RNA–Protein interactions for RNA: ENST00000512248.5

GIN1-205, Transcript of gypsy retrotransposon integrase 1, humanhuman

TSL 1 (best)

Gene GIN1, Length 3,325 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GIN1-205ENST00000512248 NISCHQ9Y2I1 1504 aa15.72■□□□□ 0.11
GIN1-205ENST00000512248 AEBP2Q6ZN18 517 aaPredicted RBP14.42□□□□□ -0.1
GIN1-205ENST00000512248 SHROOM4Q9ULL8 1493 aa14.26□□□□□ -0.13
GIN1-205ENST00000512248 SUPT5HO00267 1087 aaKnown RBP14.12□□□□□ -0.15
GIN1-205ENST00000512248 CHIC1Q5VXU3 224 aa14.09□□□□□ -0.15
GIN1-205ENST00000512248 DCAF8L2P0C7V8 631 aa13.78□□□□□ -0.2
GIN1-205ENST00000512248 PCGF6Q9BYE7 350 aa13.66□□□□□ -0.22
GIN1-205ENST00000512248 PPARGC1BQ86YN6 1023 aaKnown RBP13.6□□□□□ -0.23
GIN1-205ENST00000512248 HRCP23327 699 aa13.57□□□□□ -0.24
GIN1-205ENST00000512248 MYO15BQ96JP2 1530 aa13.56□□□□□ -0.24
GIN1-205ENST00000512248 LOC105371045A0A1W2PR82 267 aa13.44□□□□□ -0.26
GIN1-205ENST00000512248 EHMT2Q96KQ7 1210 aa13.28□□□□□ -0.28
GIN1-205ENST00000512248 ZCCHC6Q5VYS8 1495 aaKnown RBP13.28□□□□□ -0.28
GIN1-205ENST00000512248 PELP1Q8IZL8 1130 aaKnown RBP13.17□□□□□ -0.3
GIN1-205ENST00000512248 FAM9AQ8IZU1 332 aaPredicted RBP13.15□□□□□ -0.3
GIN1-205ENST00000512248 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
GIN1-205ENST00000512248 CCDC180Q9P1Z9 1646 aa13.04□□□□□ -0.32
GIN1-205ENST00000512248 MYT1Q01538 1121 aa12.95□□□□□ -0.34
GIN1-205ENST00000512248 DCAF1Q9Y4B6 1507 aa12.95□□□□□ -0.34
GIN1-205ENST00000512248 TRIM41Q8WV44 630 aa12.94□□□□□ -0.34
GIN1-205ENST00000512248 TTBK1Q5TCY1 1321 aaPredicted RBP12.86□□□□□ -0.35
GIN1-205ENST00000512248 SCAF1Q9H7N4 1312 aaKnown RBP12.8□□□□□ -0.36
GIN1-205ENST00000512248 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.76□□□□□ -0.37
GIN1-205ENST00000512248 ZEB1P37275 1124 aaPredicted RBP12.73□□□□□ -0.37
GIN1-205ENST00000512248 RSF1Q96T23 1441 aaPredicted RBP12.67□□□□□ -0.38
GIN1-205ENST00000512248 CCER1Q8TC90 406 aaPredicted RBP12.66□□□□□ -0.38
GIN1-205ENST00000512248 SCRIBQ14160 1630 aa12.65□□□□□ -0.38
GIN1-205ENST00000512248 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
GIN1-205ENST00000512248 PRKCSHP14314 528 aaPredicted RBP12.62□□□□□ -0.39
GIN1-205ENST00000512248 RB1CC1Q8TDY2 1594 aa12.59□□□□□ -0.39
GIN1-205ENST00000512248 NEUROD1Q13562 356 aa12.58□□□□□ -0.4
GIN1-205ENST00000512248 ABCC9O60706 1549 aa12.54□□□□□ -0.4
GIN1-205ENST00000512248 GTF3C3Q9Y5Q9 886 aa12.5□□□□□ -0.41
GIN1-205ENST00000512248 YTHDC1Q96MU7 727 aaKnown RBP12.5□□□□□ -0.41
GIN1-205ENST00000512248 CECR2Q9BXF3 1484 aa12.49□□□□□ -0.41
GIN1-205ENST00000512248 ACIN1Q9UKV3 1341 aaKnown RBP12.49□□□□□ -0.41
GIN1-205ENST00000512248 DIEXFQ68CQ4 756 aaKnown RBP12.49□□□□□ -0.41
GIN1-205ENST00000512248 RANGAP1P46060 587 aaPredicted RBP12.4□□□□□ -0.42
GIN1-205ENST00000512248 UBTFP17480 764 aaKnown RBP12.38□□□□□ -0.43
GIN1-205ENST00000512248 MROH2BQ7Z745 1585 aa12.38□□□□□ -0.43
GIN1-205ENST00000512248 CENPBP07199 599 aaPredicted RBP12.35□□□□□ -0.43
GIN1-205ENST00000512248 HNRNPUL2Q1KMD3 747 aaKnown RBP12.35□□□□□ -0.43
GIN1-205ENST00000512248 WIZO95785 1651 aa12.32□□□□□ -0.44
GIN1-205ENST00000512248 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
GIN1-205ENST00000512248 ABCC8Q09428 1581 aa12.26□□□□□ -0.45
GIN1-205ENST00000512248 CCDC88BA6NC98 1476 aa12.25□□□□□ -0.45
GIN1-205ENST00000512248 SOGA1O94964 1423 aa12.24□□□□□ -0.45
GIN1-205ENST00000512248 ZNF316A6NFI3 1004 aaPredicted RBP12.24□□□□□ -0.45
GIN1-205ENST00000512248 MIER1Q8N108 512 aa12.24□□□□□ -0.45
GIN1-205ENST00000512248 CEP162Q5TB80 1403 aa12.21□□□□□ -0.45
GIN1-205ENST00000512248 BCL11AQ9H165 835 aa12.2□□□□□ -0.46
GIN1-205ENST00000512248 RUSC2Q8N2Y8 1516 aa12.2□□□□□ -0.46
GIN1-205ENST00000512248 ERICH6Q7L0X2 663 aa12.19□□□□□ -0.46
GIN1-205ENST00000512248 CSRNP3Q8WYN3 585 aa12.19□□□□□ -0.46
GIN1-205ENST00000512248 PABPN1Q86U42 306 aaKnown RBP eCLIP12.15□□□□□ -0.46
GIN1-205ENST00000512248 APLP2Q06481 763 aa12.08□□□□□ -0.48
GIN1-205ENST00000512248 TNIKQ9UKE5 1360 aa12.06□□□□□ -0.48
GIN1-205ENST00000512248 NACADO15069 1562 aa12.03□□□□□ -0.48
GIN1-205ENST00000512248 BAZ1AQ9NRL2 1556 aaPredicted RBP12.03□□□□□ -0.48
GIN1-205ENST00000512248 WRNQ14191 1432 aaPredicted RBP eCLIP12.03□□□□□ -0.48
GIN1-205ENST00000512248 ITGAEP38570 1179 aa12.03□□□□□ -0.48
GIN1-205ENST00000512248 EIF4G1Q04637 1599 aaKnown RBP11.98□□□□□ -0.49
GIN1-205ENST00000512248 SMARCA2P51531 1590 aa11.94□□□□□ -0.5
GIN1-205ENST00000512248 GOLGA3Q08378 1498 aa11.94□□□□□ -0.5
GIN1-205ENST00000512248 CLIP1P30622 1438 aa11.94□□□□□ -0.5
GIN1-205ENST00000512248 TOP2AP11388 1531 aaKnown RBP11.93□□□□□ -0.5
GIN1-205ENST00000512248 BCANQ96GW7 911 aa11.92□□□□□ -0.5
GIN1-205ENST00000512248 KCNH8Q96L42 1107 aa11.91□□□□□ -0.5
GIN1-205ENST00000512248 KANK4Q5T7N3 995 aaPredicted RBP11.89□□□□□ -0.51
GIN1-205ENST00000512248 SMARCA4P51532 1647 aa11.88□□□□□ -0.51
GIN1-205ENST00000512248 SUPT16HQ9Y5B9 1047 aaKnown RBP11.87□□□□□ -0.51
GIN1-205ENST00000512248 RAPGEF2Q9Y4G8 1499 aa11.86□□□□□ -0.51
GIN1-205ENST00000512248 EEA1Q15075 1411 aa11.84□□□□□ -0.51
GIN1-205ENST00000512248 HIRIP3Q9BW71 556 aaPredicted RBP11.84□□□□□ -0.51
GIN1-205ENST00000512248 SENP3Q9H4L4 574 aaPredicted RBP11.84□□□□□ -0.51
GIN1-205ENST00000512248 VPS8Q8N3P4 1428 aa11.82□□□□□ -0.52
GIN1-205ENST00000512248 CEP164Q9UPV0 1460 aa11.82□□□□□ -0.52
GIN1-205ENST00000512248 SYNJ1O43426 1573 aa11.8□□□□□ -0.52
GIN1-205ENST00000512248 ATP1B4Q9UN42 357 aaPredicted RBP11.79□□□□□ -0.52
GIN1-205ENST00000512248 DHX57Q6P158 1386 aaKnown RBP11.79□□□□□ -0.52
GIN1-205ENST00000512248 DDX10Q13206 875 aaKnown RBP11.76□□□□□ -0.53
GIN1-205ENST00000512248 TSHZ2Q9NRE2 1034 aa11.75□□□□□ -0.53
GIN1-205ENST00000512248 SIN3AQ96ST3 1273 aa11.74□□□□□ -0.53
GIN1-205ENST00000512248 KIF21BO75037 1637 aa11.73□□□□□ -0.53
GIN1-205ENST00000512248 FKBP8Q14318 412 aa11.72□□□□□ -0.53
GIN1-205ENST00000512248 P3H3Q8IVL6 736 aa11.72□□□□□ -0.53
GIN1-205ENST00000512248 UNC13AQ9UPW8 1703 aa11.72□□□□□ -0.53
GIN1-205ENST00000512248 TRIM52Q96A61 297 aa11.71□□□□□ -0.54
GIN1-205ENST00000512248 FAM50AQ14320 339 aaKnown RBP11.7□□□□□ -0.54
GIN1-205ENST00000512248 EIF5BO60841 1220 aaKnown RBP11.65□□□□□ -0.54
GIN1-205ENST00000512248 BAZ1BQ9UIG0 1483 aaKnown RBP11.64□□□□□ -0.55
GIN1-205ENST00000512248 ARAP1Q96P48 1450 aa11.63□□□□□ -0.55
GIN1-205ENST00000512248 ATAD2BQ9ULI0 1458 aa11.61□□□□□ -0.55
GIN1-205ENST00000512248 CCNB3Q8WWL7 1395 aa11.61□□□□□ -0.55
GIN1-205ENST00000512248 RAB3GAP2Q9H2M9 1393 aa11.61□□□□□ -0.55
GIN1-205ENST00000512248 IRX6P78412 446 aaPredicted RBP11.61□□□□□ -0.55
GIN1-205ENST00000512248 DAXXQ9UER7 740 aaPredicted RBP11.6□□□□□ -0.55
GIN1-205ENST00000512248 CLSPNQ9HAW4 1339 aa11.6□□□□□ -0.55
GIN1-205ENST00000512248 ANP32EQ9BTT0 268 aa11.6□□□□□ -0.55
GIN1-205ENST00000512248 PLEKHG5O94827 1062 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms