RNA–Protein interactions for RNA: ENST00000515533.1

CDC42SE2-212, Transcript of CDC42 small effector 2, humanhuman

TSL 4

Gene CDC42SE2, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-212ENST00000515533 AEBP2Q6ZN18 517 aaPredicted RBP31.32■■■□□ 2.6
CDC42SE2-212ENST00000515533 CHIC1Q5VXU3 224 aa29.46■■■□□ 2.31
CDC42SE2-212ENST00000515533 SENP3Q9H4L4 574 aaPredicted RBP26.75■■□□□ 1.87
CDC42SE2-212ENST00000515533 PHF23Q9BUL5 403 aaPredicted RBP26.36■■□□□ 1.81
CDC42SE2-212ENST00000515533 FOXD1Q16676 465 aa24.97■■□□□ 1.59
CDC42SE2-212ENST00000515533 POTEDQ86YR6 584 aa24.85■■□□□ 1.57
CDC42SE2-212ENST00000515533 MSH5O43196 834 aa23.52■■□□□ 1.36
CDC42SE2-212ENST00000515533 PLPPR3Q6T4P5 718 aa23.4■■□□□ 1.34
CDC42SE2-212ENST00000515533 PIAS4Q8N2W9 510 aaPredicted RBP23.26■■□□□ 1.31
CDC42SE2-212ENST00000515533 PPP6R1Q9UPN7 881 aa23.14■■□□□ 1.29
CDC42SE2-212ENST00000515533 ADRA2BP18089 450 aa23.04■■□□□ 1.28
CDC42SE2-212ENST00000515533 NISCHQ9Y2I1 1504 aa22.31■■□□□ 1.16
CDC42SE2-212ENST00000515533 MAPK8IP2Q13387 824 aaPredicted RBP21.25■□□□□ 0.99
CDC42SE2-212ENST00000515533 DMRT2Q9Y5R5 561 aa21.17■□□□□ 0.98
CDC42SE2-212ENST00000515533 SCAF1Q9H7N4 1312 aaKnown RBP21.05■□□□□ 0.96
CDC42SE2-212ENST00000515533 CACNB1Q02641 598 aaPredicted RBP20.81■□□□□ 0.92
CDC42SE2-212ENST00000515533 PPP4R3CPQ6ZMV5 832 aa20.48■□□□□ 0.87
CDC42SE2-212ENST00000515533 DCAF8L1A6NGE4 600 aa20.3■□□□□ 0.84
CDC42SE2-212ENST00000515533 HOXD11P31277 338 aaPredicted RBP20.28■□□□□ 0.84
CDC42SE2-212ENST00000515533 CNKSR2Q8WXI2 1034 aa20.15■□□□□ 0.82
CDC42SE2-212ENST00000515533 CCDC180Q9P1Z9 1646 aa20.15■□□□□ 0.82
CDC42SE2-212ENST00000515533 ABCC9O60706 1549 aa20.1■□□□□ 0.81
CDC42SE2-212ENST00000515533 RNF39Q9H2S5 420 aa20.06■□□□□ 0.8
CDC42SE2-212ENST00000515533 RNF216Q9NWF9 866 aaPredicted RBP20.05■□□□□ 0.8
CDC42SE2-212ENST00000515533 C1QBPQ07021 282 aaKnown RBP19.69■□□□□ 0.74
CDC42SE2-212ENST00000515533 DNAJC5BQ9UF47 199 aa19.63■□□□□ 0.73
CDC42SE2-212ENST00000515533 NCBP3Q53F19 620 aaKnown RBP19.59■□□□□ 0.73
CDC42SE2-212ENST00000515533 NPM3O75607 178 aaKnown RBP19.33■□□□□ 0.68
CDC42SE2-212ENST00000515533 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.31■□□□□ 0.68
CDC42SE2-212ENST00000515533 POTEHQ6S545 545 aa19.23■□□□□ 0.67
CDC42SE2-212ENST00000515533 RB1CC1Q8TDY2 1594 aa19.17■□□□□ 0.66
CDC42SE2-212ENST00000515533 NACADO15069 1562 aa19■□□□□ 0.63
CDC42SE2-212ENST00000515533 U3KPZ7 1027 aaPredicted RBP18.89■□□□□ 0.61
CDC42SE2-212ENST00000515533 DCAF8L2P0C7V8 631 aa18.85■□□□□ 0.61
CDC42SE2-212ENST00000515533 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.61
CDC42SE2-212ENST00000515533 KCNA4P22459 653 aa18.71■□□□□ 0.59
CDC42SE2-212ENST00000515533 SPINK5Q9NQ38 1064 aaPredicted RBP18.7■□□□□ 0.58
CDC42SE2-212ENST00000515533 MYO15BQ96JP2 1530 aa18.69■□□□□ 0.58
CDC42SE2-212ENST00000515533 CAPN15O75808 1086 aa18.67■□□□□ 0.58
CDC42SE2-212ENST00000515533 PABPN1Q86U42 306 aaKnown RBP eCLIP18.65■□□□□ 0.58
CDC42SE2-212ENST00000515533 DSG3P32926 999 aa18.64■□□□□ 0.57
CDC42SE2-212ENST00000515533 BICRAQ9NZM4 1560 aa18.56■□□□□ 0.56
CDC42SE2-212ENST00000515533 SLC4A2P04920 1241 aa18.54■□□□□ 0.56
CDC42SE2-212ENST00000515533 ZCCHC6Q5VYS8 1495 aaKnown RBP18.48■□□□□ 0.55
CDC42SE2-212ENST00000515533 DCAF1Q9Y4B6 1507 aa18.44■□□□□ 0.54
CDC42SE2-212ENST00000515533 SHROOM4Q9ULL8 1493 aa18.33■□□□□ 0.53
CDC42SE2-212ENST00000515533 SCRIBQ14160 1630 aa18.31■□□□□ 0.52
CDC42SE2-212ENST00000515533 TRHP20396 242 aaPredicted RBP18.3■□□□□ 0.52
CDC42SE2-212ENST00000515533 APLP2Q06481 763 aa18.3■□□□□ 0.52
CDC42SE2-212ENST00000515533 ZNF219Q9P2Y4 722 aaPredicted RBP18.26■□□□□ 0.51
CDC42SE2-212ENST00000515533 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.23■□□□□ 0.51
CDC42SE2-212ENST00000515533 HNRNPUL2Q1KMD3 747 aaKnown RBP18.23■□□□□ 0.51
CDC42SE2-212ENST00000515533 ABCB7O75027 752 aa18.22■□□□□ 0.51
CDC42SE2-212ENST00000515533 CC2D2AQ9P2K1 1620 aa18.2■□□□□ 0.5
CDC42SE2-212ENST00000515533 EIF4G1Q04637 1599 aaKnown RBP18.14■□□□□ 0.49
CDC42SE2-212ENST00000515533 SAMD1Q6SPF0 538 aaPredicted RBP18.13■□□□□ 0.49
CDC42SE2-212ENST00000515533 CECR2Q9BXF3 1484 aa18.12■□□□□ 0.49
CDC42SE2-212ENST00000515533 MYCNP04198 464 aaPredicted RBP17.88■□□□□ 0.45
CDC42SE2-212ENST00000515533 RBM42Q9BTD8 480 aaKnown RBP17.78■□□□□ 0.44
CDC42SE2-212ENST00000515533 POLA2Q14181 598 aa17.75■□□□□ 0.43
CDC42SE2-212ENST00000515533 CHRDL2Q6WN34 429 aa17.59■□□□□ 0.41
CDC42SE2-212ENST00000515533 SLC4A1APQ9BWU0 796 aaKnown RBP17.59■□□□□ 0.41
CDC42SE2-212ENST00000515533 FOXD4L1Q9NU39 408 aa17.54■□□□□ 0.4
CDC42SE2-212ENST00000515533 SP7Q8TDD2 431 aaPredicted RBP17.52■□□□□ 0.4
CDC42SE2-212ENST00000515533 ATF5Q9Y2D1 282 aaPredicted RBP17.51■□□□□ 0.39
CDC42SE2-212ENST00000515533 NCAPD3P42695 1498 aa17.48■□□□□ 0.39
CDC42SE2-212ENST00000515533 SMARCA4P51532 1647 aa17.47■□□□□ 0.39
CDC42SE2-212ENST00000515533 SMARCA2P51531 1590 aa17.44■□□□□ 0.38
CDC42SE2-212ENST00000515533 ATAD2BQ9ULI0 1458 aa17.43■□□□□ 0.38
CDC42SE2-212ENST00000515533 HMGXB3Q12766 1538 aa17.41■□□□□ 0.38
CDC42SE2-212ENST00000515533 ERCC6Q03468 1493 aa17.4■□□□□ 0.38
CDC42SE2-212ENST00000515533 BAZ1AQ9NRL2 1556 aaPredicted RBP17.36■□□□□ 0.37
CDC42SE2-212ENST00000515533 ZBTB12Q9Y330 459 aaPredicted RBP17.36■□□□□ 0.37
CDC42SE2-212ENST00000515533 CUX2O14529 1486 aa17.36■□□□□ 0.37
CDC42SE2-212ENST00000515533 DNAJC5Q9H3Z4 198 aa17.34■□□□□ 0.37
CDC42SE2-212ENST00000515533 AKT1S1Q96B36 256 aa17.32■□□□□ 0.36
CDC42SE2-212ENST00000515533 BAZ1BQ9UIG0 1483 aaKnown RBP17.3■□□□□ 0.36
CDC42SE2-212ENST00000515533 PEG3Q9GZU2 1588 aa17.27■□□□□ 0.35
CDC42SE2-212ENST00000515533 NESP48681 1621 aa17.25■□□□□ 0.35
CDC42SE2-212ENST00000515533 ZBTB22O15209 634 aa17.21■□□□□ 0.35
CDC42SE2-212ENST00000515533 OSCARQ8IYS5 282 aa17.21■□□□□ 0.35
CDC42SE2-212ENST00000515533 MROH2BQ7Z745 1585 aa17.19■□□□□ 0.34
CDC42SE2-212ENST00000515533 LAMC3Q9Y6N6 1575 aa17.18■□□□□ 0.34
CDC42SE2-212ENST00000515533 REM2Q8IYK8 340 aaPredicted RBP17.16■□□□□ 0.34
CDC42SE2-212ENST00000515533 THOC2Q8NI27 1593 aaKnown RBP17.14■□□□□ 0.33
CDC42SE2-212ENST00000515533 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
CDC42SE2-212ENST00000515533 PIP4P2Q8N4L2 257 aa17.04■□□□□ 0.32
CDC42SE2-212ENST00000515533 PDS5BQ9NTI5 1447 aa17.04■□□□□ 0.32
CDC42SE2-212ENST00000515533 WIZO95785 1651 aa17.04■□□□□ 0.32
CDC42SE2-212ENST00000515533 ATXN8OSP0DMR3 200 aa17.02■□□□□ 0.32
CDC42SE2-212ENST00000515533 PITPNM1O00562 1244 aa16.98■□□□□ 0.31
CDC42SE2-212ENST00000515533 CADPSQ9ULU8 1353 aa16.95■□□□□ 0.3
CDC42SE2-212ENST00000515533 MRC2Q9UBG0 1479 aa16.89■□□□□ 0.29
CDC42SE2-212ENST00000515533 FXR2P51116 673 aaKnown RBP eCLIP16.89■□□□□ 0.29
CDC42SE2-212ENST00000515533 WDR62O43379 1518 aa16.86■□□□□ 0.29
CDC42SE2-212ENST00000515533 HAX1O00165 279 aa16.86■□□□□ 0.29
CDC42SE2-212ENST00000515533 CEP164Q9UPV0 1460 aa16.84■□□□□ 0.29
CDC42SE2-212ENST00000515533 FBLN2P98095 1184 aa16.82■□□□□ 0.28
CDC42SE2-212ENST00000515533 SPDYE2BA6NHP3 402 aa16.81■□□□□ 0.28
CDC42SE2-212ENST00000515533 SPDYE6P0CI01 402 aa16.81■□□□□ 0.28
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