RNA–Protein interactions for RNA: ENST00000504897.2

WDR55-202, Transcript of WD repeat domain 55, humanhuman

TSL 2

Gene WDR55, Length 2,953 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
WDR55-202ENST00000504897 NISCHQ9Y2I1 1504 aa30.11■■■□□ 2.41
WDR55-202ENST00000504897 SHROOM4Q9ULL8 1493 aa26.35■■□□□ 1.81
WDR55-202ENST00000504897 SUPT5HO00267 1087 aaKnown RBP25.94■■□□□ 1.74
WDR55-202ENST00000504897 CCDC180Q9P1Z9 1646 aa25.5■■□□□ 1.67
WDR55-202ENST00000504897 ZCCHC6Q5VYS8 1495 aaKnown RBP25.48■■□□□ 1.67
WDR55-202ENST00000504897 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
WDR55-202ENST00000504897 MYO15BQ96JP2 1530 aa25.13■■□□□ 1.61
WDR55-202ENST00000504897 CHIC1Q5VXU3 224 aa25.11■■□□□ 1.61
WDR55-202ENST00000504897 HRCP23327 699 aa24.96■■□□□ 1.59
WDR55-202ENST00000504897 PCGF6Q9BYE7 350 aa24.93■■□□□ 1.58
WDR55-202ENST00000504897 PPARGC1BQ86YN6 1023 aaKnown RBP24.77■■□□□ 1.56
WDR55-202ENST00000504897 LOC105371045A0A1W2PR82 267 aa24.59■■□□□ 1.53
WDR55-202ENST00000504897 DCAF1Q9Y4B6 1507 aa24.49■■□□□ 1.51
WDR55-202ENST00000504897 SCRIBQ14160 1630 aa24.11■■□□□ 1.45
WDR55-202ENST00000504897 ABCC9O60706 1549 aa24.09■■□□□ 1.45
WDR55-202ENST00000504897 FAM9AQ8IZU1 332 aaPredicted RBP24.05■■□□□ 1.44
WDR55-202ENST00000504897 EHMT2Q96KQ7 1210 aa24.04■■□□□ 1.44
WDR55-202ENST00000504897 TRIM26Q12899 539 aaPredicted RBP24.02■■□□□ 1.44
WDR55-202ENST00000504897 RSF1Q96T23 1441 aaPredicted RBP24.01■■□□□ 1.43
WDR55-202ENST00000504897 TRIM41Q8WV44 630 aa23.98■■□□□ 1.43
WDR55-202ENST00000504897 RB1CC1Q8TDY2 1594 aa23.86■■□□□ 1.41
WDR55-202ENST00000504897 CECR2Q9BXF3 1484 aa23.67■■□□□ 1.38
WDR55-202ENST00000504897 NACADO15069 1562 aa23.62■■□□□ 1.37
WDR55-202ENST00000504897 ZEB1P37275 1124 aaPredicted RBP23.55■■□□□ 1.36
WDR55-202ENST00000504897 MROH2BQ7Z745 1585 aa23.54■■□□□ 1.36
WDR55-202ENST00000504897 SCAF1Q9H7N4 1312 aaKnown RBP23.47■■□□□ 1.35
WDR55-202ENST00000504897 WIZO95785 1651 aa23.45■■□□□ 1.34
WDR55-202ENST00000504897 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.29■■□□□ 1.32
WDR55-202ENST00000504897 TTBK1Q5TCY1 1321 aaPredicted RBP23.29■■□□□ 1.32
WDR55-202ENST00000504897 PELP1Q8IZL8 1130 aaKnown RBP23.19■■□□□ 1.3
WDR55-202ENST00000504897 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
WDR55-202ENST00000504897 BAZ1AQ9NRL2 1556 aaPredicted RBP23.14■■□□□ 1.3
WDR55-202ENST00000504897 ABCC8Q09428 1581 aa23.11■■□□□ 1.29
WDR55-202ENST00000504897 EIF4G1Q04637 1599 aaKnown RBP23.03■■□□□ 1.28
WDR55-202ENST00000504897 CCDC88BA6NC98 1476 aa23.03■■□□□ 1.28
WDR55-202ENST00000504897 NEUROD1Q13562 356 aa23.03■■□□□ 1.28
WDR55-202ENST00000504897 UNC13AQ9UPW8 1703 aa23■■□□□ 1.27
WDR55-202ENST00000504897 ACIN1Q9UKV3 1341 aaKnown RBP22.97■■□□□ 1.27
WDR55-202ENST00000504897 SOGA1O94964 1423 aa22.93■■□□□ 1.26
WDR55-202ENST00000504897 TOP2AP11388 1531 aaKnown RBP22.91■■□□□ 1.26
WDR55-202ENST00000504897 DIEXFQ68CQ4 756 aaKnown RBP22.91■■□□□ 1.26
WDR55-202ENST00000504897 GTF3C3Q9Y5Q9 886 aa22.89■■□□□ 1.25
WDR55-202ENST00000504897 UBTFP17480 764 aaKnown RBP22.88■■□□□ 1.25
WDR55-202ENST00000504897 SMARCA4P51532 1647 aa22.88■■□□□ 1.25
WDR55-202ENST00000504897 CEP162Q5TB80 1403 aa22.87■■□□□ 1.25
WDR55-202ENST00000504897 SMARCA2P51531 1590 aa22.86■■□□□ 1.25
WDR55-202ENST00000504897 PABPN1Q86U42 306 aaKnown RBP eCLIP22.84■■□□□ 1.25
WDR55-202ENST00000504897 RUSC2Q8N2Y8 1516 aa22.84■■□□□ 1.25
WDR55-202ENST00000504897 CSRNP3Q8WYN3 585 aa22.78■■□□□ 1.24
WDR55-202ENST00000504897 CENPBP07199 599 aaPredicted RBP22.75■■□□□ 1.23
WDR55-202ENST00000504897 YTHDC1Q96MU7 727 aaKnown RBP22.75■■□□□ 1.23
WDR55-202ENST00000504897 WRNQ14191 1432 aaPredicted RBP eCLIP22.72■■□□□ 1.23
WDR55-202ENST00000504897 TNIKQ9UKE5 1360 aa22.71■■□□□ 1.23
WDR55-202ENST00000504897 BICRAQ9NZM4 1560 aa22.67■■□□□ 1.22
WDR55-202ENST00000504897 RANGAP1P46060 587 aaPredicted RBP22.63■■□□□ 1.21
WDR55-202ENST00000504897 HNRNPUL2Q1KMD3 747 aaKnown RBP22.59■■□□□ 1.21
WDR55-202ENST00000504897 GOLGA3Q08378 1498 aa22.56■■□□□ 1.2
WDR55-202ENST00000504897 EEA1Q15075 1411 aa22.55■■□□□ 1.2
WDR55-202ENST00000504897 ZNF316A6NFI3 1004 aaPredicted RBP22.5■■□□□ 1.19
WDR55-202ENST00000504897 SYNJ1O43426 1573 aa22.44■■□□□ 1.18
WDR55-202ENST00000504897 MIER1Q8N108 512 aa22.41■■□□□ 1.18
WDR55-202ENST00000504897 CLIP1P30622 1438 aa22.4■■□□□ 1.18
WDR55-202ENST00000504897 CEP164Q9UPV0 1460 aa22.38■■□□□ 1.17
WDR55-202ENST00000504897 PEG3Q9GZU2 1588 aa22.35■■□□□ 1.17
WDR55-202ENST00000504897 APLP2Q06481 763 aa22.35■■□□□ 1.17
WDR55-202ENST00000504897 RAPGEF2Q9Y4G8 1499 aa22.32■■□□□ 1.16
WDR55-202ENST00000504897 ATAD2BQ9ULI0 1458 aa22.29■■□□□ 1.16
WDR55-202ENST00000504897 BAZ1BQ9UIG0 1483 aaKnown RBP22.27■■□□□ 1.16
WDR55-202ENST00000504897 KIF21BO75037 1637 aa22.26■■□□□ 1.15
WDR55-202ENST00000504897 VPS8Q8N3P4 1428 aa22.26■■□□□ 1.15
WDR55-202ENST00000504897 KANK4Q5T7N3 995 aaPredicted RBP22.06■■□□□ 1.12
WDR55-202ENST00000504897 MYT1Q01538 1121 aa22.05■■□□□ 1.12
WDR55-202ENST00000504897 TOP2BQ02880 1626 aa22.03■■□□□ 1.12
WDR55-202ENST00000504897 ITGAEP38570 1179 aa21.99■■□□□ 1.11
WDR55-202ENST00000504897 ARAP1Q96P48 1450 aa21.95■■□□□ 1.1
WDR55-202ENST00000504897 DHX57Q6P158 1386 aaKnown RBP21.94■■□□□ 1.1
WDR55-202ENST00000504897 PRXQ9BXM0 1461 aa21.92■■□□□ 1.1
WDR55-202ENST00000504897 BIVM-ERCC5R4GMW8 1640 aa21.89■■□□□ 1.09
WDR55-202ENST00000504897 CUX1P39880 1505 aa21.86■■□□□ 1.09
WDR55-202ENST00000504897 NCAPD3P42695 1498 aa21.85■■□□□ 1.09
WDR55-202ENST00000504897 ERICH3Q5RHP9 1530 aa21.84■■□□□ 1.09
WDR55-202ENST00000504897 HMGXB3Q12766 1538 aa21.84■■□□□ 1.09
WDR55-202ENST00000504897 KIF27Q86VH2 1401 aa21.82■■□□□ 1.08
WDR55-202ENST00000504897 SUPT16HQ9Y5B9 1047 aaKnown RBP21.8■■□□□ 1.08
WDR55-202ENST00000504897 CLSPNQ9HAW4 1339 aa21.75■■□□□ 1.07
WDR55-202ENST00000504897 ARHGAP35Q9NRY4 1499 aa21.74■■□□□ 1.07
WDR55-202ENST00000504897 CCNB3Q8WWL7 1395 aa21.73■■□□□ 1.07
WDR55-202ENST00000504897 RRBP1Q9P2E9 1410 aaKnown RBP21.72■■□□□ 1.07
WDR55-202ENST00000504897 KCNH8Q96L42 1107 aa21.71■■□□□ 1.07
WDR55-202ENST00000504897 BCANQ96GW7 911 aa21.7■■□□□ 1.06
WDR55-202ENST00000504897 ATP1B4Q9UN42 357 aaPredicted RBP21.67■■□□□ 1.06
WDR55-202ENST00000504897 P3H3Q8IVL6 736 aa21.66■■□□□ 1.06
WDR55-202ENST00000504897 CUX2O14529 1486 aa21.65■■□□□ 1.06
WDR55-202ENST00000504897 CFTRP13569 1480 aa21.65■■□□□ 1.06
WDR55-202ENST00000504897 RAB3GAP2Q9H2M9 1393 aa21.62■■□□□ 1.05
WDR55-202ENST00000504897 FAM50AQ14320 339 aaKnown RBP21.6■■□□□ 1.05
WDR55-202ENST00000504897 IGF1RP08069 1367 aa21.59■■□□□ 1.05
WDR55-202ENST00000504897 TSHZ2Q9NRE2 1034 aa21.58■■□□□ 1.04
WDR55-202ENST00000504897 SIN3AQ96ST3 1273 aa21.56■■□□□ 1.04
WDR55-202ENST00000504897 CARMIL1Q5VZK9 1371 aa21.53■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms