RNA–Protein interactions for RNA: ENST00000519109.5

RBM12B-204, Transcript of RNA binding motif protein 12B, humanhuman

TSL 2

Gene RBM12B, Length 615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM12B-204ENST00000519109 CHIC1Q5VXU3 224 aa22.67■■□□□ 1.22
RBM12B-204ENST00000519109 AEBP2Q6ZN18 517 aaPredicted RBP22.64■■□□□ 1.21
RBM12B-204ENST00000519109 PHF23Q9BUL5 403 aaPredicted RBP20.15■□□□□ 0.82
RBM12B-204ENST00000519109 SENP3Q9H4L4 574 aaPredicted RBP18.86■□□□□ 0.61
RBM12B-204ENST00000519109 PLPPR3Q6T4P5 718 aa18.64■□□□□ 0.57
RBM12B-204ENST00000519109 ADRA2BP18089 450 aa17.67■□□□□ 0.42
RBM12B-204ENST00000519109 NISCHQ9Y2I1 1504 aa17.6■□□□□ 0.41
RBM12B-204ENST00000519109 FOXD1Q16676 465 aa17.57■□□□□ 0.4
RBM12B-204ENST00000519109 PPP6R1Q9UPN7 881 aa17.57■□□□□ 0.4
RBM12B-204ENST00000519109 KCNA4P22459 653 aa17.11■□□□□ 0.33
RBM12B-204ENST00000519109 EHMT2Q96KQ7 1210 aa16.76■□□□□ 0.27
RBM12B-204ENST00000519109 ABCC9O60706 1549 aa16.66■□□□□ 0.26
RBM12B-204ENST00000519109 PIAS4Q8N2W9 510 aaPredicted RBP16.66■□□□□ 0.26
RBM12B-204ENST00000519109 PPP4R3CPQ6ZMV5 832 aa16.59■□□□□ 0.25
RBM12B-204ENST00000519109 SLC4A1APQ9BWU0 796 aaKnown RBP16.32■□□□□ 0.2
RBM12B-204ENST00000519109 CSRNP3Q8WYN3 585 aa16.28■□□□□ 0.2
RBM12B-204ENST00000519109 NCBP3Q53F19 620 aaKnown RBP16.21■□□□□ 0.19
RBM12B-204ENST00000519109 NPM3O75607 178 aaKnown RBP16.17■□□□□ 0.18
RBM12B-204ENST00000519109 CCDC180Q9P1Z9 1646 aa16.16■□□□□ 0.18
RBM12B-204ENST00000519109 DNAJC5BQ9UF47 199 aa16.05■□□□□ 0.16
RBM12B-204ENST00000519109 CNKSR2Q8WXI2 1034 aa15.9■□□□□ 0.14
RBM12B-204ENST00000519109 ZBTB22O15209 634 aa15.84■□□□□ 0.13
RBM12B-204ENST00000519109 SCAF1Q9H7N4 1312 aaKnown RBP15.78■□□□□ 0.12
RBM12B-204ENST00000519109 MAPK8IP2Q13387 824 aaPredicted RBP15.74■□□□□ 0.11
RBM12B-204ENST00000519109 MSH5O43196 834 aa15.73■□□□□ 0.11
RBM12B-204ENST00000519109 RB1CC1Q8TDY2 1594 aa15.63■□□□□ 0.09
RBM12B-204ENST00000519109 FOXD4L1Q9NU39 408 aa15.42■□□□□ 0.06
RBM12B-204ENST00000519109 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
RBM12B-204ENST00000519109 UNC13AQ9UPW8 1703 aa15.41■□□□□ 0.06
RBM12B-204ENST00000519109 PABPN1Q86U42 306 aaKnown RBP eCLIP15.36■□□□□ 0.05
RBM12B-204ENST00000519109 NACADO15069 1562 aa15.35■□□□□ 0.05
RBM12B-204ENST00000519109 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
RBM12B-204ENST00000519109 HOXD11P31277 338 aaPredicted RBP15.21■□□□□ 0.03
RBM12B-204ENST00000519109 DNAJC5Q9H3Z4 198 aa15.19■□□□□ 0.02
RBM12B-204ENST00000519109 BICRAQ9NZM4 1560 aa15.17■□□□□ 0.02
RBM12B-204ENST00000519109 SLC4A2P04920 1241 aa15.15■□□□□ 0.02
RBM12B-204ENST00000519109 DCAF8L2P0C7V8 631 aa15.09■□□□□ 0.01
RBM12B-204ENST00000519109 CECR2Q9BXF3 1484 aa15.07■□□□□ 0
RBM12B-204ENST00000519109 CC2D2AQ9P2K1 1620 aa15.06■□□□□ 0
RBM12B-204ENST00000519109 SHROOM4Q9ULL8 1493 aa14.89□□□□□ -0.03
RBM12B-204ENST00000519109 MYO15BQ96JP2 1530 aa14.88□□□□□ -0.03
RBM12B-204ENST00000519109 EIF4G1Q04637 1599 aaKnown RBP14.87□□□□□ -0.03
RBM12B-204ENST00000519109 MYCNP04198 464 aaPredicted RBP14.81□□□□□ -0.04
RBM12B-204ENST00000519109 ATXN8OSP0DMR3 200 aa14.76□□□□□ -0.05
RBM12B-204ENST00000519109 SCRIBQ14160 1630 aa14.69□□□□□ -0.06
RBM12B-204ENST00000519109 RTN4Q9NQC3 1192 aaKnown RBP14.65□□□□□ -0.06
RBM12B-204ENST00000519109 CUX2O14529 1486 aa14.6□□□□□ -0.07
RBM12B-204ENST00000519109 FKBP8Q14318 412 aa14.59□□□□□ -0.07
RBM12B-204ENST00000519109 ATF5Q9Y2D1 282 aaPredicted RBP14.58□□□□□ -0.08
RBM12B-204ENST00000519109 DCAF8L1A6NGE4 600 aa14.5□□□□□ -0.09
RBM12B-204ENST00000519109 DCAF1Q9Y4B6 1507 aa14.49□□□□□ -0.09
RBM12B-204ENST00000519109 ZCCHC6Q5VYS8 1495 aaKnown RBP14.47□□□□□ -0.09
RBM12B-204ENST00000519109 ERCC6Q03468 1493 aa14.46□□□□□ -0.09
RBM12B-204ENST00000519109 AMER1Q5JTC6 1135 aaPredicted RBP14.46□□□□□ -0.09
RBM12B-204ENST00000519109 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.43□□□□□ -0.1
RBM12B-204ENST00000519109 U3KPZ7 1027 aaPredicted RBP14.4□□□□□ -0.1
RBM12B-204ENST00000519109 TRIM41Q8WV44 630 aa14.35□□□□□ -0.11
RBM12B-204ENST00000519109 SLC24A1O60721 1099 aa14.3□□□□□ -0.12
RBM12B-204ENST00000519109 SAMD1Q6SPF0 538 aaPredicted RBP14.27□□□□□ -0.13
RBM12B-204ENST00000519109 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP14.23□□□□□ -0.13
RBM12B-204ENST00000519109 HNRNPUL2Q1KMD3 747 aaKnown RBP14.23□□□□□ -0.13
RBM12B-204ENST00000519109 THOC2Q8NI27 1593 aaKnown RBP14.18□□□□□ -0.14
RBM12B-204ENST00000519109 NESP48681 1621 aa14.15□□□□□ -0.14
RBM12B-204ENST00000519109 ZNF219Q9P2Y4 722 aaPredicted RBP14.11□□□□□ -0.15
RBM12B-204ENST00000519109 NCAPD3P42695 1498 aa14.11□□□□□ -0.15
RBM12B-204ENST00000519109 SMARCA2P51531 1590 aa14.07□□□□□ -0.16
RBM12B-204ENST00000519109 KIF21AQ7Z4S6 1674 aa14.07□□□□□ -0.16
RBM12B-204ENST00000519109 HMGXB3Q12766 1538 aa14.03□□□□□ -0.16
RBM12B-204ENST00000519109 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
RBM12B-204ENST00000519109 LAMC3Q9Y6N6 1575 aa13.97□□□□□ -0.17
RBM12B-204ENST00000519109 BAZ1AQ9NRL2 1556 aaPredicted RBP13.96□□□□□ -0.18
RBM12B-204ENST00000519109 MKRN4PQ13434 485 aaPredicted RBP13.95□□□□□ -0.18
RBM12B-204ENST00000519109 SMARCA4P51532 1647 aa13.93□□□□□ -0.18
RBM12B-204ENST00000519109 BAZ1BQ9UIG0 1483 aaKnown RBP13.88□□□□□ -0.19
RBM12B-204ENST00000519109 PDS5BQ9NTI5 1447 aa13.86□□□□□ -0.19
RBM12B-204ENST00000519109 SPDYE4A6NLX3 237 aa13.85□□□□□ -0.19
RBM12B-204ENST00000519109 APLP2Q06481 763 aa13.84□□□□□ -0.19
RBM12B-204ENST00000519109 SPINK5Q9NQ38 1064 aaPredicted RBP13.82□□□□□ -0.2
RBM12B-204ENST00000519109 MRC2Q9UBG0 1479 aa13.81□□□□□ -0.2
RBM12B-204ENST00000519109 WDR62O43379 1518 aa13.81□□□□□ -0.2
RBM12B-204ENST00000519109 RIMBP3CA6NJZ7 1639 aa13.79□□□□□ -0.2
RBM12B-204ENST00000519109 RIMBP3BA6NNM3 1639 aa13.79□□□□□ -0.2
RBM12B-204ENST00000519109 RIMBP3Q9UFD9 1639 aa13.79□□□□□ -0.2
RBM12B-204ENST00000519109 PROM2Q8N271 834 aa13.79□□□□□ -0.2
RBM12B-204ENST00000519109 OSCARQ8IYS5 282 aa13.77□□□□□ -0.21
RBM12B-204ENST00000519109 PEG3Q9GZU2 1588 aa13.75□□□□□ -0.21
RBM12B-204ENST00000519109 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
RBM12B-204ENST00000519109 FBXO3Q9UK99 471 aa13.71□□□□□ -0.21
RBM12B-204ENST00000519109 POLA2Q14181 598 aa13.7□□□□□ -0.22
RBM12B-204ENST00000519109 RNF39Q9H2S5 420 aa13.67□□□□□ -0.22
RBM12B-204ENST00000519109 CADPSQ9ULU8 1353 aa13.65□□□□□ -0.22
RBM12B-204ENST00000519109 CEP164Q9UPV0 1460 aa13.64□□□□□ -0.23
RBM12B-204ENST00000519109 VASPP50552 380 aaPredicted RBP13.64□□□□□ -0.23
RBM12B-204ENST00000519109 FBLN2P98095 1184 aa13.64□□□□□ -0.23
RBM12B-204ENST00000519109 ARHGEF11O15085 1522 aa13.64□□□□□ -0.23
RBM12B-204ENST00000519109 CAPN15O75808 1086 aa13.6□□□□□ -0.23
RBM12B-204ENST00000519109 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
RBM12B-204ENST00000519109 MROH2BQ7Z745 1585 aa13.56□□□□□ -0.24
RBM12B-204ENST00000519109 FANCD2Q9BXW9 1451 aa13.55□□□□□ -0.24
RBM12B-204ENST00000519109 CYB5RLQ6IPT4 315 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms