RNA–Protein interactions for RNA: ENST00000518390.5

RMDN1-206, Transcript of regulator of microtubule dynamics 1, humanhuman

TSL 5

Gene RMDN1, Length 565 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RMDN1-206ENST00000518390 AEBP2Q6ZN18 517 aaPredicted RBP19.72■□□□□ 0.75
RMDN1-206ENST00000518390 CHIC1Q5VXU3 224 aa18.53■□□□□ 0.56
RMDN1-206ENST00000518390 SENP3Q9H4L4 574 aaPredicted RBP16.77■□□□□ 0.28
RMDN1-206ENST00000518390 PHF23Q9BUL5 403 aaPredicted RBP16.59■□□□□ 0.25
RMDN1-206ENST00000518390 FOXD1Q16676 465 aa15.72■□□□□ 0.11
RMDN1-206ENST00000518390 POTEDQ86YR6 584 aa15.49■□□□□ 0.07
RMDN1-206ENST00000518390 MSH5O43196 834 aa14.89□□□□□ -0.03
RMDN1-206ENST00000518390 PLPPR3Q6T4P5 718 aa14.73□□□□□ -0.05
RMDN1-206ENST00000518390 PIAS4Q8N2W9 510 aaPredicted RBP14.66□□□□□ -0.06
RMDN1-206ENST00000518390 PPP6R1Q9UPN7 881 aa14.62□□□□□ -0.07
RMDN1-206ENST00000518390 ADRA2BP18089 450 aa14.59□□□□□ -0.07
RMDN1-206ENST00000518390 MAPK8IP2Q13387 824 aaPredicted RBP13.45□□□□□ -0.26
RMDN1-206ENST00000518390 DMRT2Q9Y5R5 561 aa13.28□□□□□ -0.28
RMDN1-206ENST00000518390 SCAF1Q9H7N4 1312 aaKnown RBP13.23□□□□□ -0.29
RMDN1-206ENST00000518390 CACNB1Q02641 598 aaPredicted RBP13.11□□□□□ -0.31
RMDN1-206ENST00000518390 PPP4R3CPQ6ZMV5 832 aa12.94□□□□□ -0.34
RMDN1-206ENST00000518390 DCAF8L1A6NGE4 600 aa12.88□□□□□ -0.35
RMDN1-206ENST00000518390 HOXD11P31277 338 aaPredicted RBP12.71□□□□□ -0.37
RMDN1-206ENST00000518390 CNKSR2Q8WXI2 1034 aa12.69□□□□□ -0.38
RMDN1-206ENST00000518390 RNF39Q9H2S5 420 aa12.68□□□□□ -0.38
RMDN1-206ENST00000518390 RNF216Q9NWF9 866 aaPredicted RBP12.59□□□□□ -0.39
RMDN1-206ENST00000518390 C1QBPQ07021 282 aaKnown RBP12.46□□□□□ -0.41
RMDN1-206ENST00000518390 NCBP3Q53F19 620 aaKnown RBP12.36□□□□□ -0.43
RMDN1-206ENST00000518390 DNAJC5BQ9UF47 199 aa12.23□□□□□ -0.45
RMDN1-206ENST00000518390 NPM3O75607 178 aaKnown RBP12.22□□□□□ -0.45
RMDN1-206ENST00000518390 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.46
RMDN1-206ENST00000518390 POTEHQ6S545 545 aa12.03□□□□□ -0.48
RMDN1-206ENST00000518390 KCNA4P22459 653 aa11.91□□□□□ -0.5
RMDN1-206ENST00000518390 U3KPZ7 1027 aaPredicted RBP11.91□□□□□ -0.5
RMDN1-206ENST00000518390 DNAJC5Q9H3Z4 198 aa11.85□□□□□ -0.51
RMDN1-206ENST00000518390 ABCC9O60706 1549 aa11.84□□□□□ -0.51
RMDN1-206ENST00000518390 SPINK5Q9NQ38 1064 aaPredicted RBP11.82□□□□□ -0.52
RMDN1-206ENST00000518390 CAPN15O75808 1086 aa11.81□□□□□ -0.52
RMDN1-206ENST00000518390 DSG3P32926 999 aa11.72□□□□□ -0.53
RMDN1-206ENST00000518390 SLC4A2P04920 1241 aa11.71□□□□□ -0.53
RMDN1-206ENST00000518390 TRHP20396 242 aaPredicted RBP11.61□□□□□ -0.55
RMDN1-206ENST00000518390 ABCB7O75027 752 aa11.56□□□□□ -0.56
RMDN1-206ENST00000518390 APLP2Q06481 763 aa11.47□□□□□ -0.57
RMDN1-206ENST00000518390 ZNF219Q9P2Y4 722 aaPredicted RBP11.46□□□□□ -0.57
RMDN1-206ENST00000518390 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.43□□□□□ -0.58
RMDN1-206ENST00000518390 HNRNPUL2Q1KMD3 747 aaKnown RBP11.43□□□□□ -0.58
RMDN1-206ENST00000518390 SAMD1Q6SPF0 538 aaPredicted RBP11.39□□□□□ -0.59
RMDN1-206ENST00000518390 EHMT2Q96KQ7 1210 aa11.37□□□□□ -0.59
RMDN1-206ENST00000518390 NISCHQ9Y2I1 1504 aa11.34□□□□□ -0.59
RMDN1-206ENST00000518390 SLC4A1APQ9BWU0 796 aaKnown RBP11.33□□□□□ -0.6
RMDN1-206ENST00000518390 MYCNP04198 464 aaPredicted RBP11.27□□□□□ -0.61
RMDN1-206ENST00000518390 POLA2Q14181 598 aa11.23□□□□□ -0.61
RMDN1-206ENST00000518390 RBM42Q9BTD8 480 aaKnown RBP11.13□□□□□ -0.63
RMDN1-206ENST00000518390 CHRDL2Q6WN34 429 aa11.12□□□□□ -0.63
RMDN1-206ENST00000518390 ATF5Q9Y2D1 282 aaPredicted RBP11.11□□□□□ -0.63
RMDN1-206ENST00000518390 FOXD4L1Q9NU39 408 aa11.09□□□□□ -0.63
RMDN1-206ENST00000518390 CSRNP3Q8WYN3 585 aa11.08□□□□□ -0.64
RMDN1-206ENST00000518390 SP7Q8TDD2 431 aaPredicted RBP11□□□□□ -0.65
RMDN1-206ENST00000518390 ZBTB22O15209 634 aa10.94□□□□□ -0.66
RMDN1-206ENST00000518390 TRIM41Q8WV44 630 aa10.94□□□□□ -0.66
RMDN1-206ENST00000518390 OSCARQ8IYS5 282 aa10.88□□□□□ -0.67
RMDN1-206ENST00000518390 ZBTB12Q9Y330 459 aaPredicted RBP10.88□□□□□ -0.67
RMDN1-206ENST00000518390 AKT1S1Q96B36 256 aa10.86□□□□□ -0.67
RMDN1-206ENST00000518390 PABPN1Q86U42 306 aaKnown RBP eCLIP10.82□□□□□ -0.68
RMDN1-206ENST00000518390 REM2Q8IYK8 340 aaPredicted RBP10.81□□□□□ -0.68
RMDN1-206ENST00000518390 PIP4P2Q8N4L2 257 aa10.74□□□□□ -0.69
RMDN1-206ENST00000518390 CECR2Q9BXF3 1484 aa10.74□□□□□ -0.69
RMDN1-206ENST00000518390 PITPNM1O00562 1244 aa10.71□□□□□ -0.69
RMDN1-206ENST00000518390 CCDC180Q9P1Z9 1646 aa10.7□□□□□ -0.7
RMDN1-206ENST00000518390 HAX1O00165 279 aa10.7□□□□□ -0.7
RMDN1-206ENST00000518390 RB1CC1Q8TDY2 1594 aa10.69□□□□□ -0.7
RMDN1-206ENST00000518390 ATXN8OSP0DMR3 200 aa10.69□□□□□ -0.7
RMDN1-206ENST00000518390 UNC13AQ9UPW8 1703 aa10.66□□□□□ -0.7
RMDN1-206ENST00000518390 CC2D2AQ9P2K1 1620 aa10.65□□□□□ -0.7
RMDN1-206ENST00000518390 FXR2P51116 673 aaKnown RBP eCLIP10.62□□□□□ -0.71
RMDN1-206ENST00000518390 FBLN2P98095 1184 aa10.62□□□□□ -0.71
RMDN1-206ENST00000518390 CUX2O14529 1486 aa10.57□□□□□ -0.72
RMDN1-206ENST00000518390 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
RMDN1-206ENST00000518390 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
RMDN1-206ENST00000518390 EVX2Q03828 476 aa10.57□□□□□ -0.72
RMDN1-206ENST00000518390 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
RMDN1-206ENST00000518390 MKRN4PQ13434 485 aaPredicted RBP10.56□□□□□ -0.72
RMDN1-206ENST00000518390 CLEC11AQ9Y240 323 aa10.53□□□□□ -0.72
RMDN1-206ENST00000518390 BICRAQ9NZM4 1560 aa10.52□□□□□ -0.72
RMDN1-206ENST00000518390 ZNF692Q9BU19 519 aaPredicted RBP10.48□□□□□ -0.73
RMDN1-206ENST00000518390 PRKAR2AP13861 404 aaKnown RBP10.44□□□□□ -0.74
RMDN1-206ENST00000518390 ILDR1Q86SU0 546 aaPredicted RBP10.43□□□□□ -0.74
RMDN1-206ENST00000518390 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
RMDN1-206ENST00000518390 SSUH2Q9Y2M2 353 aa10.4□□□□□ -0.74
RMDN1-206ENST00000518390 CHADLQ6NUI6 762 aa10.34□□□□□ -0.75
RMDN1-206ENST00000518390 LHX8Q68G74 356 aa10.33□□□□□ -0.76
RMDN1-206ENST00000518390 NACADO15069 1562 aa10.31□□□□□ -0.76
RMDN1-206ENST00000518390 EIF4G1Q04637 1599 aaKnown RBP10.31□□□□□ -0.76
RMDN1-206ENST00000518390 C19orf67A6NJJ6 358 aa10.29□□□□□ -0.76
RMDN1-206ENST00000518390 PRR29P0C7W0 189 aa10.28□□□□□ -0.76
RMDN1-206ENST00000518390 GABBR2O75899 941 aa10.27□□□□□ -0.77
RMDN1-206ENST00000518390 ERCC6Q03468 1493 aa10.24□□□□□ -0.77
RMDN1-206ENST00000518390 FARP1Q9Y4F1 1045 aaPredicted RBP10.1□□□□□ -0.79
RMDN1-206ENST00000518390 CD44P16070 742 aaKnown RBP10.09□□□□□ -0.79
RMDN1-206ENST00000518390 PLSCR2Q9NRY7 297 aa10.08□□□□□ -0.8
RMDN1-206ENST00000518390 SHROOM4Q9ULL8 1493 aa10.07□□□□□ -0.8
RMDN1-206ENST00000518390 POTEIP0CG38 1075 aa10.07□□□□□ -0.8
RMDN1-206ENST00000518390 DCAF8L2P0C7V8 631 aa10.05□□□□□ -0.8
RMDN1-206ENST00000518390 RIMBP3CA6NJZ7 1639 aa10.03□□□□□ -0.8
RMDN1-206ENST00000518390 RIMBP3BA6NNM3 1639 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms