RNA–Protein interactions for RNA: ENST00000512156.1

SEMA6A-211, Transcript of semaphorin 6A, humanhuman

TSL 2

Gene SEMA6A, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6A-211ENST00000512156 AEBP2Q6ZN18 517 aaPredicted RBP29.58■■■□□ 2.33
SEMA6A-211ENST00000512156 CHIC1Q5VXU3 224 aa27.69■■■□□ 2.02
SEMA6A-211ENST00000512156 SENP3Q9H4L4 574 aaPredicted RBP25.39■■□□□ 1.66
SEMA6A-211ENST00000512156 PHF23Q9BUL5 403 aaPredicted RBP24.92■■□□□ 1.58
SEMA6A-211ENST00000512156 FOXD1Q16676 465 aa23.7■■□□□ 1.38
SEMA6A-211ENST00000512156 POTEDQ86YR6 584 aa23■■□□□ 1.27
SEMA6A-211ENST00000512156 MSH5O43196 834 aa22.47■■□□□ 1.19
SEMA6A-211ENST00000512156 PIAS4Q8N2W9 510 aaPredicted RBP22.02■■□□□ 1.12
SEMA6A-211ENST00000512156 PLPPR3Q6T4P5 718 aa21.69■■□□□ 1.06
SEMA6A-211ENST00000512156 PPP6R1Q9UPN7 881 aa21.64■■□□□ 1.05
SEMA6A-211ENST00000512156 ADRA2BP18089 450 aa21.54■■□□□ 1.04
SEMA6A-211ENST00000512156 NISCHQ9Y2I1 1504 aa20.29■□□□□ 0.84
SEMA6A-211ENST00000512156 DMRT2Q9Y5R5 561 aa20.02■□□□□ 0.8
SEMA6A-211ENST00000512156 MAPK8IP2Q13387 824 aaPredicted RBP19.97■□□□□ 0.79
SEMA6A-211ENST00000512156 SCAF1Q9H7N4 1312 aaKnown RBP19.76■□□□□ 0.75
SEMA6A-211ENST00000512156 CACNB1Q02641 598 aaPredicted RBP19.66■□□□□ 0.74
SEMA6A-211ENST00000512156 DCAF8L1A6NGE4 600 aa19.23■□□□□ 0.67
SEMA6A-211ENST00000512156 RNF39Q9H2S5 420 aa19.1■□□□□ 0.65
SEMA6A-211ENST00000512156 HOXD11P31277 338 aaPredicted RBP19.02■□□□□ 0.64
SEMA6A-211ENST00000512156 PPP4R3CPQ6ZMV5 832 aa18.9■□□□□ 0.62
SEMA6A-211ENST00000512156 C1QBPQ07021 282 aaKnown RBP18.79■□□□□ 0.6
SEMA6A-211ENST00000512156 CNKSR2Q8WXI2 1034 aa18.72■□□□□ 0.59
SEMA6A-211ENST00000512156 RNF216Q9NWF9 866 aaPredicted RBP18.72■□□□□ 0.59
SEMA6A-211ENST00000512156 DNAJC5BQ9UF47 199 aa18.52■□□□□ 0.56
SEMA6A-211ENST00000512156 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.13■□□□□ 0.49
SEMA6A-211ENST00000512156 CCDC180Q9P1Z9 1646 aa18.1■□□□□ 0.49
SEMA6A-211ENST00000512156 NCBP3Q53F19 620 aaKnown RBP18.02■□□□□ 0.48
SEMA6A-211ENST00000512156 POTEHQ6S545 545 aa17.9■□□□□ 0.46
SEMA6A-211ENST00000512156 ABCC9O60706 1549 aa17.78■□□□□ 0.44
SEMA6A-211ENST00000512156 NPM3O75607 178 aaKnown RBP17.73■□□□□ 0.43
SEMA6A-211ENST00000512156 U3KPZ7 1027 aaPredicted RBP17.68■□□□□ 0.42
SEMA6A-211ENST00000512156 DSG3P32926 999 aa17.66■□□□□ 0.42
SEMA6A-211ENST00000512156 CAPN15O75808 1086 aa17.62■□□□□ 0.41
SEMA6A-211ENST00000512156 SPINK5Q9NQ38 1064 aaPredicted RBP17.6■□□□□ 0.41
SEMA6A-211ENST00000512156 TRHP20396 242 aaPredicted RBP17.17■□□□□ 0.34
SEMA6A-211ENST00000512156 APLP2Q06481 763 aa17.16■□□□□ 0.34
SEMA6A-211ENST00000512156 ZNF219Q9P2Y4 722 aaPredicted RBP17.15■□□□□ 0.34
SEMA6A-211ENST00000512156 ABCB7O75027 752 aa17.14■□□□□ 0.33
SEMA6A-211ENST00000512156 RB1CC1Q8TDY2 1594 aa17.1■□□□□ 0.33
SEMA6A-211ENST00000512156 SLC4A2P04920 1241 aa17.08■□□□□ 0.32
SEMA6A-211ENST00000512156 NACADO15069 1562 aa17.05■□□□□ 0.32
SEMA6A-211ENST00000512156 DCAF8L2P0C7V8 631 aa17■□□□□ 0.31
SEMA6A-211ENST00000512156 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP16.98■□□□□ 0.31
SEMA6A-211ENST00000512156 HNRNPUL2Q1KMD3 747 aaKnown RBP16.98■□□□□ 0.31
SEMA6A-211ENST00000512156 MYO15BQ96JP2 1530 aa16.92■□□□□ 0.3
SEMA6A-211ENST00000512156 RBM42Q9BTD8 480 aaKnown RBP16.91■□□□□ 0.3
SEMA6A-211ENST00000512156 ZCCHC6Q5VYS8 1495 aaKnown RBP16.88■□□□□ 0.29
SEMA6A-211ENST00000512156 SAMD1Q6SPF0 538 aaPredicted RBP16.84■□□□□ 0.29
SEMA6A-211ENST00000512156 KCNA4P22459 653 aa16.81■□□□□ 0.28
SEMA6A-211ENST00000512156 DCAF1Q9Y4B6 1507 aa16.8■□□□□ 0.28
SEMA6A-211ENST00000512156 CHRDL2Q6WN34 429 aa16.77■□□□□ 0.28
SEMA6A-211ENST00000512156 UNC13AQ9UPW8 1703 aa16.65■□□□□ 0.26
SEMA6A-211ENST00000512156 PABPN1Q86U42 306 aaKnown RBP eCLIP16.59■□□□□ 0.25
SEMA6A-211ENST00000512156 POLA2Q14181 598 aa16.55■□□□□ 0.24
SEMA6A-211ENST00000512156 BICRAQ9NZM4 1560 aa16.54■□□□□ 0.24
SEMA6A-211ENST00000512156 SP7Q8TDD2 431 aaPredicted RBP16.49■□□□□ 0.23
SEMA6A-211ENST00000512156 SCRIBQ14160 1630 aa16.48■□□□□ 0.23
SEMA6A-211ENST00000512156 MYCNP04198 464 aaPredicted RBP16.44■□□□□ 0.22
SEMA6A-211ENST00000512156 SHROOM4Q9ULL8 1493 aa16.42■□□□□ 0.22
SEMA6A-211ENST00000512156 AKT1S1Q96B36 256 aa16.36■□□□□ 0.21
SEMA6A-211ENST00000512156 PIP4P2Q8N4L2 257 aa16.22■□□□□ 0.19
SEMA6A-211ENST00000512156 ZBTB12Q9Y330 459 aaPredicted RBP16.22■□□□□ 0.19
SEMA6A-211ENST00000512156 REM2Q8IYK8 340 aaPredicted RBP16.19■□□□□ 0.18
SEMA6A-211ENST00000512156 EIF4G1Q04637 1599 aaKnown RBP16.13■□□□□ 0.17
SEMA6A-211ENST00000512156 HAX1O00165 279 aa16.1■□□□□ 0.17
SEMA6A-211ENST00000512156 OSCARQ8IYS5 282 aa16.08■□□□□ 0.16
SEMA6A-211ENST00000512156 CC2D2AQ9P2K1 1620 aa16.08■□□□□ 0.16
SEMA6A-211ENST00000512156 ATF5Q9Y2D1 282 aaPredicted RBP16.06■□□□□ 0.16
SEMA6A-211ENST00000512156 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
SEMA6A-211ENST00000512156 FXR2P51116 673 aaKnown RBP eCLIP16.02■□□□□ 0.16
SEMA6A-211ENST00000512156 CECR2Q9BXF3 1484 aa16.01■□□□□ 0.15
SEMA6A-211ENST00000512156 FOXD4L1Q9NU39 408 aa15.91■□□□□ 0.14
SEMA6A-211ENST00000512156 EVX2Q03828 476 aa15.81■□□□□ 0.12
SEMA6A-211ENST00000512156 SMARCA4P51532 1647 aa15.76■□□□□ 0.11
SEMA6A-211ENST00000512156 BAZ1AQ9NRL2 1556 aaPredicted RBP15.75■□□□□ 0.11
SEMA6A-211ENST00000512156 SLC4A1APQ9BWU0 796 aaKnown RBP15.75■□□□□ 0.11
SEMA6A-211ENST00000512156 NCAPD3P42695 1498 aa15.73■□□□□ 0.11
SEMA6A-211ENST00000512156 SMARCA2P51531 1590 aa15.71■□□□□ 0.11
SEMA6A-211ENST00000512156 ATAD2BQ9ULI0 1458 aa15.71■□□□□ 0.1
SEMA6A-211ENST00000512156 SPDYE2BA6NHP3 402 aa15.65■□□□□ 0.1
SEMA6A-211ENST00000512156 SPDYE6P0CI01 402 aa15.65■□□□□ 0.1
SEMA6A-211ENST00000512156 SPDYE2Q495Y8 402 aa15.65■□□□□ 0.1
SEMA6A-211ENST00000512156 HMGXB3Q12766 1538 aa15.64■□□□□ 0.09
SEMA6A-211ENST00000512156 MROH2BQ7Z745 1585 aa15.62■□□□□ 0.09
SEMA6A-211ENST00000512156 PEG3Q9GZU2 1588 aa15.62■□□□□ 0.09
SEMA6A-211ENST00000512156 PRKAR2AP13861 404 aaKnown RBP15.61■□□□□ 0.09
SEMA6A-211ENST00000512156 BAZ1BQ9UIG0 1483 aaKnown RBP15.59■□□□□ 0.09
SEMA6A-211ENST00000512156 FBLN2P98095 1184 aa15.54■□□□□ 0.08
SEMA6A-211ENST00000512156 SPDYE1Q8NFV5 336 aaPredicted RBP15.54■□□□□ 0.08
SEMA6A-211ENST00000512156 C19orf67A6NJJ6 358 aa15.53■□□□□ 0.08
SEMA6A-211ENST00000512156 CLEC11AQ9Y240 323 aa15.52■□□□□ 0.08
SEMA6A-211ENST00000512156 ATXN8OSP0DMR3 200 aa15.49■□□□□ 0.07
SEMA6A-211ENST00000512156 GABBR2O75899 941 aa15.45■□□□□ 0.06
SEMA6A-211ENST00000512156 LHX8Q68G74 356 aa15.44■□□□□ 0.06
SEMA6A-211ENST00000512156 WIZO95785 1651 aa15.44■□□□□ 0.06
SEMA6A-211ENST00000512156 ZBTB22O15209 634 aa15.43■□□□□ 0.06
SEMA6A-211ENST00000512156 RSF1Q96T23 1441 aaPredicted RBP15.42■□□□□ 0.06
SEMA6A-211ENST00000512156 ERCC6Q03468 1493 aa15.37■□□□□ 0.05
SEMA6A-211ENST00000512156 SSUH2Q9Y2M2 353 aa15.36■□□□□ 0.05
SEMA6A-211ENST00000512156 NESP48681 1621 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms