RNA–Protein interactions for RNA: ENST00000517675.1

LINC00599-201, long intergenic non-protein coding RNA 599, humanhuman

Gene LINC00599, Length 3,334 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00599-201ENST00000517675 NISCHQ9Y2I1 1504 aa31.1■■■□□ 2.57
LINC00599-201ENST00000517675 SHROOM4Q9ULL8 1493 aa28.07■■■□□ 2.08
LINC00599-201ENST00000517675 SUPT5HO00267 1087 aaKnown RBP27.67■■■□□ 2.02
LINC00599-201ENST00000517675 DCAF8L2P0C7V8 631 aa27.45■■□□□ 1.99
LINC00599-201ENST00000517675 CHIC1Q5VXU3 224 aa26.39■■□□□ 1.81
LINC00599-201ENST00000517675 PCGF6Q9BYE7 350 aa26.31■■□□□ 1.8
LINC00599-201ENST00000517675 MYO15BQ96JP2 1530 aa26.25■■□□□ 1.79
LINC00599-201ENST00000517675 ZCCHC6Q5VYS8 1495 aaKnown RBP26.2■■□□□ 1.79
LINC00599-201ENST00000517675 LOC105371045A0A1W2PR82 267 aa26.16■■□□□ 1.78
LINC00599-201ENST00000517675 EHMT2Q96KQ7 1210 aa26.08■■□□□ 1.77
LINC00599-201ENST00000517675 PPARGC1BQ86YN6 1023 aaKnown RBP26.04■■□□□ 1.76
LINC00599-201ENST00000517675 HRCP23327 699 aa25.9■■□□□ 1.74
LINC00599-201ENST00000517675 FAM9AQ8IZU1 332 aaPredicted RBP25.79■■□□□ 1.72
LINC00599-201ENST00000517675 CCDC180Q9P1Z9 1646 aa25.68■■□□□ 1.7
LINC00599-201ENST00000517675 TRIM41Q8WV44 630 aa25.36■■□□□ 1.65
LINC00599-201ENST00000517675 TRIM26Q12899 539 aaPredicted RBP25.17■■□□□ 1.62
LINC00599-201ENST00000517675 TTBK1Q5TCY1 1321 aaPredicted RBP25.17■■□□□ 1.62
LINC00599-201ENST00000517675 SCRIBQ14160 1630 aa25.13■■□□□ 1.61
LINC00599-201ENST00000517675 ABCC9O60706 1549 aa24.98■■□□□ 1.59
LINC00599-201ENST00000517675 DCAF1Q9Y4B6 1507 aa24.97■■□□□ 1.59
LINC00599-201ENST00000517675 RSF1Q96T23 1441 aaPredicted RBP24.97■■□□□ 1.59
LINC00599-201ENST00000517675 RB1CC1Q8TDY2 1594 aa24.75■■□□□ 1.55
LINC00599-201ENST00000517675 CECR2Q9BXF3 1484 aa24.74■■□□□ 1.55
LINC00599-201ENST00000517675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.71■■□□□ 1.55
LINC00599-201ENST00000517675 CCER1Q8TC90 406 aaPredicted RBP24.52■■□□□ 1.52
LINC00599-201ENST00000517675 RANGAP1P46060 587 aaPredicted RBP24.47■■□□□ 1.51
LINC00599-201ENST00000517675 MROH2BQ7Z745 1585 aa24.47■■□□□ 1.51
LINC00599-201ENST00000517675 ZEB1P37275 1124 aaPredicted RBP24.45■■□□□ 1.5
LINC00599-201ENST00000517675 PABPN1Q86U42 306 aaKnown RBP eCLIP24.4■■□□□ 1.5
LINC00599-201ENST00000517675 UBTFP17480 764 aaKnown RBP24.33■■□□□ 1.48
LINC00599-201ENST00000517675 WIZO95785 1651 aa24.32■■□□□ 1.48
LINC00599-201ENST00000517675 SCAF1Q9H7N4 1312 aaKnown RBP24.26■■□□□ 1.47
LINC00599-201ENST00000517675 ABCC8Q09428 1581 aa24.14■■□□□ 1.45
LINC00599-201ENST00000517675 HNRNPUL2Q1KMD3 747 aaKnown RBP24.09■■□□□ 1.45
LINC00599-201ENST00000517675 CCDC88BA6NC98 1476 aa24.05■■□□□ 1.44
LINC00599-201ENST00000517675 YTHDC1Q96MU7 727 aaKnown RBP24.05■■□□□ 1.44
LINC00599-201ENST00000517675 SOGA1O94964 1423 aa24.04■■□□□ 1.44
LINC00599-201ENST00000517675 NACADO15069 1562 aa24■■□□□ 1.43
LINC00599-201ENST00000517675 DIEXFQ68CQ4 756 aaKnown RBP23.99■■□□□ 1.43
LINC00599-201ENST00000517675 NEUROD1Q13562 356 aa23.98■■□□□ 1.43
LINC00599-201ENST00000517675 RUSC2Q8N2Y8 1516 aa23.95■■□□□ 1.42
LINC00599-201ENST00000517675 CSRNP3Q8WYN3 585 aa23.93■■□□□ 1.42
LINC00599-201ENST00000517675 CEP162Q5TB80 1403 aa23.86■■□□□ 1.41
LINC00599-201ENST00000517675 GTF3C3Q9Y5Q9 886 aa23.82■■□□□ 1.4
LINC00599-201ENST00000517675 ACIN1Q9UKV3 1341 aaKnown RBP23.78■■□□□ 1.4
LINC00599-201ENST00000517675 BAZ1AQ9NRL2 1556 aaPredicted RBP23.78■■□□□ 1.4
LINC00599-201ENST00000517675 APLP2Q06481 763 aa23.69■■□□□ 1.38
LINC00599-201ENST00000517675 CENPBP07199 599 aaPredicted RBP23.61■■□□□ 1.37
LINC00599-201ENST00000517675 ITGAEP38570 1179 aa23.6■■□□□ 1.37
LINC00599-201ENST00000517675 TOP2AP11388 1531 aaKnown RBP23.58■■□□□ 1.37
LINC00599-201ENST00000517675 SMARCA2P51531 1590 aa23.58■■□□□ 1.37
LINC00599-201ENST00000517675 TNIKQ9UKE5 1360 aa23.57■■□□□ 1.36
LINC00599-201ENST00000517675 ZNF316A6NFI3 1004 aaPredicted RBP23.57■■□□□ 1.36
LINC00599-201ENST00000517675 SMARCA4P51532 1647 aa23.57■■□□□ 1.36
LINC00599-201ENST00000517675 MIER1Q8N108 512 aa23.54■■□□□ 1.36
LINC00599-201ENST00000517675 WRNQ14191 1432 aaPredicted RBP eCLIP23.51■■□□□ 1.35
LINC00599-201ENST00000517675 EIF4G1Q04637 1599 aaKnown RBP23.49■■□□□ 1.35
LINC00599-201ENST00000517675 CLIP1P30622 1438 aa23.41■■□□□ 1.34
LINC00599-201ENST00000517675 GOLGA3Q08378 1498 aa23.4■■□□□ 1.34
LINC00599-201ENST00000517675 PELP1Q8IZL8 1130 aaKnown RBP23.33■■□□□ 1.33
LINC00599-201ENST00000517675 ATP1B4Q9UN42 357 aaPredicted RBP23.33■■□□□ 1.32
LINC00599-201ENST00000517675 RAPGEF2Q9Y4G8 1499 aa23.3■■□□□ 1.32
LINC00599-201ENST00000517675 KANK4Q5T7N3 995 aaPredicted RBP23.29■■□□□ 1.32
LINC00599-201ENST00000517675 UNC13AQ9UPW8 1703 aa23.27■■□□□ 1.32
LINC00599-201ENST00000517675 SYNJ1O43426 1573 aa23.25■■□□□ 1.31
LINC00599-201ENST00000517675 EEA1Q15075 1411 aa23.21■■□□□ 1.31
LINC00599-201ENST00000517675 P3H3Q8IVL6 736 aa23.2■■□□□ 1.3
LINC00599-201ENST00000517675 CEP164Q9UPV0 1460 aa23.19■■□□□ 1.3
LINC00599-201ENST00000517675 BAZ1BQ9UIG0 1483 aaKnown RBP23.18■■□□□ 1.3
LINC00599-201ENST00000517675 BICRAQ9NZM4 1560 aa23.14■■□□□ 1.29
LINC00599-201ENST00000517675 ATAD2BQ9ULI0 1458 aa23.12■■□□□ 1.29
LINC00599-201ENST00000517675 VPS8Q8N3P4 1428 aa23.1■■□□□ 1.29
LINC00599-201ENST00000517675 HIRIP3Q9BW71 556 aaPredicted RBP23.05■■□□□ 1.28
LINC00599-201ENST00000517675 FAM50AQ14320 339 aaKnown RBP22.99■■□□□ 1.27
LINC00599-201ENST00000517675 KCNH8Q96L42 1107 aa22.98■■□□□ 1.27
LINC00599-201ENST00000517675 KIF21BO75037 1637 aa22.96■■□□□ 1.27
LINC00599-201ENST00000517675 BCANQ96GW7 911 aa22.91■■□□□ 1.26
LINC00599-201ENST00000517675 SIN3AQ96ST3 1273 aa22.88■■□□□ 1.25
LINC00599-201ENST00000517675 DHX57Q6P158 1386 aaKnown RBP22.88■■□□□ 1.25
LINC00599-201ENST00000517675 ARAP1Q96P48 1450 aa22.83■■□□□ 1.24
LINC00599-201ENST00000517675 DDX10Q13206 875 aaKnown RBP22.8■■□□□ 1.24
LINC00599-201ENST00000517675 KIF27Q86VH2 1401 aa22.72■■□□□ 1.23
LINC00599-201ENST00000517675 ARID3CA6NKF2 412 aa22.7■■□□□ 1.23
LINC00599-201ENST00000517675 CCNB3Q8WWL7 1395 aa22.7■■□□□ 1.22
LINC00599-201ENST00000517675 CUX1P39880 1505 aa22.67■■□□□ 1.22
LINC00599-201ENST00000517675 PEG3Q9GZU2 1588 aa22.67■■□□□ 1.22
LINC00599-201ENST00000517675 SUPT16HQ9Y5B9 1047 aaKnown RBP22.67■■□□□ 1.22
LINC00599-201ENST00000517675 CUX2O14529 1486 aa22.66■■□□□ 1.22
LINC00599-201ENST00000517675 PRXQ9BXM0 1461 aa22.66■■□□□ 1.22
LINC00599-201ENST00000517675 TOP2BQ02880 1626 aa22.65■■□□□ 1.22
LINC00599-201ENST00000517675 RAB3GAP2Q9H2M9 1393 aa22.65■■□□□ 1.22
LINC00599-201ENST00000517675 TRIM52Q96A61 297 aa22.62■■□□□ 1.21
LINC00599-201ENST00000517675 ARHGAP35Q9NRY4 1499 aa22.59■■□□□ 1.21
LINC00599-201ENST00000517675 CNGB1Q14028 1251 aaPredicted RBP22.57■■□□□ 1.2
LINC00599-201ENST00000517675 IGF1RP08069 1367 aa22.55■■□□□ 1.2
LINC00599-201ENST00000517675 CARMIL1Q5VZK9 1371 aa22.54■■□□□ 1.2
LINC00599-201ENST00000517675 FKBP8Q14318 412 aa22.51■■□□□ 1.19
LINC00599-201ENST00000517675 PHLDB1Q86UU1 1377 aa22.5■■□□□ 1.19
LINC00599-201ENST00000517675 CHIC2Q9UKJ5 165 aa22.49■■□□□ 1.19
LINC00599-201ENST00000517675 CLSPNQ9HAW4 1339 aa22.45■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms