RNA–Protein interactions for RNA: ENST00000509154.6

SNCAIP-212, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 2,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-212ENST00000509154 NISCHQ9Y2I1 1504 aa24.56■■□□□ 1.52
SNCAIP-212ENST00000509154 SHROOM4Q9ULL8 1493 aa21.45■■□□□ 1.02
SNCAIP-212ENST00000509154 SUPT5HO00267 1087 aaKnown RBP21.1■□□□□ 0.97
SNCAIP-212ENST00000509154 ZCCHC6Q5VYS8 1495 aaKnown RBP20.81■□□□□ 0.92
SNCAIP-212ENST00000509154 DCAF8L2P0C7V8 631 aa20.63■□□□□ 0.89
SNCAIP-212ENST00000509154 CCDC180Q9P1Z9 1646 aa20.6■□□□□ 0.89
SNCAIP-212ENST00000509154 MYO15BQ96JP2 1530 aa20.56■□□□□ 0.88
SNCAIP-212ENST00000509154 CHIC1Q5VXU3 224 aa20.5■□□□□ 0.87
SNCAIP-212ENST00000509154 HRCP23327 699 aa20.24■□□□□ 0.83
SNCAIP-212ENST00000509154 PCGF6Q9BYE7 350 aa20.21■□□□□ 0.83
SNCAIP-212ENST00000509154 LOC105371045A0A1W2PR82 267 aa20.04■□□□□ 0.8
SNCAIP-212ENST00000509154 PPARGC1BQ86YN6 1023 aaKnown RBP20■□□□□ 0.79
SNCAIP-212ENST00000509154 DCAF1Q9Y4B6 1507 aa19.98■□□□□ 0.79
SNCAIP-212ENST00000509154 ABCC9O60706 1549 aa19.67■□□□□ 0.74
SNCAIP-212ENST00000509154 SCRIBQ14160 1630 aa19.63■□□□□ 0.73
SNCAIP-212ENST00000509154 RSF1Q96T23 1441 aaPredicted RBP19.6■□□□□ 0.73
SNCAIP-212ENST00000509154 TRIM26Q12899 539 aaPredicted RBP19.6■□□□□ 0.73
SNCAIP-212ENST00000509154 FAM9AQ8IZU1 332 aaPredicted RBP19.55■□□□□ 0.72
SNCAIP-212ENST00000509154 TRIM41Q8WV44 630 aa19.52■□□□□ 0.71
SNCAIP-212ENST00000509154 EHMT2Q96KQ7 1210 aa19.52■□□□□ 0.71
SNCAIP-212ENST00000509154 RB1CC1Q8TDY2 1594 aa19.47■□□□□ 0.71
SNCAIP-212ENST00000509154 CECR2Q9BXF3 1484 aa19.3■□□□□ 0.68
SNCAIP-212ENST00000509154 MROH2BQ7Z745 1585 aa19.2■□□□□ 0.66
SNCAIP-212ENST00000509154 ZEB1P37275 1124 aaPredicted RBP19.15■□□□□ 0.66
SNCAIP-212ENST00000509154 WIZO95785 1651 aa19.1■□□□□ 0.65
SNCAIP-212ENST00000509154 NACADO15069 1562 aa19.05■□□□□ 0.64
SNCAIP-212ENST00000509154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.95■□□□□ 0.62
SNCAIP-212ENST00000509154 TTBK1Q5TCY1 1321 aaPredicted RBP18.92■□□□□ 0.62
SNCAIP-212ENST00000509154 BAZ1AQ9NRL2 1556 aaPredicted RBP18.89■□□□□ 0.61
SNCAIP-212ENST00000509154 SCAF1Q9H7N4 1312 aaKnown RBP18.88■□□□□ 0.61
SNCAIP-212ENST00000509154 EIF4G1Q04637 1599 aaKnown RBP18.85■□□□□ 0.61
SNCAIP-212ENST00000509154 ABCC8Q09428 1581 aa18.83■□□□□ 0.61
SNCAIP-212ENST00000509154 CCER1Q8TC90 406 aaPredicted RBP18.83■□□□□ 0.6
SNCAIP-212ENST00000509154 CCDC88BA6NC98 1476 aa18.8■□□□□ 0.6
SNCAIP-212ENST00000509154 SOGA1O94964 1423 aa18.71■□□□□ 0.59
SNCAIP-212ENST00000509154 TOP2AP11388 1531 aaKnown RBP18.7■□□□□ 0.58
SNCAIP-212ENST00000509154 CEP162Q5TB80 1403 aa18.67■□□□□ 0.58
SNCAIP-212ENST00000509154 SMARCA2P51531 1590 aa18.65■□□□□ 0.58
SNCAIP-212ENST00000509154 SMARCA4P51532 1647 aa18.65■□□□□ 0.58
SNCAIP-212ENST00000509154 RUSC2Q8N2Y8 1516 aa18.64■□□□□ 0.57
SNCAIP-212ENST00000509154 UBTFP17480 764 aaKnown RBP18.59■□□□□ 0.57
SNCAIP-212ENST00000509154 WRNQ14191 1432 aaPredicted RBP eCLIP18.59■□□□□ 0.57
SNCAIP-212ENST00000509154 NEUROD1Q13562 356 aa18.59■□□□□ 0.57
SNCAIP-212ENST00000509154 DIEXFQ68CQ4 756 aaKnown RBP18.56■□□□□ 0.56
SNCAIP-212ENST00000509154 CSRNP3Q8WYN3 585 aa18.56■□□□□ 0.56
SNCAIP-212ENST00000509154 PABPN1Q86U42 306 aaKnown RBP eCLIP18.55■□□□□ 0.56
SNCAIP-212ENST00000509154 TNIKQ9UKE5 1360 aa18.54■□□□□ 0.56
SNCAIP-212ENST00000509154 ACIN1Q9UKV3 1341 aaKnown RBP18.54■□□□□ 0.56
SNCAIP-212ENST00000509154 UNC13AQ9UPW8 1703 aa18.5■□□□□ 0.55
SNCAIP-212ENST00000509154 PELP1Q8IZL8 1130 aaKnown RBP18.46■□□□□ 0.55
SNCAIP-212ENST00000509154 EEA1Q15075 1411 aa18.41■□□□□ 0.54
SNCAIP-212ENST00000509154 GTF3C3Q9Y5Q9 886 aa18.41■□□□□ 0.54
SNCAIP-212ENST00000509154 GOLGA3Q08378 1498 aa18.4■□□□□ 0.54
SNCAIP-212ENST00000509154 HNRNPUL2Q1KMD3 747 aaKnown RBP18.39■□□□□ 0.53
SNCAIP-212ENST00000509154 RANGAP1P46060 587 aaPredicted RBP18.36■□□□□ 0.53
SNCAIP-212ENST00000509154 CENPBP07199 599 aaPredicted RBP18.33■□□□□ 0.52
SNCAIP-212ENST00000509154 SYNJ1O43426 1573 aa18.32■□□□□ 0.52
SNCAIP-212ENST00000509154 ZNF316A6NFI3 1004 aaPredicted RBP18.31■□□□□ 0.52
SNCAIP-212ENST00000509154 BICRAQ9NZM4 1560 aa18.3■□□□□ 0.52
SNCAIP-212ENST00000509154 YTHDC1Q96MU7 727 aaKnown RBP18.3■□□□□ 0.52
SNCAIP-212ENST00000509154 CLIP1P30622 1438 aa18.26■□□□□ 0.51
SNCAIP-212ENST00000509154 CEP164Q9UPV0 1460 aa18.25■□□□□ 0.51
SNCAIP-212ENST00000509154 RAPGEF2Q9Y4G8 1499 aa18.21■□□□□ 0.51
SNCAIP-212ENST00000509154 MIER1Q8N108 512 aa18.19■□□□□ 0.5
SNCAIP-212ENST00000509154 KIF21BO75037 1637 aa18.18■□□□□ 0.5
SNCAIP-212ENST00000509154 PEG3Q9GZU2 1588 aa18.18■□□□□ 0.5
SNCAIP-212ENST00000509154 VPS8Q8N3P4 1428 aa18.17■□□□□ 0.5
SNCAIP-212ENST00000509154 ATAD2BQ9ULI0 1458 aa18.16■□□□□ 0.5
SNCAIP-212ENST00000509154 APLP2Q06481 763 aa18.14■□□□□ 0.5
SNCAIP-212ENST00000509154 BAZ1BQ9UIG0 1483 aaKnown RBP18.13■□□□□ 0.49
SNCAIP-212ENST00000509154 SLC24A1O60721 1099 aa18.08■□□□□ 0.48
SNCAIP-212ENST00000509154 KANK4Q5T7N3 995 aaPredicted RBP17.99■□□□□ 0.47
SNCAIP-212ENST00000509154 TOP2BQ02880 1626 aa17.97■□□□□ 0.47
SNCAIP-212ENST00000509154 ARAP1Q96P48 1450 aa17.94■□□□□ 0.46
SNCAIP-212ENST00000509154 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
SNCAIP-212ENST00000509154 PRXQ9BXM0 1461 aa17.9■□□□□ 0.46
SNCAIP-212ENST00000509154 ITGAEP38570 1179 aa17.86■□□□□ 0.45
SNCAIP-212ENST00000509154 BIVM-ERCC5R4GMW8 1640 aa17.85■□□□□ 0.45
SNCAIP-212ENST00000509154 ERICH3Q5RHP9 1530 aa17.84■□□□□ 0.45
SNCAIP-212ENST00000509154 CUX1P39880 1505 aa17.83■□□□□ 0.45
SNCAIP-212ENST00000509154 CLSPNQ9HAW4 1339 aa17.77■□□□□ 0.44
SNCAIP-212ENST00000509154 KIF27Q86VH2 1401 aa17.77■□□□□ 0.43
SNCAIP-212ENST00000509154 RRBP1Q9P2E9 1410 aaKnown RBP17.76■□□□□ 0.43
SNCAIP-212ENST00000509154 ARHGAP35Q9NRY4 1499 aa17.75■□□□□ 0.43
SNCAIP-212ENST00000509154 CCNB3Q8WWL7 1395 aa17.73■□□□□ 0.43
SNCAIP-212ENST00000509154 NCAPD3P42695 1498 aa17.7■□□□□ 0.42
SNCAIP-212ENST00000509154 KCNH8Q96L42 1107 aa17.66■□□□□ 0.42
SNCAIP-212ENST00000509154 HMGXB3Q12766 1538 aa17.66■□□□□ 0.42
SNCAIP-212ENST00000509154 CFTRP13569 1480 aa17.66■□□□□ 0.42
SNCAIP-212ENST00000509154 SUPT16HQ9Y5B9 1047 aaKnown RBP17.65■□□□□ 0.42
SNCAIP-212ENST00000509154 RAB3GAP2Q9H2M9 1393 aa17.64■□□□□ 0.42
SNCAIP-212ENST00000509154 CUX2O14529 1486 aa17.63■□□□□ 0.41
SNCAIP-212ENST00000509154 IGF1RP08069 1367 aa17.61■□□□□ 0.41
SNCAIP-212ENST00000509154 P3H3Q8IVL6 736 aa17.6■□□□□ 0.41
SNCAIP-212ENST00000509154 MYT1Q01538 1121 aa17.59■□□□□ 0.41
SNCAIP-212ENST00000509154 MAPKBP1O60336 1514 aa17.58■□□□□ 0.4
SNCAIP-212ENST00000509154 SIN3AQ96ST3 1273 aa17.57■□□□□ 0.4
SNCAIP-212ENST00000509154 FAM50AQ14320 339 aaKnown RBP17.56■□□□□ 0.4
SNCAIP-212ENST00000509154 ATP1B4Q9UN42 357 aaPredicted RBP17.56■□□□□ 0.4
SNCAIP-212ENST00000509154 PHLDB1Q86UU1 1377 aa17.56■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms