RNA–Protein interactions for RNA: ENST00000517469.1

GRIA1-207, Transcript of glutamate ionotropic receptor AMPA type subunit 1, humanhuman

TSL 4

Gene GRIA1, Length 572 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRIA1-207ENST00000517469 AEBP2Q6ZN18 517 aaPredicted RBP26.49■■□□□ 1.83
GRIA1-207ENST00000517469 CHIC1Q5VXU3 224 aa24.77■■□□□ 1.56
GRIA1-207ENST00000517469 SENP3Q9H4L4 574 aaPredicted RBP22.69■■□□□ 1.22
GRIA1-207ENST00000517469 PHF23Q9BUL5 403 aaPredicted RBP22.31■■□□□ 1.16
GRIA1-207ENST00000517469 FOXD1Q16676 465 aa21.17■□□□□ 0.98
GRIA1-207ENST00000517469 POTEDQ86YR6 584 aa20.21■□□□□ 0.83
GRIA1-207ENST00000517469 MSH5O43196 834 aa20.01■□□□□ 0.79
GRIA1-207ENST00000517469 PIAS4Q8N2W9 510 aaPredicted RBP19.65■□□□□ 0.74
GRIA1-207ENST00000517469 PLPPR3Q6T4P5 718 aa19.59■□□□□ 0.73
GRIA1-207ENST00000517469 PPP6R1Q9UPN7 881 aa19.46■□□□□ 0.71
GRIA1-207ENST00000517469 ADRA2BP18089 450 aa19.34■□□□□ 0.69
GRIA1-207ENST00000517469 DMRT2Q9Y5R5 561 aa17.94■□□□□ 0.46
GRIA1-207ENST00000517469 MAPK8IP2Q13387 824 aaPredicted RBP17.89■□□□□ 0.45
GRIA1-207ENST00000517469 NISCHQ9Y2I1 1504 aa17.77■□□□□ 0.43
GRIA1-207ENST00000517469 SCAF1Q9H7N4 1312 aaKnown RBP17.75■□□□□ 0.43
GRIA1-207ENST00000517469 CACNB1Q02641 598 aaPredicted RBP17.36■□□□□ 0.37
GRIA1-207ENST00000517469 HOXD11P31277 338 aaPredicted RBP17.13■□□□□ 0.33
GRIA1-207ENST00000517469 PPP4R3CPQ6ZMV5 832 aa17.09■□□□□ 0.33
GRIA1-207ENST00000517469 DCAF8L1A6NGE4 600 aa17.08■□□□□ 0.32
GRIA1-207ENST00000517469 RNF39Q9H2S5 420 aa17.03■□□□□ 0.32
GRIA1-207ENST00000517469 CNKSR2Q8WXI2 1034 aa16.9■□□□□ 0.3
GRIA1-207ENST00000517469 RNF216Q9NWF9 866 aaPredicted RBP16.88■□□□□ 0.29
GRIA1-207ENST00000517469 C1QBPQ07021 282 aaKnown RBP16.78■□□□□ 0.28
GRIA1-207ENST00000517469 DNAJC5BQ9UF47 199 aa16.71■□□□□ 0.27
GRIA1-207ENST00000517469 NCBP3Q53F19 620 aaKnown RBP16.32■□□□□ 0.2
GRIA1-207ENST00000517469 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.23■□□□□ 0.19
GRIA1-207ENST00000517469 ABCC9O60706 1549 aa16.17■□□□□ 0.18
GRIA1-207ENST00000517469 NPM3O75607 178 aaKnown RBP16.08■□□□□ 0.16
GRIA1-207ENST00000517469 CCDC180Q9P1Z9 1646 aa15.95■□□□□ 0.14
GRIA1-207ENST00000517469 U3KPZ7 1027 aaPredicted RBP15.89■□□□□ 0.13
GRIA1-207ENST00000517469 DSG3P32926 999 aa15.8■□□□□ 0.12
GRIA1-207ENST00000517469 POTEHQ6S545 545 aa15.75■□□□□ 0.11
GRIA1-207ENST00000517469 SPINK5Q9NQ38 1064 aaPredicted RBP15.74■□□□□ 0.11
GRIA1-207ENST00000517469 CAPN15O75808 1086 aa15.71■□□□□ 0.11
GRIA1-207ENST00000517469 SLC4A2P04920 1241 aa15.48■□□□□ 0.07
GRIA1-207ENST00000517469 APLP2Q06481 763 aa15.42■□□□□ 0.06
GRIA1-207ENST00000517469 ZNF219Q9P2Y4 722 aaPredicted RBP15.38■□□□□ 0.05
GRIA1-207ENST00000517469 KCNA4P22459 653 aa15.36■□□□□ 0.05
GRIA1-207ENST00000517469 TRHP20396 242 aaPredicted RBP15.35■□□□□ 0.05
GRIA1-207ENST00000517469 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.31■□□□□ 0.04
GRIA1-207ENST00000517469 HNRNPUL2Q1KMD3 747 aaKnown RBP15.31■□□□□ 0.04
GRIA1-207ENST00000517469 ABCB7O75027 752 aa15.29■□□□□ 0.04
GRIA1-207ENST00000517469 RB1CC1Q8TDY2 1594 aa15.27■□□□□ 0.03
GRIA1-207ENST00000517469 SAMD1Q6SPF0 538 aaPredicted RBP15.19■□□□□ 0.02
GRIA1-207ENST00000517469 DCAF8L2P0C7V8 631 aa15.14■□□□□ 0.01
GRIA1-207ENST00000517469 NACADO15069 1562 aa15.11■□□□□ 0.01
GRIA1-207ENST00000517469 RBM42Q9BTD8 480 aaKnown RBP15.09■□□□□ 0.01
GRIA1-207ENST00000517469 PABPN1Q86U42 306 aaKnown RBP eCLIP15.06■□□□□ 0
GRIA1-207ENST00000517469 UNC13AQ9UPW8 1703 aa14.93□□□□□ -0.02
GRIA1-207ENST00000517469 CHRDL2Q6WN34 429 aa14.9□□□□□ -0.02
GRIA1-207ENST00000517469 MYCNP04198 464 aaPredicted RBP14.89□□□□□ -0.03
GRIA1-207ENST00000517469 POLA2Q14181 598 aa14.88□□□□□ -0.03
GRIA1-207ENST00000517469 BICRAQ9NZM4 1560 aa14.85□□□□□ -0.03
GRIA1-207ENST00000517469 MYO15BQ96JP2 1530 aa14.82□□□□□ -0.04
GRIA1-207ENST00000517469 ZCCHC6Q5VYS8 1495 aaKnown RBP14.7□□□□□ -0.06
GRIA1-207ENST00000517469 AKT1S1Q96B36 256 aa14.67□□□□□ -0.06
GRIA1-207ENST00000517469 SCRIBQ14160 1630 aa14.64□□□□□ -0.07
GRIA1-207ENST00000517469 DCAF1Q9Y4B6 1507 aa14.61□□□□□ -0.07
GRIA1-207ENST00000517469 ZBTB12Q9Y330 459 aaPredicted RBP14.59□□□□□ -0.07
GRIA1-207ENST00000517469 SP7Q8TDD2 431 aaPredicted RBP14.58□□□□□ -0.08
GRIA1-207ENST00000517469 CC2D2AQ9P2K1 1620 aa14.56□□□□□ -0.08
GRIA1-207ENST00000517469 SHROOM4Q9ULL8 1493 aa14.56□□□□□ -0.08
GRIA1-207ENST00000517469 CECR2Q9BXF3 1484 aa14.55□□□□□ -0.08
GRIA1-207ENST00000517469 ATF5Q9Y2D1 282 aaPredicted RBP14.54□□□□□ -0.08
GRIA1-207ENST00000517469 REM2Q8IYK8 340 aaPredicted RBP14.5□□□□□ -0.09
GRIA1-207ENST00000517469 FOXD4L1Q9NU39 408 aa14.5□□□□□ -0.09
GRIA1-207ENST00000517469 EIF4G1Q04637 1599 aaKnown RBP14.49□□□□□ -0.09
GRIA1-207ENST00000517469 PIP4P2Q8N4L2 257 aa14.45□□□□□ -0.1
GRIA1-207ENST00000517469 OSCARQ8IYS5 282 aa14.41□□□□□ -0.1
GRIA1-207ENST00000517469 SLC4A1APQ9BWU0 796 aaKnown RBP14.41□□□□□ -0.1
GRIA1-207ENST00000517469 FXR2P51116 673 aaKnown RBP eCLIP14.35□□□□□ -0.11
GRIA1-207ENST00000517469 PITPNM1O00562 1244 aa14.33□□□□□ -0.12
GRIA1-207ENST00000517469 HAX1O00165 279 aa14.27□□□□□ -0.13
GRIA1-207ENST00000517469 ATXN8OSP0DMR3 200 aa14.16□□□□□ -0.14
GRIA1-207ENST00000517469 ZBTB22O15209 634 aa14.12□□□□□ -0.15
GRIA1-207ENST00000517469 SPDYE2BA6NHP3 402 aa14.11□□□□□ -0.15
GRIA1-207ENST00000517469 SPDYE6P0CI01 402 aa14.11□□□□□ -0.15
GRIA1-207ENST00000517469 SPDYE2Q495Y8 402 aa14.11□□□□□ -0.15
GRIA1-207ENST00000517469 EVX2Q03828 476 aa14.08□□□□□ -0.16
GRIA1-207ENST00000517469 DNAJC5Q9H3Z4 198 aa14.04□□□□□ -0.16
GRIA1-207ENST00000517469 FBLN2P98095 1184 aa14.02□□□□□ -0.17
GRIA1-207ENST00000517469 ERCC6Q03468 1493 aa13.96□□□□□ -0.17
GRIA1-207ENST00000517469 SPDYE1Q8NFV5 336 aaPredicted RBP13.96□□□□□ -0.17
GRIA1-207ENST00000517469 NCAPD3P42695 1498 aa13.95□□□□□ -0.18
GRIA1-207ENST00000517469 PRKAR2AP13861 404 aaKnown RBP13.94□□□□□ -0.18
GRIA1-207ENST00000517469 ATAD2BQ9ULI0 1458 aa13.93□□□□□ -0.18
GRIA1-207ENST00000517469 CUX2O14529 1486 aa13.91□□□□□ -0.18
GRIA1-207ENST00000517469 C19orf67A6NJJ6 358 aa13.9□□□□□ -0.18
GRIA1-207ENST00000517469 SMARCA4P51532 1647 aa13.9□□□□□ -0.19
GRIA1-207ENST00000517469 SSUH2Q9Y2M2 353 aa13.89□□□□□ -0.19
GRIA1-207ENST00000517469 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
GRIA1-207ENST00000517469 CLEC11AQ9Y240 323 aa13.87□□□□□ -0.19
GRIA1-207ENST00000517469 SMARCA2P51531 1590 aa13.87□□□□□ -0.19
GRIA1-207ENST00000517469 NESP48681 1621 aa13.86□□□□□ -0.19
GRIA1-207ENST00000517469 HMGXB3Q12766 1538 aa13.85□□□□□ -0.19
GRIA1-207ENST00000517469 ZNF692Q9BU19 519 aaPredicted RBP13.82□□□□□ -0.2
GRIA1-207ENST00000517469 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
GRIA1-207ENST00000517469 BAZ1AQ9NRL2 1556 aaPredicted RBP13.79□□□□□ -0.2
GRIA1-207ENST00000517469 GABBR2O75899 941 aa13.75□□□□□ -0.21
GRIA1-207ENST00000517469 MROH2BQ7Z745 1585 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms