.44
CDKL3-203ENST00000519312 CCDC180Q9P1Z9 1646 aa17.77■□□□□ 0.44
CDKL3-203ENST00000519312 RNF39Q9H2S5 420 aa17.38■□□□□ 0.37
CDKL3-203ENST00000519312 DNAJC5BQ9UF47 199 aa17.34■□□□□ 0.37
CDKL3-203ENST00000519312 CACNB1Q02641 598 aaPredicted RBP17.28■□□□□ 0.36
CDKL3-203ENST00000519312 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.26■□□□□ 0.35
CDKL3-203ENST00000519312 C1QBPQ07021 282 aaKnown RBP17.12■□□□□ 0.33
CDKL3-203ENST00000519312 SLC4A2P04920 1241 aa16.96■□□□□ 0.31
CDKL3-203ENST00000519312 RB1CC1Q8TDY2 1594 aa16.95■□□□□ 0.3
CDKL3-203ENST00000519312 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
CDKL3-203ENST00000519312 NACADO15069 1562 aa16.82■□□□□ 0.28
CDKL3-203ENST00000519312 SLC4A1APQ9BWU0 796 aaKnown RBP16.82■□□□□ 0.28
CDKL3-203ENST00000519312 SPINK5Q9NQ38 1064 aaPredicted RBP16.63■□□□□ 0.25
CDKL3-203ENST00000519312 MYO15BQ96JP2 1530 aa16.62■□□□□ 0.25
CDKL3-203ENST00000519312 CAPN15O75808 1086 aa16.56■□□□□ 0.24
CDKL3-203ENST00000519312 UNC13AQ9UPW8 1703 aa16.53■□□□□ 0.24
CDKL3-203ENST00000519312 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.5■□□□□ 0.23
CDKL3-203ENST00000519312 HNRNPUL2Q1KMD3 747 aaKnown RBP16.5■□□□□ 0.23
CDKL3-203ENST00000519312 BICRAQ9NZM4 1560 aa16.47■□□□□ 0.23
CDKL3-203ENST00000519312 MYCNP04198 464 aaPredicted RBP16.47■□□□□ 0.23
CDKL3-203ENST00000519312 PABPN1Q86U42 306 aaKnown RBP eCLIP16.47■□□□□ 0.23
CDKL3-203ENST00000519312 FOXD4L1Q9NU39 408 aa16.46■□□□□ 0.23
CDKL3-203ENST00000519312 SAMD1Q6SPF0 538 aaPredicted RBP16.44■□□□□ 0.22
CDKL3-203ENST00000519312 APLP2Q06481 763 aa16.42■□□□□ 0.22
CDKL3-203ENST00000519312 DCAF8L2P0C7V8 631 aa16.39■□□□□ 0.21
CDKL3-203ENST00000519312 TRHP20396 242 aaPredicted RBP16.39■□□□□ 0.21
CDKL3-203ENST00000519312 DSG3P32926 999 aa16.39■□□□□ 0.21
CDKL3-203ENST00000519312 SHROOM4Q9ULL8 1493 aa16.36■□□□□ 0.21
CDKL3-203ENST00000519312 ZBTB22O15209 634 aa16.36■□□□□ 0.21
CDKL3-203ENST00000519312 DCAF1Q9Y4B6 1507 aa16.31■□□□□ 0.2
CDKL3-203ENST00000519312 ZNF219Q9P2Y4 722 aaPredicted RBP16.31■□□□□ 0.2
CDKL3-203ENST00000519312 ZCCHC6Q5VYS8 1495 aaKnown RBP16.27■□□□□ 0.19
CDKL3-203ENST00000519312 ABCB7O75027 752 aa16.24■□□□□ 0.19
CDKL3-203ENST00000519312 CC2D2AQ9P2K1 1620 aa16.12■□□□□ 0.17
CDKL3-203ENST00000519312 ATF5Q9Y2D1 282 aaPredicted RBP16.12■□□□□ 0.17
CDKL3-203ENST00000519312 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
CDKL3-203ENST00000519312 EIF4G1Q04637 1599 aaKnown RBP16.08■□□□□ 0.16
CDKL3-203ENST00000519312 SCRIBQ14160 1630 aa16.05■□□□□ 0.16
CDKL3-203ENST00000519312 POLA2Q14181 598 aa16■□□□□ 0.15
CDKL3-203ENST00000519312 ATXN8OSP0DMR3 200 aa15.89■□□□□ 0.13
CDKL3-203ENST00000519312 CSRNP3Q8WYN3 585 aa15.86■□□□□ 0.13
CDKL3-203ENST00000519312 EHMT2Q96KQ7 1210 aa15.85■□□□□ 0.13
CDKL3-203ENST00000519312 DNAJC5Q9H3Z4 198 aa15.67■□□□□ 0.1
CDKL3-203ENST00000519312 ZBTB12Q9Y330 459 aaPredicted RBP15.65■□□□□ 0.1
CDKL3-203ENST00000519312 RBM42Q9BTD8 480 aaKnown RBP15.59■□□□□ 0.09
CDKL3-203ENST00000519312 CUX2O14529 1486 aa15.55■□□□□ 0.08
CDKL3-203ENST00000519312 NCAPD3P42695 1498 aa15.53■□□□□ 0.08
CDKL3-203ENST00000519312 OSCARQ8IYS5 282 aa15.5■□□□□ 0.07
CDKL3-203ENST00000519312 HMGXB3Q12766 1538 aa15.43■□□□□ 0.06
CDKL3-203ENST00000519312 ATAD2BQ9ULI0 1458 aa15.42■□□□□ 0.06
CDKL3-203ENST00000519312 FBLN2P98095 1184 aa15.42■□□□□ 0.06
CDKL3-203ENST00000519312 ERCC6Q03468 1493 aa15.4■□□□□ 0.06
CDKL3-203ENST00000519312 SMARCA2P51531 1590 aa15.39■□□□□ 0.05
CDKL3-203ENST00000519312 MKRN4PQ13434 485 aaPredicted RBP15.38■□□□□ 0.05
CDKL3-203ENST00000519312 POTEHQ6S545 545 aa15.36■□□□□ 0.05
CDKL3-203ENST00000519312 SMARCA4P51532 1647 aa15.35■□□□□ 0.05
CDKL3-203ENST00000519312 AKT1S1Q96B36 256 aa15.31■□□□□ 0.04
CDKL3-203ENST00000519312 PEG3Q9GZU2 1588 aa15.29■□□□□ 0.04
CDKL3-203ENST00000519312 BAZ1AQ9NRL2 1556 aaPredicted RBP15.27■□□□□ 0.03
CDKL3-203ENST00000519312 NESP48681 1621 aa15.24■□□□□ 0.03
CDKL3-203ENST00000519312 BAZ1BQ9UIG0 1483 aaKnown RBP15.23■□□□□ 0.03
CDKL3-203ENST00000519312 THOC2Q8NI27 1593 aaKnown RBP15.22■□□□□ 0.03
CDKL3-203ENST00000519312 LAMC3Q9Y6N6 1575 aa15.21■□□□□ 0.03
CDKL3-203ENST00000519312 SPDYE2BA6NHP3 402 aa15.2■□□□□ 0.02
CDKL3-203ENST00000519312 SPDYE6P0CI01 402 aa15.2■□□□□ 0.02
CDKL3-203ENST00000519312 SPDYE2Q495Y8 402 aa15.2■□□□□ 0.02
CDKL3-203ENST00000519312 REM2Q8IYK8 340 aaPredicted RBP15.2■□□□□ 0.02
CDKL3-203ENST00000519312 CHRDL2Q6WN34 429 aa15.17■□□□□ 0.02
CDKL3-203ENST00000519312 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
CDKL3-203ENST00000519312 ZNF692Q9BU19 519 aaPredicted RBP15.09■□□□□ 0.01
CDKL3-203ENST00000519312 MROH2BQ7Z745 1585 aa15.09■□□□□ 0.01
CDKL3-203ENST00000519312 KIF21AQ7Z4S6 1674 aa15.06■□□□□ 0
CDKL3-203ENST00000519312 SSUH2Q9Y2M2 353 aa15.05■□□□□ -0
CDKL3-203ENST00000519312 PITPNM1O00562 1244 aa15.04■□□□□ -0
CDKL3-203ENST00000519312 CADPSQ9ULU8 1353 aa15□□□□□ -0.01
CDKL3-203ENST00000519312 WDR62O43379 1518 aa14.98□□□□□ -0.01
CDKL3-203ENST00000519312 MRC2Q9UBG0 1479 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms